RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 LYPD1Q8N2G4 141 aa16.83■□□□□ 0.28
VARS-217ENST00000440048 IGHV4-4A0A075B6R2 117 aa16.82■□□□□ 0.28
VARS-217ENST00000440048 LGALS9CQ6DKI2 356 aa16.82■□□□□ 0.28
VARS-217ENST00000440048 FAM19A4Q96LR4 140 aa16.82■□□□□ 0.28
VARS-217ENST00000440048 VGLL1Q99990 258 aa16.82■□□□□ 0.28
VARS-217ENST00000440048 Q9H3A6 140 aa16.82■□□□□ 0.28
VARS-217ENST00000440048 VPS13DQ5THJ4 4388 aa16.81■□□□□ 0.28
VARS-217ENST00000440048 TRAV12-3A0A0B4J271 114 aa16.81■□□□□ 0.28
VARS-217ENST00000440048 PQLC2Q6ZP29 291 aa16.81■□□□□ 0.28
VARS-217ENST00000440048 SH3BGRL3Q9H299 93 aa16.81■□□□□ 0.28
VARS-217ENST00000440048 LYRM9A8MSI8 78 aa16.8■□□□□ 0.28
VARS-217ENST00000440048 HMGB3O15347 200 aaKnown RBP16.8■□□□□ 0.28
VARS-217ENST00000440048 DAD1P61803 113 aa16.8■□□□□ 0.28
VARS-217ENST00000440048 TMEM78Q5T7P6 136 aa16.8■□□□□ 0.28
VARS-217ENST00000440048 RPL7L1Q6DKI1 246 aaKnown RBP16.8■□□□□ 0.28
VARS-217ENST00000440048 C16orf74Q96GX8 76 aa16.8■□□□□ 0.28
VARS-217ENST00000440048 SLC25A5P05141 298 aaKnown RBP16.79■□□□□ 0.28
VARS-217ENST00000440048 CSN1S1P47710 185 aa16.79■□□□□ 0.28
VARS-217ENST00000440048 CDC34P49427 236 aaPredicted RBP16.79■□□□□ 0.28
VARS-217ENST00000440048 SERF2P84101 59 aa16.79■□□□□ 0.28
VARS-217ENST00000440048 RNASE8Q8TDE3 154 aaKnown RBP16.79■□□□□ 0.28
VARS-217ENST00000440048 KMT2AQ03164 3969 aa16.79■□□□□ 0.28
VARS-217ENST00000440048 BORCS7-ASMTA0A0B4J1R7 106 aa16.78■□□□□ 0.28
VARS-217ENST00000440048 C7orf71A4D174 169 aa16.78■□□□□ 0.28
VARS-217ENST00000440048 KLLNB2CW77 178 aa16.78■□□□□ 0.28
VARS-217ENST00000440048 SMLR1H3BR10 107 aa16.78■□□□□ 0.28
VARS-217ENST00000440048 CRISP2P16562 243 aa16.78■□□□□ 0.28
VARS-217ENST00000440048 ZNF493Q6ZR52 646 aa16.78■□□□□ 0.28
VARS-217ENST00000440048 TMEM263Q8WUH6 116 aaKnown RBP16.78■□□□□ 0.28
VARS-217ENST00000440048 ZNF492Q9P255 531 aa16.78■□□□□ 0.28
VARS-217ENST00000440048 MBP02144 154 aa16.77■□□□□ 0.28
VARS-217ENST00000440048 HTN3P15516 51 aa16.77■□□□□ 0.28
VARS-217ENST00000440048 CD300CQ08708 224 aa16.77■□□□□ 0.28
VARS-217ENST00000440048 BTN1A1Q13410 526 aa16.77■□□□□ 0.28
VARS-217ENST00000440048 OTORQ9NRC9 128 aa16.77■□□□□ 0.28
VARS-217ENST00000440048 ARPC5O15511 151 aa16.76■□□□□ 0.27
VARS-217ENST00000440048 ARL14EPLP0DKL9 152 aa16.76■□□□□ 0.27
VARS-217ENST00000440048 CCDC28AQ8IWP9 274 aa16.76■□□□□ 0.27
VARS-217ENST00000440048 RAB24Q969Q5 203 aa16.76■□□□□ 0.27
VARS-217ENST00000440048 GNPNAT1Q96EK6 184 aaPredicted RBP16.76■□□□□ 0.27
VARS-217ENST00000440048 TIMM8BQ9Y5J9 83 aaPredicted RBP16.76■□□□□ 0.27
VARS-217ENST00000440048 RBAKDNA6NC62 111 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 PGPA6NDG6 321 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 DIRC3C9JPN6 131 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 ZNF324O75467 553 aaPredicted RBP16.75■□□□□ 0.27
VARS-217ENST00000440048 NMBP08949 121 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 STAG3L2P0CL84 134 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 STAG3L3P0CL85 134 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 DEFB130BP0DP73 79 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 DEFB130AP0DP74 79 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 RNASE4P34096 147 aaKnown RBP16.75■□□□□ 0.27
VARS-217ENST00000440048 ZNF138P52744 262 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 ZFAND2AQ8N6M9 145 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 Q8TAT8 98 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 RXFP4Q8TDU9 374 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 HYLS1Q96M11 299 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 PYGO2Q9BRQ0 406 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 NDUFAF3Q9BU61 184 aa16.75■□□□□ 0.27
VARS-217ENST00000440048 GPX1P07203 203 aa16.74■□□□□ 0.27
VARS-217ENST00000440048 PRR9Q5T870 116 aa16.74■□□□□ 0.27
VARS-217ENST00000440048 NOP10Q9NPE3 64 aaKnown RBP16.74■□□□□ 0.27
VARS-217ENST00000440048 TAAR5O14804 337 aa16.73■□□□□ 0.27
VARS-217ENST00000440048 FAM210BQ96KR6 192 aa16.73■□□□□ 0.27
VARS-217ENST00000440048 ACTR3CQ9C0K3 210 aaPredicted RBP16.73■□□□□ 0.27
VARS-217ENST00000440048 TRBV7-9A0A0J9YWB2 115 aa16.72■□□□□ 0.27
VARS-217ENST00000440048 GCHFRP30047 84 aa16.72■□□□□ 0.27
VARS-217ENST00000440048 FAM74A1Q5RGS3 127 aa16.72■□□□□ 0.27
VARS-217ENST00000440048 CMTM2Q8TAZ6 248 aa16.72■□□□□ 0.27
VARS-217ENST00000440048 CYTL1Q9NRR1 136 aa16.72■□□□□ 0.27
VARS-217ENST00000440048 EPPK1P58107 5090 aaKnown RBP16.72■□□□□ 0.27
VARS-217ENST00000440048 SSX7Q7RTT5 188 aa16.71■□□□□ 0.27
VARS-217ENST00000440048 SUN5Q8TC36 379 aa16.71■□□□□ 0.27
VARS-217ENST00000440048 RPH3ALQ9UNE2 315 aa16.71■□□□□ 0.27
VARS-217ENST00000440048 DNAH6Q9C0G6 4158 aa16.7■□□□□ 0.26
VARS-217ENST00000440048 ARL6IP6Q8N6S5 226 aa16.7■□□□□ 0.26
VARS-217ENST00000440048 LINC00467Q9BRT7 94 aa16.7■□□□□ 0.26
VARS-217ENST00000440048 CBY3A6NI87 242 aa16.69■□□□□ 0.26
VARS-217ENST00000440048 SNURFLB1AK76 121 aa16.69■□□□□ 0.26
VARS-217ENST00000440048 CXorf1O96002 111 aa16.69■□□□□ 0.26
VARS-217ENST00000440048 Q6ZQT7 251 aa16.69■□□□□ 0.26
VARS-217ENST00000440048 OR11H4Q8NGC9 324 aa16.69■□□□□ 0.26
VARS-217ENST00000440048 ZNF726P1Q15940 193 aa16.68■□□□□ 0.26
VARS-217ENST00000440048 TMEM88Q6PEY1 159 aa16.68■□□□□ 0.26
VARS-217ENST00000440048 GOLT1AQ6ZVE7 132 aa16.68■□□□□ 0.26
VARS-217ENST00000440048 KCNRGQ8N5I3 272 aa16.68■□□□□ 0.26
VARS-217ENST00000440048 EIF4E3Q8N5X7 224 aaKnown RBP16.68■□□□□ 0.26
VARS-217ENST00000440048 TMED6Q8WW62 240 aa16.68■□□□□ 0.26
VARS-217ENST00000440048 LENEPQ9Y5L5 61 aa16.68■□□□□ 0.26
VARS-217ENST00000440048 ATP5G1P05496 136 aa16.67■□□□□ 0.26
VARS-217ENST00000440048 ATP5G3P48201 142 aa16.67■□□□□ 0.26
VARS-217ENST00000440048 GNG5P63218 68 aa16.67■□□□□ 0.26
VARS-217ENST00000440048 ZNF345Q14585 488 aa16.67■□□□□ 0.26
VARS-217ENST00000440048 ANXA2RQ3ZCQ2 193 aa16.67■□□□□ 0.26
VARS-217ENST00000440048 LINC00612Q8N6U2 182 aa16.67■□□□□ 0.26
VARS-217ENST00000440048 ST6GAL2Q96JF0 529 aa16.67■□□□□ 0.26
VARS-217ENST00000440048 TMEM167BQ9NRX6 74 aa16.67■□□□□ 0.26
VARS-217ENST00000440048 HMSDA8MTL9 139 aa16.66■□□□□ 0.26
VARS-217ENST00000440048 RGS13O14921 159 aa16.66■□□□□ 0.26
VARS-217ENST00000440048 AKR1C8PQ5T2L2 129 aa16.66■□□□□ 0.26
VARS-217ENST00000440048 C11orf72Q8NBR9 251 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 616.7 ms