RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 BCL2P10415 239 aa12.89□□□□□ -0.35
CCDC188-201ENST00000439765 TAGLN2P37802 199 aaKnown RBP12.89□□□□□ -0.35
CCDC188-201ENST00000439765 EBLN2Q6P2I7 272 aa12.89□□□□□ -0.35
CCDC188-201ENST00000439765 VAX2Q9UIW0 290 aa12.89□□□□□ -0.35
CCDC188-201ENST00000439765 A0A0J9YWU9 116 aa12.88□□□□□ -0.35
CCDC188-201ENST00000439765 A0A0J9YX75 114 aa12.88□□□□□ -0.35
CCDC188-201ENST00000439765 LOC102723971A0A1B0GUV8 181 aa12.88□□□□□ -0.35
CCDC188-201ENST00000439765 ATP5G3P48201 142 aa12.88□□□□□ -0.35
CCDC188-201ENST00000439765 FXYD7P58549 80 aa12.88□□□□□ -0.35
CCDC188-201ENST00000439765 CCDC28AQ8IWP9 274 aa12.88□□□□□ -0.35
CCDC188-201ENST00000439765 OR11H2Q8NH07 326 aa12.88□□□□□ -0.35
CCDC188-201ENST00000439765 RARRES2Q99969 163 aa12.88□□□□□ -0.35
CCDC188-201ENST00000439765 TXNDC17Q9BRA2 123 aa12.88□□□□□ -0.35
CCDC188-201ENST00000439765 XCL2Q9UBD3 114 aa12.88□□□□□ -0.35
CCDC188-201ENST00000439765 DNAH1Q9P2D7 4330 aa12.87□□□□□ -0.35
CCDC188-201ENST00000439765 C11orf94C9JXX5 98 aa12.87□□□□□ -0.35
CCDC188-201ENST00000439765 M0R3E3 92 aa12.87□□□□□ -0.35
CCDC188-201ENST00000439765 ZNF705DP0CH99 300 aaPredicted RBP12.87□□□□□ -0.35
CCDC188-201ENST00000439765 ZNF705BP0CI00 300 aaPredicted RBP12.87□□□□□ -0.35
CCDC188-201ENST00000439765 NUTF2P61970 127 aaKnown RBP12.87□□□□□ -0.35
CCDC188-201ENST00000439765 TOR2AQ5JU69 321 aa12.87□□□□□ -0.35
CCDC188-201ENST00000439765 ZNF506Q5JVG8 444 aa12.87□□□□□ -0.35
CCDC188-201ENST00000439765 MRPL53Q96EL3 112 aaKnown RBP12.87□□□□□ -0.35
CCDC188-201ENST00000439765 EIF5A2Q9GZV4 153 aaKnown RBP12.87□□□□□ -0.35
CCDC188-201ENST00000439765 MED9Q9NWA0 146 aa12.87□□□□□ -0.35
CCDC188-201ENST00000439765 LINC00862A6NCI5 91 aa12.86□□□□□ -0.35
CCDC188-201ENST00000439765 ZNF705FA8MVS1 300 aaPredicted RBP12.86□□□□□ -0.35
CCDC188-201ENST00000439765 SLC25A5P05141 298 aaKnown RBP12.86□□□□□ -0.35
CCDC188-201ENST00000439765 MEF2BQ02080 365 aaPredicted RBP12.86□□□□□ -0.35
CCDC188-201ENST00000439765 ARL6IP6Q8N6S5 226 aa12.86□□□□□ -0.35
CCDC188-201ENST00000439765 C5orf17Q8NAS9 161 aa12.86□□□□□ -0.35
CCDC188-201ENST00000439765 CMTM2Q8TAZ6 248 aa12.86□□□□□ -0.35
CCDC188-201ENST00000439765 RXFP4Q8TDU9 374 aa12.86□□□□□ -0.35
CCDC188-201ENST00000439765 SLC35B3Q9H1N7 401 aa12.86□□□□□ -0.35
CCDC188-201ENST00000439765 CSN1S1P47710 185 aa12.85□□□□□ -0.35
CCDC188-201ENST00000439765 RPUSD4Q96CM3 377 aaKnown RBP12.85□□□□□ -0.35
CCDC188-201ENST00000439765 EPDR1Q9UM22 224 aa12.85□□□□□ -0.35
CCDC188-201ENST00000439765 RAB19A4D1S5 217 aa12.85□□□□□ -0.35
CCDC188-201ENST00000439765 CNN1P51911 297 aaKnown RBP12.85□□□□□ -0.35
CCDC188-201ENST00000439765 TCEAL7Q9BRU2 100 aa12.85□□□□□ -0.35
CCDC188-201ENST00000439765 C1QTNF4Q9BXJ3 329 aa12.85□□□□□ -0.35
CCDC188-201ENST00000439765 DIRC3C9JPN6 131 aa12.84□□□□□ -0.35
CCDC188-201ENST00000439765 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
CCDC188-201ENST00000439765 DEFB4AO15263 64 aa12.84□□□□□ -0.35
CCDC188-201ENST00000439765 GNG5P63218 68 aa12.84□□□□□ -0.35
CCDC188-201ENST00000439765 HIST1H1AQ02539 215 aaPredicted RBP12.84□□□□□ -0.35
CCDC188-201ENST00000439765 CSNK1G2-AS1Q8NCQ2 148 aa12.84□□□□□ -0.35
CCDC188-201ENST00000439765 PDE6DO43924 150 aa12.83□□□□□ -0.36
CCDC188-201ENST00000439765 NDUFS6O75380 124 aaKnown RBP12.83□□□□□ -0.36
CCDC188-201ENST00000439765 TCRAP04437 139 aa12.83□□□□□ -0.36
CCDC188-201ENST00000439765 SRSF3P84103 164 aaKnown RBP12.83□□□□□ -0.36
CCDC188-201ENST00000439765 PEA15Q15121 130 aa12.83□□□□□ -0.36
CCDC188-201ENST00000439765 HIST1H2BAQ96A08 127 aa12.83□□□□□ -0.36
CCDC188-201ENST00000439765 SMDT1Q9H4I9 107 aa12.83□□□□□ -0.36
CCDC188-201ENST00000439765 RPH3ALQ9UNE2 315 aa12.83□□□□□ -0.36
CCDC188-201ENST00000439765 F6UZH7 168 aa12.82□□□□□ -0.36
CCDC188-201ENST00000439765 OR8A1Q8NGG7 326 aa12.82□□□□□ -0.36
CCDC188-201ENST00000439765 CLUHP3Q96NS8 147 aa12.82□□□□□ -0.36
CCDC188-201ENST00000439765 ATG101Q9BSB4 218 aa12.82□□□□□ -0.36
CCDC188-201ENST00000439765 SCO2A0A1W2PP80 73 aa12.81□□□□□ -0.36
CCDC188-201ENST00000439765 A8MTW9 85 aa12.81□□□□□ -0.36
CCDC188-201ENST00000439765 PEX7O00628 323 aa12.81□□□□□ -0.36
CCDC188-201ENST00000439765 DUSP14O95147 198 aaKnown RBP12.81□□□□□ -0.36
CCDC188-201ENST00000439765 AMTNQ6UX39 209 aa12.81□□□□□ -0.36
CCDC188-201ENST00000439765 COMMD7Q86VX2 200 aa12.81□□□□□ -0.36
CCDC188-201ENST00000439765 X6R8D5 127 aa12.81□□□□□ -0.36
CCDC188-201ENST00000439765 HYDINQ4G0P3 5121 aa12.8□□□□□ -0.36
CCDC188-201ENST00000439765 PLECQ15149 4684 aaKnown RBP12.8□□□□□ -0.36
CCDC188-201ENST00000439765 IGHV3OR16-12A0A075B7B8 117 aa12.8□□□□□ -0.36
CCDC188-201ENST00000439765 SERTM2A0A1B0GWG4 89 aa12.8□□□□□ -0.36
CCDC188-201ENST00000439765 M0R2Z0 102 aa12.8□□□□□ -0.36
CCDC188-201ENST00000439765 SRP19P09132 144 aaKnown RBP12.8□□□□□ -0.36
CCDC188-201ENST00000439765 SPINK13Q1W4C9 94 aa12.8□□□□□ -0.36
CCDC188-201ENST00000439765 GOLT1AQ6ZVE7 132 aa12.8□□□□□ -0.36
CCDC188-201ENST00000439765 CYB561D1Q8N8Q1 229 aa12.8□□□□□ -0.36
CCDC188-201ENST00000439765 Q8NAQ8 132 aa12.8□□□□□ -0.36
CCDC188-201ENST00000439765 C11orf52Q96A22 123 aa12.8□□□□□ -0.36
CCDC188-201ENST00000439765 C11orf68Q9H3H3 251 aaKnown RBP12.8□□□□□ -0.36
CCDC188-201ENST00000439765 IGKV2-40A0A087WW87 121 aaPredicted RBP12.79□□□□□ -0.36
CCDC188-201ENST00000439765 IGHV4-28A0A0C4DH34 117 aa12.79□□□□□ -0.36
CCDC188-201ENST00000439765 RBAKDNA6NC62 111 aa12.79□□□□□ -0.36
CCDC188-201ENST00000439765 C9JQL5 133 aa12.79□□□□□ -0.36
CCDC188-201ENST00000439765 TMEM250H0YL14 139 aa12.79□□□□□ -0.36
CCDC188-201ENST00000439765 IGKV2D-40P01614 121 aaPredicted RBP12.79□□□□□ -0.36
CCDC188-201ENST00000439765 EIF4E3Q8N5X7 224 aaKnown RBP12.79□□□□□ -0.36
CCDC188-201ENST00000439765 OR10J6PQ8NGY7 276 aa12.79□□□□□ -0.36
CCDC188-201ENST00000439765 K7EQM0 130 aa12.78□□□□□ -0.36
CCDC188-201ENST00000439765 C2CD4CQ8TF44 421 aa12.78□□□□□ -0.36
CCDC188-201ENST00000439765 LINC00479Q96M42 142 aa12.78□□□□□ -0.36
CCDC188-201ENST00000439765 VGLL1Q99990 258 aa12.78□□□□□ -0.36
CCDC188-201ENST00000439765 TREM1Q9NP99 234 aa12.78□□□□□ -0.36
CCDC188-201ENST00000439765 MIFP14174 115 aa12.78□□□□□ -0.36
CCDC188-201ENST00000439765 ERCC8Q13216 396 aa12.78□□□□□ -0.36
CCDC188-201ENST00000439765 UQCC3Q6UW78 93 aa12.78□□□□□ -0.36
CCDC188-201ENST00000439765 ZNF705AQ6ZN79 300 aaPredicted RBP12.78□□□□□ -0.36
CCDC188-201ENST00000439765 C9orf47Q6ZRZ4 202 aa12.78□□□□□ -0.36
CCDC188-201ENST00000439765 AGPAT4-IT1Q9H0P7 198 aa12.78□□□□□ -0.36
CCDC188-201ENST00000439765 PPP1R14DQ9NXH3 145 aa12.78□□□□□ -0.36
CCDC188-201ENST00000439765 KLF12Q9Y4X4 402 aa12.78□□□□□ -0.36
CCDC188-201ENST00000439765 CXorf65A6NEN9 183 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms