RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SMIM20Q8N5G0 67 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 IGKV1D-17A0A075B6S4 117 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 OXLD1Q5BKU9 147 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 OR11H12B2RN74 326 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 NPYP01303 97 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 IGKV3-20P01619 116 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 EVI2AP22794 236 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 CEND1Q8N111 149 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 OR11H1Q8NG94 326 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 OR11H2Q8NH07 326 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 LINC01548A6NM66 108 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 A8MWV9 139 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 TRACP01848 142 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 PRTN3P24158 256 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 CCL8P80075 99 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 SLC25A48Q6ZT89 311 aaKnown RBP5.95□□□□□ -1.46
CPSF6-202ENST00000435070 Q86TA4 180 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 MAPKAPK5-AS1Q8N8E1 139 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 FMC1Q96HJ9 113 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 NXT2Q9NPJ8 142 aaKnown RBP5.95□□□□□ -1.46
CPSF6-202ENST00000435070 GVINP1Q7Z2Y8 2422 aa5.95□□□□□ -1.46
CPSF6-202ENST00000435070 LYZL1Q6UWQ5 148 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 ORMDL3Q8N138 153 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 MRPL20Q9BYC9 149 aaKnown RBP5.94□□□□□ -1.46
CPSF6-202ENST00000435070 SLC25A15Q9Y619 301 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 GAGE12JA6NER3 117 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 WT1-ASQ06250 92 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 GAGE4Q13068 117 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 GAGE5Q13069 117 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 GAGE6Q13070 117 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 CT83Q5H943 113 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 CDIP1Q9H305 208 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 KLF12Q9Y4X4 402 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 CACNA1HO95180 2353 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 NCOR1O75376 2440 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 MYCNOSP40205 109 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 C17orf77Q96MU5 243 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 TRBV20-1A0A075B6N2 111 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 IGKV1D-37A0A075B6S9 117 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 NPFFO15130 113 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 IGHV3-23P01764 117 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 HTN3P15516 51 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 FOXI1Q12951 378 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 C1orf122Q6ZSJ8 110 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 ZNF492Q9P255 531 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 IQCF6A8MYZ5 107 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 GAS8-AS1O95177 125 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 SUMO2P61956 95 aaKnown RBP5.94□□□□□ -1.46
CPSF6-202ENST00000435070 FHL3Q13643 280 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 V9GYY9 64 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 CNOT1A5YKK6 2376 aaKnown RBP5.94□□□□□ -1.46
CPSF6-202ENST00000435070 TRAV40A0A0B4J280 105 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 NPIPB5A8MRT5 1133 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 LEPP41159 167 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 MRPL51Q4U2R6 128 aaKnown RBP5.94□□□□□ -1.46
CPSF6-202ENST00000435070 SPRNQ5BIV9 151 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 Q6ZUT4 128 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 GFRA4Q9GZZ7 299 aa5.94□□□□□ -1.46
CPSF6-202ENST00000435070 GPR179Q6PRD1 2367 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 U3KQE9 123 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 ZFHX4Q86UP3 3567 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 C5orf64Q2M2E5 130 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 NFE4Q86UQ8 179 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 GAGE2AQ6NT46 116 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 CACNG8Q8WXS5 425 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 RPUSD1Q9UJJ7 312 aaKnown RBP5.93□□□□□ -1.46
CPSF6-202ENST00000435070 MED13LQ71F56 2210 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 TMEM8BA6NDV4 472 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 LGALS1P09382 135 aaKnown RBP5.93□□□□□ -1.46
CPSF6-202ENST00000435070 TMEM78Q5T7P6 136 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 LINC00312Q9Y6C7 94 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 ASPMQ8IZT6 3477 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 PCNX1Q96RV3 2341 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 NDUFA3O95167 84 aa5.93□□□□□ -1.46
CPSF6-202ENST00000435070 DSCAMO60469 2012 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 GATA1P15976 413 aaPredicted RBP5.92□□□□□ -1.46
CPSF6-202ENST00000435070 DLX6P56179 175 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 SUMO4Q6EEV6 95 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 C8orf49Q96NF6 230 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 IGHV3-66A0A0C4DH42 116 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 IGKCP01834 107 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 KIR2DL4Q99706 377 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 C1QTNF4Q9BXJ3 329 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 FSTL3O95633 263 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 FAM104BQ5XKR9 115 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 MSRB1Q9NZV6 116 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 ZDBF2Q9HCK1 2354 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 WI2-2373I1.2A0A1W2PRP0 233 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 C17orf58Q2M2W7 97 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 PRO0461Q9UI25 63 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 HHLA3Q9XRX5 114 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 CEP192Q8TEP8 1941 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 CRIP1P50238 77 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 ODF1Q14990 250 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 ZNF56Q15929 161 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 FAM74A4Q5TZK3 123 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 ZFP2Q6ZN57 461 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 C3orf56Q8N813 242 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 ERG28Q9UKR5 140 aa5.92□□□□□ -1.46
CPSF6-202ENST00000435070 LINC01560Q8TB33 94 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms