RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 FGF7P21781 194 aa12.31□□□□□ -0.44
GPC1-203ENST00000425056 PDE6HQ13956 83 aa12.31□□□□□ -0.44
GPC1-203ENST00000425056 UPK3BQ9BT76 320 aa12.31□□□□□ -0.44
GPC1-203ENST00000425056 Q9H8V8 135 aa12.31□□□□□ -0.44
GPC1-203ENST00000425056 ALG5Q9Y673 324 aa12.31□□□□□ -0.44
GPC1-203ENST00000425056 A0A0J9YY99 117 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 C16orf90A8MZG2 172 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 KLLNB2CW77 178 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 SSNA1O43805 119 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 MPDU1O75352 247 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 NDUFB4O95168 129 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 HIST1H1EP10412 219 aaKnown RBP12.3□□□□□ -0.44
GPC1-203ENST00000425056 ATP6V1FQ16864 119 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 TTC32Q5I0X7 151 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 FAM19A4Q96LR4 140 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 KRTAP1-5Q9BYS1 174 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 Q9H3A6 140 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 TMPRSS5Q9H3S3 457 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 PRELID1Q9Y255 219 aa12.3□□□□□ -0.44
GPC1-203ENST00000425056 C7orf71A4D174 169 aa12.29□□□□□ -0.44
GPC1-203ENST00000425056 Q6ZTI0 123 aa12.29□□□□□ -0.44
GPC1-203ENST00000425056 C11orf72Q8NBR9 251 aa12.29□□□□□ -0.44
GPC1-203ENST00000425056 ZNF680Q8NEM1 530 aa12.29□□□□□ -0.44
GPC1-203ENST00000425056 C18orf15Q96N68 181 aa12.29□□□□□ -0.44
GPC1-203ENST00000425056 LINC00467Q9BRT7 94 aa12.29□□□□□ -0.44
GPC1-203ENST00000425056 NPCDR1Q9BY65 106 aa12.29□□□□□ -0.44
GPC1-203ENST00000425056 ABCA13Q86UQ4 5058 aa12.29□□□□□ -0.44
GPC1-203ENST00000425056 LRP1BQ9NZR2 4599 aa12.29□□□□□ -0.44
GPC1-203ENST00000425056 CDK2AP2O75956 126 aa12.28□□□□□ -0.44
GPC1-203ENST00000425056 PYYP10082 97 aa12.28□□□□□ -0.44
GPC1-203ENST00000425056 ERCC8Q13216 396 aa12.28□□□□□ -0.44
GPC1-203ENST00000425056 MRPS16Q9Y3D3 137 aaKnown RBP12.28□□□□□ -0.44
GPC1-203ENST00000425056 ZNF324O75467 553 aaPredicted RBP12.27□□□□□ -0.45
GPC1-203ENST00000425056 BTN1A1Q13410 526 aa12.27□□□□□ -0.45
GPC1-203ENST00000425056 ESRGQ1W209 222 aa12.27□□□□□ -0.45
GPC1-203ENST00000425056 GCSAMLQ5JQS6 135 aa12.27□□□□□ -0.45
GPC1-203ENST00000425056 Q6ZNX1 250 aa12.27□□□□□ -0.45
GPC1-203ENST00000425056 LINC00477Q96M19 166 aa12.27□□□□□ -0.45
GPC1-203ENST00000425056 KRTAP4-5Q9BYR2 181 aa12.27□□□□□ -0.45
GPC1-203ENST00000425056 MED28Q9H204 178 aa12.27□□□□□ -0.45
GPC1-203ENST00000425056 GSN-AS1Q9NRJ2 163 aa12.27□□□□□ -0.45
GPC1-203ENST00000425056 TIMM9Q9Y5J7 89 aa12.27□□□□□ -0.45
GPC1-203ENST00000425056 A0A1W2PPQ1 181 aa12.26□□□□□ -0.45
GPC1-203ENST00000425056 CRISP2P16562 243 aa12.26□□□□□ -0.45
GPC1-203ENST00000425056 CD300CQ08708 224 aa12.26□□□□□ -0.45
GPC1-203ENST00000425056 ANXA2RQ3ZCQ2 193 aa12.26□□□□□ -0.45
GPC1-203ENST00000425056 C9orf47Q6ZRZ4 202 aa12.26□□□□□ -0.45
GPC1-203ENST00000425056 EXOC3-AS1Q8N2X6 119 aa12.26□□□□□ -0.45
GPC1-203ENST00000425056 SLC25A2Q9BXI2 301 aa12.26□□□□□ -0.45
GPC1-203ENST00000425056 AGPAT4-IT1Q9H0P7 198 aa12.26□□□□□ -0.45
GPC1-203ENST00000425056 NMBP08949 121 aa12.25□□□□□ -0.45
GPC1-203ENST00000425056 EIF4E3Q8N5X7 224 aaKnown RBP12.25□□□□□ -0.45
GPC1-203ENST00000425056 BLNKQ8WV28 456 aa12.25□□□□□ -0.45
GPC1-203ENST00000425056 VSIG2Q96IQ7 327 aa12.25□□□□□ -0.45
GPC1-203ENST00000425056 FAM167A-AS1Q96KT0 104 aa12.25□□□□□ -0.45
GPC1-203ENST00000425056 AAMDCQ9H7C9 122 aa12.25□□□□□ -0.45
GPC1-203ENST00000425056 TRGV2A0A075B6R0 118 aa12.24□□□□□ -0.45
GPC1-203ENST00000425056 A0A096LPF7 62 aa12.24□□□□□ -0.45
GPC1-203ENST00000425056 BTF3P20290 206 aaKnown RBP12.24□□□□□ -0.45
GPC1-203ENST00000425056 TCL1AP56279 114 aa12.24□□□□□ -0.45
GPC1-203ENST00000425056 CYCSP99999 105 aaKnown RBP12.24□□□□□ -0.45
GPC1-203ENST00000425056 ICAM4Q14773 271 aa12.24□□□□□ -0.45
GPC1-203ENST00000425056 IBA57Q5T440 356 aaKnown RBP12.24□□□□□ -0.45
GPC1-203ENST00000425056 ZFAND2AQ8N6M9 145 aa12.24□□□□□ -0.45
GPC1-203ENST00000425056 OR5C1Q8NGR4 320 aa12.24□□□□□ -0.45
GPC1-203ENST00000425056 THAP6Q8TBB0 222 aa12.24□□□□□ -0.45
GPC1-203ENST00000425056 FUT9Q9Y231 359 aa12.24□□□□□ -0.45
GPC1-203ENST00000425056 IGKV2-40A0A087WW87 121 aaPredicted RBP12.23□□□□□ -0.45
GPC1-203ENST00000425056 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
GPC1-203ENST00000425056 IGKV2D-40P01614 121 aaPredicted RBP12.23□□□□□ -0.45
GPC1-203ENST00000425056 RNASE4P34096 147 aaKnown RBP12.23□□□□□ -0.45
GPC1-203ENST00000425056 NHLH2Q02577 135 aa12.23□□□□□ -0.45
GPC1-203ENST00000425056 SPINK4O60575 86 aa12.22□□□□□ -0.45
GPC1-203ENST00000425056 GPX1P07203 203 aa12.22□□□□□ -0.45
GPC1-203ENST00000425056 TMEM78Q5T7P6 136 aa12.22□□□□□ -0.45
GPC1-203ENST00000425056 PRR9Q5T870 116 aa12.22□□□□□ -0.45
GPC1-203ENST00000425056 FAM122CQ6P4D5 195 aa12.22□□□□□ -0.45
GPC1-203ENST00000425056 MIR17HGQ75NE6 70 aa12.22□□□□□ -0.45
GPC1-203ENST00000425056 ASB13Q8WXK3 278 aa12.22□□□□□ -0.45
GPC1-203ENST00000425056 SLC25A31Q9H0C2 315 aa12.22□□□□□ -0.45
GPC1-203ENST00000425056 KCNIP2Q9NS61 270 aa12.22□□□□□ -0.45
GPC1-203ENST00000425056 KLF12Q9Y4X4 402 aa12.22□□□□□ -0.45
GPC1-203ENST00000425056 E5RGE8 158 aa12.21□□□□□ -0.45
GPC1-203ENST00000425056 NBEAP1P0C6P0 100 aa12.21□□□□□ -0.45
GPC1-203ENST00000425056 SPATA12Q7Z6I5 190 aa12.21□□□□□ -0.45
GPC1-203ENST00000425056 VGLL1Q99990 258 aa12.21□□□□□ -0.45
GPC1-203ENST00000425056 MRPL32Q9BYC8 188 aaKnown RBP12.21□□□□□ -0.45
GPC1-203ENST00000425056 NMES1Q9C002 83 aa12.21□□□□□ -0.45
GPC1-203ENST00000425056 OR5AC2Q9NZP5 309 aa12.21□□□□□ -0.45
GPC1-203ENST00000425056 ZNF492Q9P255 531 aa12.21□□□□□ -0.45
GPC1-203ENST00000425056 TRBV7-9A0A0J9YWB2 115 aa12.2□□□□□ -0.46
GPC1-203ENST00000425056 RGS13O14921 159 aa12.2□□□□□ -0.46
GPC1-203ENST00000425056 SIX6O95475 246 aa12.2□□□□□ -0.46
GPC1-203ENST00000425056 H2BFSP57053 126 aa12.2□□□□□ -0.46
GPC1-203ENST00000425056 FXYD5Q96DB9 178 aa12.2□□□□□ -0.46
GPC1-203ENST00000425056 ST6GAL2Q96JF0 529 aa12.2□□□□□ -0.46
GPC1-203ENST00000425056 WDR61Q9GZS3 305 aaKnown RBP12.2□□□□□ -0.46
GPC1-203ENST00000425056 OR51M1Q9H341 326 aa12.2□□□□□ -0.46
GPC1-203ENST00000425056 TP53TG3Q9ULZ0 132 aa12.2□□□□□ -0.46
GPC1-203ENST00000425056 APOBP04114 4563 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms