RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 HERV-K104P63124 156 aa8.89□□□□□ -0.99
SEC61A1-202ENST00000424880 TRAV26-2A0A0B4J265 109 aa8.89□□□□□ -0.99
SEC61A1-202ENST00000424880 ATP5IP56385 69 aaPredicted RBP8.89□□□□□ -0.99
SEC61A1-202ENST00000424880 ASCL5Q7RTU5 278 aa8.89□□□□□ -0.99
SEC61A1-202ENST00000424880 ANAPC13Q9BS18 74 aa8.89□□□□□ -0.99
SEC61A1-202ENST00000424880 RALYQ9UKM9 306 aaKnown RBP8.89□□□□□ -0.99
SEC61A1-202ENST00000424880 IGKV2-40A0A087WW87 121 aaPredicted RBP8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 IGKV2D-40P01614 121 aaPredicted RBP8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 TMEM158Q8WZ71 300 aa8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 C1QTNF4Q9BXJ3 329 aa8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 SLC25A39Q9BZJ4 359 aaPredicted RBP8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 ZFHX2Q9C0A1 2572 aaPredicted RBP8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 EFNA4P52798 201 aa8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 C3orf56Q8N813 242 aa8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 HIGD1AQ9Y241 93 aa8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 SHISA9B4DS77 424 aa8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 SPRY2O43597 315 aa8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 THBDP07204 575 aa8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 PAX8Q06710 450 aa8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 OR10X1Q8NGY0 326 aa8.88□□□□□ -0.99
SEC61A1-202ENST00000424880 TRGV5A0A0B4J1U4 118 aa8.87□□□□□ -0.99
SEC61A1-202ENST00000424880 IGHV3-35A0A0C4DH35 117 aa8.87□□□□□ -0.99
SEC61A1-202ENST00000424880 BRI3O95415 125 aa8.87□□□□□ -0.99
SEC61A1-202ENST00000424880 HLA-DRB4P13762 266 aa8.87□□□□□ -0.99
SEC61A1-202ENST00000424880 CCL8P80075 99 aa8.87□□□□□ -0.99
SEC61A1-202ENST00000424880 TNFRSF18Q9Y5U5 241 aa8.87□□□□□ -0.99
SEC61A1-202ENST00000424880 HLA-DRB4X5D2U9 266 aa8.87□□□□□ -0.99
SEC61A1-202ENST00000424880 RIF1Q5UIP0 2472 aaKnown RBP8.87□□□□□ -0.99
SEC61A1-202ENST00000424880 MALRD1Q5VYJ5 2156 aa8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 IGHV1-18A0A0C4DH31 117 aa8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 SUB1P53999 127 aaKnown RBP eCLIP8.86□□□□□ -0.991e-8■■□□□ 14.2
SEC61A1-202ENST00000424880 SH2D1AO60880 128 aa8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 EGR2P11161 476 aaPredicted RBP8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 RRN3P1Q2M238 152 aa8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 KLF17Q5JT82 389 aaPredicted RBP8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 SMIM20Q8N5G0 67 aa8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 RAX2Q96IS3 184 aa8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 RAI1Q7Z5J4 1906 aaPredicted RBP8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 LINC01549A6NIU2 74 aa8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 M0R1B8 84 aa8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 IGKV3-15P01624 115 aa8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 HLA-DMBP28068 263 aa8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 ZNF80P51504 273 aaPredicted RBP8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 ZMAT4Q9H898 229 aa8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 OTORQ9NRC9 128 aa8.86□□□□□ -0.99
SEC61A1-202ENST00000424880 ZNF292O60281 2723 aa8.85□□□□□ -0.99
SEC61A1-202ENST00000424880 ORM1P02763 201 aa8.85□□□□□ -0.99
SEC61A1-202ENST00000424880 TAL2Q16559 108 aa8.85□□□□□ -0.99
SEC61A1-202ENST00000424880 THAP8Q8NA92 274 aa8.85□□□□□ -0.99
SEC61A1-202ENST00000424880 PIEZO2Q9H5I5 2752 aa8.85□□□□□ -0.99
SEC61A1-202ENST00000424880 A0A1B0GW15 77 aa8.85□□□□□ -0.99
SEC61A1-202ENST00000424880 PRTN3P24158 256 aa8.85□□□□□ -0.99
SEC61A1-202ENST00000424880 RPL32P62910 135 aaKnown RBP8.85□□□□□ -0.99
SEC61A1-202ENST00000424880 Q6AWC8 147 aa8.85□□□□□ -0.99
SEC61A1-202ENST00000424880 MORN3Q6PF18 240 aaPredicted RBP8.85□□□□□ -0.99
SEC61A1-202ENST00000424880 PTPRZ1P23471 2315 aaPredicted RBP8.85□□□□□ -0.99
SEC61A1-202ENST00000424880 OR4C13Q8NGP0 309 aa8.84□□□□□ -0.99
SEC61A1-202ENST00000424880 U3KQK5 164 aa8.84□□□□□ -0.99
SEC61A1-202ENST00000424880 DPM2O94777 84 aa8.84□□□□□ -0.99
SEC61A1-202ENST00000424880 CARD19Q96LW7 228 aa8.84□□□□□ -0.99
SEC61A1-202ENST00000424880 VCX2Q9H322 139 aa8.84□□□□□ -0.99
SEC61A1-202ENST00000424880 IGHV3-23P01764 117 aa8.84□□□□□ -0.99
SEC61A1-202ENST00000424880 NHLRC4P0CG21 123 aaPredicted RBP8.84□□□□□ -0.99
SEC61A1-202ENST00000424880 EMP1P54849 157 aa8.84□□□□□ -0.99
SEC61A1-202ENST00000424880 CFAP126Q5VTH2 177 aa8.84□□□□□ -0.99
SEC61A1-202ENST00000424880 Q6ZT83 130 aa8.84□□□□□ -0.99
SEC61A1-202ENST00000424880 GAFA1Q96PS6 74 aa8.84□□□□□ -0.99
SEC61A1-202ENST00000424880 TRBV19A0A075B6N1 114 aa8.83□□□□□ -1
SEC61A1-202ENST00000424880 TNFRSF6BO95407 300 aa8.83□□□□□ -1
SEC61A1-202ENST00000424880 HOXA3O43365 443 aaPredicted RBP8.83□□□□□ -1
SEC61A1-202ENST00000424880 IGLV2-23P01705 113 aa8.83□□□□□ -1
SEC61A1-202ENST00000424880 IL4P05112 153 aa8.83□□□□□ -1
SEC61A1-202ENST00000424880 SIGLEC15Q6ZMC9 328 aa8.83□□□□□ -1
SEC61A1-202ENST00000424880 Q6ZQT7 251 aa8.83□□□□□ -1
SEC61A1-202ENST00000424880 ZNF493Q6ZR52 646 aa8.83□□□□□ -1
SEC61A1-202ENST00000424880 PIP4P1Q86T03 277 aa8.83□□□□□ -1
SEC61A1-202ENST00000424880 RASL11BQ9BPW5 248 aa8.83□□□□□ -1
SEC61A1-202ENST00000424880 MAP1LC3AQ9H492 121 aa8.83□□□□□ -1
SEC61A1-202ENST00000424880 NGBQ9NPG2 151 aa8.83□□□□□ -1
SEC61A1-202ENST00000424880 ZNF71Q9NQZ8 489 aaPredicted RBP8.83□□□□□ -1
SEC61A1-202ENST00000424880 PROCRQ9UNN8 238 aa8.83□□□□□ -1
SEC61A1-202ENST00000424880 IGHG4P01861 327 aa8.82□□□□□ -1
SEC61A1-202ENST00000424880 KLHL30-AS1Q8NEE0 82 aa8.82□□□□□ -1
SEC61A1-202ENST00000424880 DEFB124Q8NES8 71 aa8.82□□□□□ -1
SEC61A1-202ENST00000424880 RPEQ96AT9 228 aa8.82□□□□□ -1
SEC61A1-202ENST00000424880 ARHGAP32A7KAX9 2087 aa8.82□□□□□ -1
SEC61A1-202ENST00000424880 C9orf106Q8NAJ2 232 aa8.82□□□□□ -1
SEC61A1-202ENST00000424880 AJUBAQ96IF1 538 aa8.82□□□□□ -1
SEC61A1-202ENST00000424880 CITED1Q99966 193 aa8.82□□□□□ -1
SEC61A1-202ENST00000424880 CELSR1Q9NYQ6 3014 aa8.82□□□□□ -1
SEC61A1-202ENST00000424880 CCDC179H3BU77 68 aa8.82□□□□□ -1
SEC61A1-202ENST00000424880 TMEM167AQ8TBQ9 72 aa8.82□□□□□ -1
SEC61A1-202ENST00000424880 COL12A1Q99715 3063 aa8.81□□□□□ -1
SEC61A1-202ENST00000424880 PIEZO1Q92508 2521 aa8.81□□□□□ -1
SEC61A1-202ENST00000424880 H7C2G1 150 aa8.81□□□□□ -1
SEC61A1-202ENST00000424880 FCN3O75636 299 aa8.81□□□□□ -1
SEC61A1-202ENST00000424880 TRGV3P03979 118 aa8.81□□□□□ -1
SEC61A1-202ENST00000424880 SRD5A1P18405 259 aa8.81□□□□□ -1
SEC61A1-202ENST00000424880 ZFAND6Q6FIF0 208 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms