RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 IGLL5B9A064 214 aa13.03□□□□□ -0.32
PKP4-204ENST00000421462 TMEM178BH3BS89 294 aa13.03□□□□□ -0.32
PKP4-204ENST00000421462 J3QR89 54 aa13.03□□□□□ -0.32
PKP4-204ENST00000421462 TNFRSF6BO95407 300 aa13.03□□□□□ -0.32
PKP4-204ENST00000421462 FAM215AQ9Y5M1 114 aa13.03□□□□□ -0.32
PKP4-204ENST00000421462 A0A1B0GV72 72 aa13.02□□□□□ -0.32
PKP4-204ENST00000421462 ADIPOQQ15848 244 aa13.02□□□□□ -0.32
PKP4-204ENST00000421462 ASH1LQ9NR48 2969 aaKnown RBP13.02□□□□□ -0.32
PKP4-204ENST00000421462 U3KQK5 164 aa13.02□□□□□ -0.32
PKP4-204ENST00000421462 RELNP78509 3460 aa13.02□□□□□ -0.32
PKP4-204ENST00000421462 IGHV3OR16-13A0A075B7E8 117 aa13.02□□□□□ -0.33
PKP4-204ENST00000421462 IGHV3-74A0A0B4J1X5 117 aa13.02□□□□□ -0.33
PKP4-204ENST00000421462 A0A1B0GWB2 263 aa13.02□□□□□ -0.33
PKP4-204ENST00000421462 K7EIM0 57 aa13.02□□□□□ -0.33
PKP4-204ENST00000421462 ERCC8Q13216 396 aa13.02□□□□□ -0.33
PKP4-204ENST00000421462 COLQQ9Y215 455 aaPredicted RBP13.02□□□□□ -0.33
PKP4-204ENST00000421462 UFC1Q9Y3C8 167 aa13.02□□□□□ -0.33
PKP4-204ENST00000421462 CKS1BP61024 79 aa13.02□□□□□ -0.33
PKP4-204ENST00000421462 PAX8Q06710 450 aa13.02□□□□□ -0.33
PKP4-204ENST00000421462 HES1Q14469 280 aa13.02□□□□□ -0.33
PKP4-204ENST00000421462 PRR25Q96S07 402 aa13.02□□□□□ -0.33
PKP4-204ENST00000421462 ATP6V0BQ99437 205 aa13.02□□□□□ -0.33
PKP4-204ENST00000421462 DYNLRB1Q9NP97 96 aa13.02□□□□□ -0.33
PKP4-204ENST00000421462 DPM2O94777 84 aa13.01□□□□□ -0.33
PKP4-204ENST00000421462 CEACAM3P40198 252 aa13.01□□□□□ -0.33
PKP4-204ENST00000421462 SPTA1P02549 2419 aa13.01□□□□□ -0.33
PKP4-204ENST00000421462 CDX4O14627 284 aaPredicted RBP13.01□□□□□ -0.33
PKP4-204ENST00000421462 PRRG2O14669 202 aa13.01□□□□□ -0.33
PKP4-204ENST00000421462 EFNA4P52798 201 aa13.01□□□□□ -0.33
PKP4-204ENST00000421462 FOXI2Q6ZQN5 318 aa13.01□□□□□ -0.33
PKP4-204ENST00000421462 PHLDA1Q8WV24 401 aaPredicted RBP13.01□□□□□ -0.33
PKP4-204ENST00000421462 IGHV3-66A0A0C4DH42 116 aa13□□□□□ -0.33
PKP4-204ENST00000421462 MBD3L4A6NDZ8 208 aaPredicted RBP13□□□□□ -0.33
PKP4-204ENST00000421462 MBD3L3A6NE82 208 aaPredicted RBP13□□□□□ -0.33
PKP4-204ENST00000421462 MBD3L5A6NJ08 208 aaPredicted RBP13□□□□□ -0.33
PKP4-204ENST00000421462 BSPH1Q075Z2 132 aa13□□□□□ -0.33
PKP4-204ENST00000421462 MBD3L2Q8NHZ7 208 aaPredicted RBP13□□□□□ -0.33
PKP4-204ENST00000421462 DEFB104AQ8WTQ1 72 aa13□□□□□ -0.33
PKP4-204ENST00000421462 RIF1Q5UIP0 2472 aaKnown RBP13□□□□□ -0.33
PKP4-204ENST00000421462 C12orf74Q32Q52 190 aa13□□□□□ -0.33
PKP4-204ENST00000421462 GAGE13Q4V321 117 aa13□□□□□ -0.33
PKP4-204ENST00000421462 GATD1Q8NB37 220 aa13□□□□□ -0.33
PKP4-204ENST00000421462 DCHS2Q6V1P9 2916 aa13□□□□□ -0.33
PKP4-204ENST00000421462 AKAP6Q13023 2319 aa12.99□□□□□ -0.33
PKP4-204ENST00000421462 C20orf78Q9BR46 151 aa12.99□□□□□ -0.33
PKP4-204ENST00000421462 SPRY2O43597 315 aa12.99□□□□□ -0.33
PKP4-204ENST00000421462 TMEM155Q4W5P6 130 aa12.99□□□□□ -0.33
PKP4-204ENST00000421462 RNF185Q96GF1 192 aa12.99□□□□□ -0.33
PKP4-204ENST00000421462 CYSLTR1Q9Y271 337 aa12.99□□□□□ -0.33
PKP4-204ENST00000421462 K7EM74 188 aa12.99□□□□□ -0.33
PKP4-204ENST00000421462 GFRALQ6UXV0 394 aa12.98□□□□□ -0.33
PKP4-204ENST00000421462 LINC00311Q8N616 119 aa12.98□□□□□ -0.33
PKP4-204ENST00000421462 J3KRW8 73 aa12.98□□□□□ -0.33
PKP4-204ENST00000421462 TGFAP01135 160 aa12.98□□□□□ -0.33
PKP4-204ENST00000421462 E9PLD3 99 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 TRGV3P03979 118 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 SCGB2A2Q13296 93 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 TTC9CQ8N5M4 171 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 RNF182Q8N6D2 247 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 CUL9Q8IWT3 2517 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 ANKRD11Q6UB99 2663 aaPredicted RBP12.97□□□□□ -0.33
PKP4-204ENST00000421462 TRAV26-1A0A087WT03 109 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 F8W1H4 67 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 TIMM23O14925 209 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 CRYGBP07316 175 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 MYOZ3Q8TDC0 251 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 IGHV3-49A0A0A0MS15 119 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 DTX2Q86UW9 622 aa12.97□□□□□ -0.33
PKP4-204ENST00000421462 ZNF418Q8TF45 676 aaPredicted RBP12.97□□□□□ -0.33
PKP4-204ENST00000421462 LOC107984156A0A0G2JMH3 177 aa12.96□□□□□ -0.33
PKP4-204ENST00000421462 BUB1B-PAK6H3BSN5 160 aa12.96□□□□□ -0.33
PKP4-204ENST00000421462 MRPS12O15235 138 aaKnown RBP12.96□□□□□ -0.33
PKP4-204ENST00000421462 DLX6P56179 175 aa12.96□□□□□ -0.33
PKP4-204ENST00000421462 ARL17AQ8IVW1 177 aa12.96□□□□□ -0.33
PKP4-204ENST00000421462 LYPD1Q8N2G4 141 aa12.96□□□□□ -0.33
PKP4-204ENST00000421462 ONECUT1Q9UBC0 465 aa12.96□□□□□ -0.33
PKP4-204ENST00000421462 TRBV6-1A0A0K0K1D8 114 aa12.96□□□□□ -0.34
PKP4-204ENST00000421462 NDUFS8O00217 210 aa12.96□□□□□ -0.34
PKP4-204ENST00000421462 HIGD1BQ9P298 99 aa12.96□□□□□ -0.34
PKP4-204ENST00000421462 PRAC2D3DTV9 90 aa12.95□□□□□ -0.34
PKP4-204ENST00000421462 APOMO95445 188 aa12.95□□□□□ -0.34
PKP4-204ENST00000421462 BMI1P35226 326 aa12.95□□□□□ -0.34
PKP4-204ENST00000421462 TTC28Q96AY4 2481 aa12.95□□□□□ -0.34
PKP4-204ENST00000421462 PVRIGQ6DKI7 326 aa12.95□□□□□ -0.34
PKP4-204ENST00000421462 Q6ZQT7 251 aa12.94□□□□□ -0.34
PKP4-204ENST00000421462 TM2D2Q9BX73 214 aa12.94□□□□□ -0.34
PKP4-204ENST00000421462 NXT2Q9NPJ8 142 aaKnown RBP12.94□□□□□ -0.34
PKP4-204ENST00000421462 ZNF883P0CG24 379 aa12.94□□□□□ -0.34
PKP4-204ENST00000421462 PTH2Q96A98 100 aa12.94□□□□□ -0.34
PKP4-204ENST00000421462 NCBP2LA6PVI3 153 aaKnown RBP12.94□□□□□ -0.34
PKP4-204ENST00000421462 SYT8Q8NBV8 401 aa12.94□□□□□ -0.34
PKP4-204ENST00000421462 IL17RELQ6ZVW7 336 aa12.93□□□□□ -0.34
PKP4-204ENST00000421462 DYNAPQ8N1N2 210 aa12.93□□□□□ -0.34
PKP4-204ENST00000421462 GLMPQ8WWB7 406 aa12.93□□□□□ -0.34
PKP4-204ENST00000421462 IGLC6P0CF74 106 aa12.93□□□□□ -0.34
PKP4-204ENST00000421462 MRPL16Q9NX20 251 aaKnown RBP12.93□□□□□ -0.34
PKP4-204ENST00000421462 PGPEP1Q9NXJ5 209 aa12.93□□□□□ -0.34
PKP4-204ENST00000421462 CFHR4Q92496 578 aa12.92□□□□□ -0.34
PKP4-204ENST00000421462 FABP5P3A8MUU1 101 aa12.92□□□□□ -0.34
PKP4-204ENST00000421462 IGLV1-47P01700 117 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms