RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 UFC1Q9Y3C8 167 aa13.73□□□□□ -0.21
PMS1-206ENST00000418224 LOC107984156A0A0G2JMH3 177 aa13.73□□□□□ -0.21
PMS1-206ENST00000418224 SMCPP49901 116 aaPredicted RBP13.73□□□□□ -0.21
PMS1-206ENST00000418224 SHISA2Q6UWI4 295 aa13.73□□□□□ -0.21
PMS1-206ENST00000418224 ARL17AQ8IVW1 177 aa13.73□□□□□ -0.21
PMS1-206ENST00000418224 MAP1LC3AQ9H492 121 aa13.73□□□□□ -0.21
PMS1-206ENST00000418224 MSRB1Q9NZV6 116 aa13.73□□□□□ -0.21
PMS1-206ENST00000418224 CNTFRP26992 372 aa13.72□□□□□ -0.21
PMS1-206ENST00000418224 PSMB2P49721 201 aa13.72□□□□□ -0.21
PMS1-206ENST00000418224 TMEM133Q9H2Q1 129 aa13.72□□□□□ -0.21
PMS1-206ENST00000418224 ZMAT4Q9H898 229 aa13.72□□□□□ -0.21
PMS1-206ENST00000418224 PGPEP1Q9NXJ5 209 aa13.72□□□□□ -0.21
PMS1-206ENST00000418224 MRPL35Q9NZE8 188 aaKnown RBP13.72□□□□□ -0.21
PMS1-206ENST00000418224 LINC01548A6NM66 108 aa13.72□□□□□ -0.21
PMS1-206ENST00000418224 RBP4P02753 201 aa13.72□□□□□ -0.21
PMS1-206ENST00000418224 GATA1P15976 413 aaPredicted RBP13.72□□□□□ -0.21
PMS1-206ENST00000418224 RPL27AP46776 148 aaKnown RBP13.72□□□□□ -0.21
PMS1-206ENST00000418224 DEFB124Q8NES8 71 aa13.72□□□□□ -0.21
PMS1-206ENST00000418224 PIFOQ8TCI5 191 aa13.72□□□□□ -0.21
PMS1-206ENST00000418224 TMEM158Q8WZ71 300 aa13.72□□□□□ -0.21
PMS1-206ENST00000418224 FAM90A27PA6NNH2 459 aa13.72□□□□□ -0.21
PMS1-206ENST00000418224 NDUFA3O95167 84 aa13.72□□□□□ -0.21
PMS1-206ENST00000418224 LAMA5O15230 3695 aa13.71□□□□□ -0.21
PMS1-206ENST00000418224 C17orf100A8MU93 164 aa13.71□□□□□ -0.21
PMS1-206ENST00000418224 SH2D1AO60880 128 aa13.7□□□□□ -0.22
PMS1-206ENST00000418224 SRSF1Q07955 248 aaKnown RBP eCLIP13.7□□□□□ -0.22
PMS1-206ENST00000418224 GAGE5Q13069 117 aa13.7□□□□□ -0.22
PMS1-206ENST00000418224 GAGE6Q13070 117 aa13.7□□□□□ -0.22
PMS1-206ENST00000418224 DMXL2Q8TDJ6 3036 aa13.7□□□□□ -0.22
PMS1-206ENST00000418224 TMEM75Q8N9X5 138 aa13.7□□□□□ -0.22
PMS1-206ENST00000418224 POLEQ07864 2286 aa13.7□□□□□ -0.22
PMS1-206ENST00000418224 HOXA3O43365 443 aaPredicted RBP13.69□□□□□ -0.22
PMS1-206ENST00000418224 HOXB4P17483 251 aaPredicted RBP13.69□□□□□ -0.22
PMS1-206ENST00000418224 ADIPOQQ15848 244 aa13.69□□□□□ -0.22
PMS1-206ENST00000418224 CFAP126Q5VTH2 177 aa13.69□□□□□ -0.22
PMS1-206ENST00000418224 TRBV19A0A075B6N1 114 aa13.69□□□□□ -0.22
PMS1-206ENST00000418224 TGFAP01135 160 aa13.69□□□□□ -0.22
PMS1-206ENST00000418224 IL4P05112 153 aa13.69□□□□□ -0.22
PMS1-206ENST00000418224 CRYGCP07315 174 aa13.69□□□□□ -0.22
PMS1-206ENST00000418224 C3orf36Q3SXR2 165 aa13.68□□□□□ -0.22
PMS1-206ENST00000418224 MORN3Q6PF18 240 aaPredicted RBP13.68□□□□□ -0.22
PMS1-206ENST00000418224 ZFP2Q6ZN57 461 aa13.68□□□□□ -0.22
PMS1-206ENST00000418224 RPEQ96AT9 228 aa13.68□□□□□ -0.22
PMS1-206ENST00000418224 NGBQ9NPG2 151 aa13.68□□□□□ -0.22
PMS1-206ENST00000418224 ADGRG4Q8IZF6 3080 aa13.68□□□□□ -0.22
PMS1-206ENST00000418224 TMEM178BH3BS89 294 aa13.68□□□□□ -0.22
PMS1-206ENST00000418224 MRGPRG-AS1Q2M3A8 158 aa13.68□□□□□ -0.22
PMS1-206ENST00000418224 CTSZQ9UBR2 303 aa13.68□□□□□ -0.22
PMS1-206ENST00000418224 SHISA9B4DS77 424 aa13.67□□□□□ -0.22
PMS1-206ENST00000418224 DLX4Q92988 240 aaPredicted RBP13.67□□□□□ -0.22
PMS1-206ENST00000418224 HERV-K104P63124 156 aa13.67□□□□□ -0.22
PMS1-206ENST00000418224 PSMG4Q5JS54 123 aa13.67□□□□□ -0.22
PMS1-206ENST00000418224 SIGLEC15Q6ZMC9 328 aa13.67□□□□□ -0.22
PMS1-206ENST00000418224 KALRNO60229 2985 aa13.67□□□□□ -0.22
PMS1-206ENST00000418224 NCBP2LA6PVI3 153 aaKnown RBP13.66□□□□□ -0.22
PMS1-206ENST00000418224 CNIH1O95406 144 aa13.66□□□□□ -0.22
PMS1-206ENST00000418224 TNFRSF6BO95407 300 aa13.66□□□□□ -0.22
PMS1-206ENST00000418224 LOXP28300 417 aaPredicted RBP13.66□□□□□ -0.22
PMS1-206ENST00000418224 TAL2Q16559 108 aa13.66□□□□□ -0.22
PMS1-206ENST00000418224 CARD19Q96LW7 228 aa13.66□□□□□ -0.22
PMS1-206ENST00000418224 MALRD1Q5VYJ5 2156 aa13.66□□□□□ -0.22
PMS1-206ENST00000418224 LINC01549A6NIU2 74 aa13.66□□□□□ -0.22
PMS1-206ENST00000418224 VSTM5A8MXK1 200 aa13.66□□□□□ -0.22
PMS1-206ENST00000418224 H3BVH4 76 aa13.66□□□□□ -0.22
PMS1-206ENST00000418224 BSPH1Q075Z2 132 aa13.66□□□□□ -0.22
PMS1-206ENST00000418224 ZFAND6Q6FIF0 208 aa13.66□□□□□ -0.22
PMS1-206ENST00000418224 TEX29Q8N6K0 151 aa13.66□□□□□ -0.22
PMS1-206ENST00000418224 KIR2DL4Q99706 377 aa13.66□□□□□ -0.22
PMS1-206ENST00000418224 ATP5LO75964 103 aa13.65□□□□□ -0.22
PMS1-206ENST00000418224 IGHV1-8P0DP01 117 aa13.65□□□□□ -0.22
PMS1-206ENST00000418224 EGR2P11161 476 aaPredicted RBP13.65□□□□□ -0.22
PMS1-206ENST00000418224 PLGLAQ15195 96 aa13.65□□□□□ -0.22
PMS1-206ENST00000418224 LINC00311Q8N616 119 aa13.65□□□□□ -0.22
PMS1-206ENST00000418224 NUP37Q8NFH4 326 aa13.65□□□□□ -0.22
PMS1-206ENST00000418224 RASL11BQ9BPW5 248 aa13.65□□□□□ -0.22
PMS1-206ENST00000418224 ZGRF1Q86YA3 2104 aa13.65□□□□□ -0.22
PMS1-206ENST00000418224 TRBV7-3A0A075B6L6 115 aa13.65□□□□□ -0.22
PMS1-206ENST00000418224 SCNM1Q9BWG6 230 aa13.65□□□□□ -0.22
PMS1-206ENST00000418224 FBXL15Q9H469 300 aa13.65□□□□□ -0.22
PMS1-206ENST00000418224 TMEM14CQ9P0S9 112 aa13.65□□□□□ -0.22
PMS1-206ENST00000418224 IGKV2-40A0A087WW87 121 aaPredicted RBP13.64□□□□□ -0.23
PMS1-206ENST00000418224 IGKV2D-40P01614 121 aaPredicted RBP13.64□□□□□ -0.23
PMS1-206ENST00000418224 Q8TAT8 98 aa13.64□□□□□ -0.23
PMS1-206ENST00000418224 SIGLEC9Q9Y336 463 aa13.64□□□□□ -0.23
PMS1-206ENST00000418224 TRBV6-1A0A0K0K1D8 114 aa13.64□□□□□ -0.23
PMS1-206ENST00000418224 A6NJY4 79 aa13.64□□□□□ -0.23
PMS1-206ENST00000418224 MYOZ3Q8TDC0 251 aa13.64□□□□□ -0.23
PMS1-206ENST00000418224 DYNLRB1Q9NP97 96 aa13.64□□□□□ -0.23
PMS1-206ENST00000418224 ORM1P02763 201 aa13.64□□□□□ -0.23
PMS1-206ENST00000418224 SMIM20Q8N5G0 67 aa13.64□□□□□ -0.23
PMS1-206ENST00000418224 ATP6V0E2Q8NHE4 81 aa13.64□□□□□ -0.23
PMS1-206ENST00000418224 RNF185Q96GF1 192 aa13.64□□□□□ -0.23
PMS1-206ENST00000418224 TRBV20-1A0A075B6N2 111 aa13.63□□□□□ -0.23
PMS1-206ENST00000418224 PPDPFLQ8WWR9 84 aa13.63□□□□□ -0.23
PMS1-206ENST00000418224 COX7A1P24310 79 aa13.63□□□□□ -0.23
PMS1-206ENST00000418224 EFNA4P52798 201 aa13.63□□□□□ -0.23
PMS1-206ENST00000418224 TMEM155Q4W5P6 130 aa13.63□□□□□ -0.23
PMS1-206ENST00000418224 PPP1R27Q86WC6 154 aa13.63□□□□□ -0.23
PMS1-206ENST00000418224 PRSS33Q8NF86 280 aa13.63□□□□□ -0.23
PMS1-206ENST00000418224 NXT2Q9NPJ8 142 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms