RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TRGV1A0A0A0MS02 117 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 UBE2L5PA0A1B0GUS4 154 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 IGSF23A1L1A6 192 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 LYRM1O43325 122 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 HIST1H1EP10412 219 aaKnown RBP10.18□□□□□ -0.78
RPS28-201ENST00000417088 S100A11P31949 105 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 SULT1A1P50225 295 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 BAXQ07812 192 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 BTN1A1Q13410 526 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 ANXA2RQ3ZCQ2 193 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 LINC00477Q96M19 166 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 AGPAT4-IT1Q9H0P7 198 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 LYRM2Q9NU23 88 aaPredicted RBP10.18□□□□□ -0.78
RPS28-201ENST00000417088 FUT9Q9Y231 359 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 PRELID1Q9Y255 219 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 KLF12Q9Y4X4 402 aa10.18□□□□□ -0.78
RPS28-201ENST00000417088 TRAV6A0A075B6T7 132 aa10.17□□□□□ -0.78
RPS28-201ENST00000417088 PYYP10082 97 aa10.17□□□□□ -0.78
RPS28-201ENST00000417088 PVALBP20472 110 aaPredicted RBP10.17□□□□□ -0.78
RPS28-201ENST00000417088 RNASE4P34096 147 aaKnown RBP10.17□□□□□ -0.78
RPS28-201ENST00000417088 LINC00315P59091 139 aa10.17□□□□□ -0.78
RPS28-201ENST00000417088 IL15RAQ13261 267 aa10.17□□□□□ -0.78
RPS28-201ENST00000417088 Q6ZRN7 208 aaPredicted RBP10.17□□□□□ -0.78
RPS28-201ENST00000417088 EIF4E3Q8N5X7 224 aaKnown RBP10.17□□□□□ -0.78
RPS28-201ENST00000417088 TMEM252Q8N6L7 170 aa10.17□□□□□ -0.78
RPS28-201ENST00000417088 TIMM9Q9Y5J7 89 aa10.17□□□□□ -0.78
RPS28-201ENST00000417088 SPINK4O60575 86 aa10.16□□□□□ -0.78
RPS28-201ENST00000417088 CRISP2P16562 243 aa10.16□□□□□ -0.78
RPS28-201ENST00000417088 TCL1AP56279 114 aa10.16□□□□□ -0.78
RPS28-201ENST00000417088 S100A10P60903 97 aa10.16□□□□□ -0.78
RPS28-201ENST00000417088 PDE6HQ13956 83 aa10.16□□□□□ -0.78
RPS28-201ENST00000417088 EXOC3-AS1Q8N2X6 119 aa10.16□□□□□ -0.78
RPS28-201ENST00000417088 SIVA1O15304 175 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 MPDU1O75352 247 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 FGF7P21781 194 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 HBG1P69891 147 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 HBG2P69892 147 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 RAB32Q13637 225 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 ATP6V1FQ16864 119 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 GCSAMLQ5JQS6 135 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 IBA57Q5T440 356 aaKnown RBP10.15□□□□□ -0.78
RPS28-201ENST00000417088 C9orf47Q6ZRZ4 202 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 ZFAND2AQ8N6M9 145 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 BLNKQ8WV28 456 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 NUDT15Q9NV35 164 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 TP53TG3Q9ULZ0 132 aa10.15□□□□□ -0.78
RPS28-201ENST00000417088 IGKV2-40A0A087WW87 121 aaPredicted RBP10.14□□□□□ -0.79
RPS28-201ENST00000417088 PAX4O43316 350 aa10.14□□□□□ -0.79
RPS28-201ENST00000417088 IGKV2D-40P01614 121 aaPredicted RBP10.14□□□□□ -0.79
RPS28-201ENST00000417088 GPX1P07203 203 aa10.14□□□□□ -0.79
RPS28-201ENST00000417088 NMBP08949 121 aa10.14□□□□□ -0.79
RPS28-201ENST00000417088 ICAM4Q14773 271 aa10.14□□□□□ -0.79
RPS28-201ENST00000417088 PRR9Q5T870 116 aa10.14□□□□□ -0.79
RPS28-201ENST00000417088 Q6ZQT7 251 aa10.14□□□□□ -0.79
RPS28-201ENST00000417088 STX12Q86Y82 276 aa10.14□□□□□ -0.79
RPS28-201ENST00000417088 ST6GAL2Q96JF0 529 aa10.14□□□□□ -0.79
RPS28-201ENST00000417088 VGLL1Q99990 258 aa10.14□□□□□ -0.79
RPS28-201ENST00000417088 SLC25A2Q9BXI2 301 aa10.14□□□□□ -0.79
RPS28-201ENST00000417088 AAMDCQ9H7C9 122 aa10.14□□□□□ -0.79
RPS28-201ENST00000417088 ICOSQ9Y6W8 199 aa10.14□□□□□ -0.79
RPS28-201ENST00000417088 RGS13O14921 159 aa10.13□□□□□ -0.79
RPS28-201ENST00000417088 NXPH4O95158 308 aa10.13□□□□□ -0.79
RPS28-201ENST00000417088 IGHV3-53P01767 116 aa10.13□□□□□ -0.79
RPS28-201ENST00000417088 FAM122CQ6P4D5 195 aa10.13□□□□□ -0.79
RPS28-201ENST00000417088 FAM167A-AS1Q96KT0 104 aa10.13□□□□□ -0.79
RPS28-201ENST00000417088 NPCDR1Q9BY65 106 aa10.13□□□□□ -0.79
RPS28-201ENST00000417088 GPN1Q9HCN4 374 aaPredicted RBP10.13□□□□□ -0.79
RPS28-201ENST00000417088 MRPL16Q9NX20 251 aaKnown RBP10.13□□□□□ -0.79
RPS28-201ENST00000417088 HERC1Q15751 4861 aa10.12□□□□□ -0.79
RPS28-201ENST00000417088 IGHV1OR15-1A0A075B7D0 117 aa10.12□□□□□ -0.79
RPS28-201ENST00000417088 H2AFB2P0C5Z0 115 aa10.12□□□□□ -0.79
RPS28-201ENST00000417088 TMEM78Q5T7P6 136 aa10.12□□□□□ -0.79
RPS28-201ENST00000417088 MIR17HGQ75NE6 70 aa10.12□□□□□ -0.79
RPS28-201ENST00000417088 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
RPS28-201ENST00000417088 ZNF492Q9P255 531 aa10.12□□□□□ -0.79
RPS28-201ENST00000417088 PRO0255Q9UI72 69 aa10.12□□□□□ -0.79
RPS28-201ENST00000417088 TNFRSF18Q9Y5U5 241 aa10.12□□□□□ -0.79
RPS28-201ENST00000417088 NBEAP1P0C6P0 100 aa10.11□□□□□ -0.79
RPS28-201ENST00000417088 FUSP35637 526 aaKnown RBP eCLIP10.11□□□□□ -0.79
RPS28-201ENST00000417088 CRYBA4P53673 196 aa10.11□□□□□ -0.79
RPS28-201ENST00000417088 NHLH2Q02577 135 aa10.11□□□□□ -0.79
RPS28-201ENST00000417088 FHL2Q14192 279 aa10.11□□□□□ -0.79
RPS28-201ENST00000417088 LYPD5Q6UWN5 251 aa10.11□□□□□ -0.79
RPS28-201ENST00000417088 THAP6Q8TBB0 222 aa10.11□□□□□ -0.79
RPS28-201ENST00000417088 OR51M1Q9H341 326 aa10.11□□□□□ -0.79
RPS28-201ENST00000417088 FAT1Q14517 4588 aa10.1□□□□□ -0.79
RPS28-201ENST00000417088 PRAF2O60831 178 aa10.1□□□□□ -0.79
RPS28-201ENST00000417088 SLAQ13239 276 aa10.1□□□□□ -0.79
RPS28-201ENST00000417088 C8orf49Q96NF6 230 aa10.1□□□□□ -0.79
RPS28-201ENST00000417088 ARPC5LQ9BPX5 153 aa10.1□□□□□ -0.79
RPS28-201ENST00000417088 HHLA3Q9XRX5 114 aa10.1□□□□□ -0.79
RPS28-201ENST00000417088 ZNF138P52744 262 aa10.09□□□□□ -0.79
RPS28-201ENST00000417088 ERVFC1-1P60608 527 aa10.09□□□□□ -0.79
RPS28-201ENST00000417088 MRPL23Q16540 153 aaKnown RBP10.09□□□□□ -0.79
RPS28-201ENST00000417088 OR5C1Q8NGR4 320 aa10.09□□□□□ -0.79
RPS28-201ENST00000417088 Q8TAT8 98 aa10.09□□□□□ -0.79
RPS28-201ENST00000417088 FXYD5Q96DB9 178 aa10.09□□□□□ -0.79
RPS28-201ENST00000417088 TRBV7-9A0A0J9YWB2 115 aa10.08□□□□□ -0.8
RPS28-201ENST00000417088 EREGO14944 169 aa10.08□□□□□ -0.8
RPS28-201ENST00000417088 OR10J4P0C629 311 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms