RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 IGKV2-40A0A087WW87 121 aaPredicted RBP12.45□□□□□ -0.42
LSM5-204ENST00000409909 KLLNB2CW77 178 aa12.45□□□□□ -0.42
LSM5-204ENST00000409909 IGKV2D-40P01614 121 aaPredicted RBP12.45□□□□□ -0.42
LSM5-204ENST00000409909 CD300CQ08708 224 aa12.45□□□□□ -0.42
LSM5-204ENST00000409909 PHYHIPLQ96FC7 376 aa12.45□□□□□ -0.42
LSM5-204ENST00000409909 VGLL1Q99990 258 aa12.45□□□□□ -0.42
LSM5-204ENST00000409909 C7orf71A4D174 169 aa12.44□□□□□ -0.42
LSM5-204ENST00000409909 F5H768 121 aa12.44□□□□□ -0.42
LSM5-204ENST00000409909 OR7C2O60412 319 aa12.44□□□□□ -0.42
LSM5-204ENST00000409909 ZNF324O75467 553 aaPredicted RBP12.44□□□□□ -0.42
LSM5-204ENST00000409909 EIF3GO75821 320 aaKnown RBP eCLIP12.44□□□□□ -0.42
LSM5-204ENST00000409909 SLC25A5P05141 298 aaKnown RBP12.44□□□□□ -0.42
LSM5-204ENST00000409909 ATP5G1P05496 136 aa12.44□□□□□ -0.42
LSM5-204ENST00000409909 ATP5G3P48201 142 aa12.44□□□□□ -0.42
LSM5-204ENST00000409909 CCDC28AQ8IWP9 274 aa12.44□□□□□ -0.42
LSM5-204ENST00000409909 CRISP2P16562 243 aa12.43□□□□□ -0.42
LSM5-204ENST00000409909 BTN1A1Q13410 526 aa12.43□□□□□ -0.42
LSM5-204ENST00000409909 LINC00612Q8N6U2 182 aa12.43□□□□□ -0.42
LSM5-204ENST00000409909 PYGO2Q9BRQ0 406 aa12.43□□□□□ -0.42
LSM5-204ENST00000409909 NACAE9PAV3 2078 aa12.42□□□□□ -0.42
LSM5-204ENST00000409909 M0R2N4 97 aa12.42□□□□□ -0.42
LSM5-204ENST00000409909 RNASE4P34096 147 aaKnown RBP12.42□□□□□ -0.42
LSM5-204ENST00000409909 RANP62826 216 aaKnown RBP12.42□□□□□ -0.42
LSM5-204ENST00000409909 RNF212Q495C1 297 aa12.42□□□□□ -0.42
LSM5-204ENST00000409909 PRR9Q5T870 116 aa12.42□□□□□ -0.42
LSM5-204ENST00000409909 UBE2DNLQ8IWF7 75 aa12.42□□□□□ -0.42
LSM5-204ENST00000409909 ZFAND2AQ8N6M9 145 aa12.42□□□□□ -0.42
LSM5-204ENST00000409909 C15orf53Q8NAA6 179 aa12.42□□□□□ -0.42
LSM5-204ENST00000409909 MED28Q9H204 178 aa12.42□□□□□ -0.42
LSM5-204ENST00000409909 UBE2L3P68036 154 aaKnown RBP12.41□□□□□ -0.42
LSM5-204ENST00000409909 Q5BKY6 102 aa12.41□□□□□ -0.42
LSM5-204ENST00000409909 TMEM78Q5T7P6 136 aa12.41□□□□□ -0.42
LSM5-204ENST00000409909 Q6ZQT7 251 aa12.41□□□□□ -0.42
LSM5-204ENST00000409909 ZNF492Q9P255 531 aa12.41□□□□□ -0.42
LSM5-204ENST00000409909 IGLV2-18A0A075B6J9 118 aa12.4□□□□□ -0.42
LSM5-204ENST00000409909 GPX1P07203 203 aa12.4□□□□□ -0.42
LSM5-204ENST00000409909 NMBP08949 121 aa12.4□□□□□ -0.42
LSM5-204ENST00000409909 KHDC3LQ587J8 217 aa12.4□□□□□ -0.42
LSM5-204ENST00000409909 LYPD1Q8N2G4 141 aa12.4□□□□□ -0.42
LSM5-204ENST00000409909 C11orf72Q8NBR9 251 aa12.4□□□□□ -0.42
LSM5-204ENST00000409909 LINC00467Q9BRT7 94 aa12.4□□□□□ -0.42
LSM5-204ENST00000409909 Q9H3A6 140 aa12.4□□□□□ -0.42
LSM5-204ENST00000409909 GAGE12BA1L429 117 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 SNURFLB1AK76 121 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 GAGE7O76087 117 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 GAGE12FP0CL80 117 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 GAGE12GP0CL81 117 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 GAGE12IP0CL82 117 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 M6PRP20645 277 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 ZNF138P52744 262 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 TAS2R45P59539 299 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 RAB2AP61019 212 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 DAZ2Q13117 558 aaKnown RBP12.39□□□□□ -0.43
LSM5-204ENST00000409909 LGALS9BQ3B8N2 356 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 Q8TAT8 98 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 GSN-AS1Q9NRJ2 163 aa12.39□□□□□ -0.43
LSM5-204ENST00000409909 NUDT3O95989 172 aa12.38□□□□□ -0.43
LSM5-204ENST00000409909 HOXA5P20719 270 aa12.38□□□□□ -0.43
LSM5-204ENST00000409909 ACOT6Q3I5F7 207 aaPredicted RBP12.38□□□□□ -0.43
LSM5-204ENST00000409909 ANXA2RQ3ZCQ2 193 aa12.38□□□□□ -0.43
LSM5-204ENST00000409909 Q6ZR54 194 aa12.38□□□□□ -0.43
LSM5-204ENST00000409909 Q6ZTI0 123 aa12.38□□□□□ -0.43
LSM5-204ENST00000409909 AQP10Q96PS8 301 aa12.38□□□□□ -0.43
LSM5-204ENST00000409909 RBAKDNA6NC62 111 aa12.37□□□□□ -0.43
LSM5-204ENST00000409909 RTL8CO15255 209 aa12.37□□□□□ -0.43
LSM5-204ENST00000409909 CSN1S1P47710 185 aa12.37□□□□□ -0.43
LSM5-204ENST00000409909 EIF4E3Q8N5X7 224 aaKnown RBP12.37□□□□□ -0.43
LSM5-204ENST00000409909 TP53TG3Q9ULZ0 132 aa12.37□□□□□ -0.43
LSM5-204ENST00000409909 PKD1P98161 4303 aa12.37□□□□□ -0.43
LSM5-204ENST00000409909 PKHD1P08F94 4074 aa12.37□□□□□ -0.43
LSM5-204ENST00000409909 TRBV7-9A0A0J9YWB2 115 aa12.36□□□□□ -0.43
LSM5-204ENST00000409909 A0A1W2PPV4 95 aa12.36□□□□□ -0.43
LSM5-204ENST00000409909 DIRC3C9JPN6 131 aa12.36□□□□□ -0.43
LSM5-204ENST00000409909 OR5I1Q13606 314 aa12.36□□□□□ -0.43
LSM5-204ENST00000409909 ZNF680Q8NEM1 530 aa12.36□□□□□ -0.43
LSM5-204ENST00000409909 OR10G4Q8NGN3 311 aa12.36□□□□□ -0.43
LSM5-204ENST00000409909 OR10G9Q8NGN4 311 aa12.36□□□□□ -0.43
LSM5-204ENST00000409909 OR10G7Q8NGN6 311 aa12.36□□□□□ -0.43
LSM5-204ENST00000409909 KLF12Q9Y4X4 402 aa12.36□□□□□ -0.43
LSM5-204ENST00000409909 TRAV26-1A0A087WT03 109 aa12.35□□□□□ -0.43
LSM5-204ENST00000409909 HMGB3O15347 200 aaKnown RBP12.35□□□□□ -0.43
LSM5-204ENST00000409909 GIPP09681 153 aaPredicted RBP12.35□□□□□ -0.43
LSM5-204ENST00000409909 LINC00336Q6ZUF6 198 aa12.35□□□□□ -0.43
LSM5-204ENST00000409909 HSD17B11Q8NBQ5 300 aa12.35□□□□□ -0.43
LSM5-204ENST00000409909 HYLS1Q96M11 299 aa12.35□□□□□ -0.43
LSM5-204ENST00000409909 TMPRSS5Q9H3S3 457 aa12.35□□□□□ -0.43
LSM5-204ENST00000409909 OTORQ9NRC9 128 aa12.35□□□□□ -0.43
LSM5-204ENST00000409909 IGHV1OR15-1A0A075B7D0 117 aa12.34□□□□□ -0.43
LSM5-204ENST00000409909 PGPA6NDG6 321 aa12.34□□□□□ -0.43
LSM5-204ENST00000409909 RGS13O14921 159 aa12.34□□□□□ -0.43
LSM5-204ENST00000409909 FAM3BP58499 235 aaPredicted RBP12.34□□□□□ -0.43
LSM5-204ENST00000409909 ZNF266Q14584 549 aa12.34□□□□□ -0.43
LSM5-204ENST00000409909 PQLC2Q6ZP29 291 aa12.34□□□□□ -0.43
LSM5-204ENST00000409909 OR2G3Q8NGZ4 309 aa12.34□□□□□ -0.43
LSM5-204ENST00000409909 RXFP4Q8TDU9 374 aa12.34□□□□□ -0.43
LSM5-204ENST00000409909 ATG101Q9BSB4 218 aa12.34□□□□□ -0.43
LSM5-204ENST00000409909 A0A0J9YY99 117 aa12.33□□□□□ -0.44
LSM5-204ENST00000409909 ATP6V0CP27449 155 aa12.33□□□□□ -0.44
LSM5-204ENST00000409909 TCL1AP56279 114 aa12.33□□□□□ -0.44
LSM5-204ENST00000409909 GNPNAT1Q96EK6 184 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms