RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CNFNQ9BYD5 112 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 PIEZO1Q92508 2521 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 TAX1BP3O14907 124 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 OR5AL1P0C617 328 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 CEACAM3P40198 252 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 MPV17L2Q567V2 206 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 BVES-AS1Q5T3Y7 98 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 A6NJY4 79 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 HES1Q14469 280 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 FAM162BQ5T6X4 162 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 MSRB1Q9NZV6 116 aa7.6□□□□□ -1.19
MSH2-202ENST00000406134 TMSB15BA0A087X1C1 80 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 RIGQ13278 110 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 OCIAD2Q56VL3 154 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 C19orf54Q5BKX5 351 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 Q6AWC8 147 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 Q6ZQT7 251 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 ZNF738Q8NE65 137 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 C11orf21Q9P2W6 132 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 TRAV8-2A0A0B4J237 113 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 A0A1B0GW15 77 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 SMKR1H3BMG3 65 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 FXYD7P58549 80 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 WNK2Q9Y3S1 2297 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 A0A087X0K7 114 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 ERCC8Q13216 396 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 MINOS1Q5TGZ0 78 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 MINOS1-NBL1R4GNA1 71 aa7.59□□□□□ -1.19
MSH2-202ENST00000406134 IGHV3-35A0A0C4DH35 117 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 NCBP2LA6PVI3 153 aaKnown RBP7.58□□□□□ -1.2
MSH2-202ENST00000406134 ATP6V0E1O15342 81 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 BUB3O43684 328 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 NPYP01303 97 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 SRSF2Q01130 221 aaKnown RBP7.58□□□□□ -1.2
MSH2-202ENST00000406134 RNF182Q8N6D2 247 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 AP5S1Q9NUS5 200 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 OOSP1A8MZH6 123 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 TMEM95Q3KNT9 176 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 MAP1LC3CQ9BXW4 147 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 CST9LQ9H4G1 147 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 CUBNO60494 3623 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 IGHV2-70DA0A0C4DH43 119 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 SERTM2A0A1B0GWG4 89 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 RHOGP84095 191 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 PSG9Q00887 426 aa7.58□□□□□ -1.2
MSH2-202ENST00000406134 FAM110DQ8TAY7 271 aaPredicted RBP7.58□□□□□ -1.2
MSH2-202ENST00000406134 TMEM189A5PLL7 270 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 LMO4P61968 165 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 TPPP3Q9BW30 176 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 K7EQM0 130 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 K7ERU9 68 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 KLRB1Q12918 225 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 C15orf32Q32M92 178 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 TIMD4Q96H15 378 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 AAMDCQ9H7C9 122 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 CFAP46Q8IYW2 2715 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 IGKV3D-20A0A0C4DH25 116 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 G3V318 75 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 COX8AP10176 69 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 MEGF9Q9H1U4 602 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 RABAC1Q9UI14 185 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 HSPB8Q9UJY1 196 aa7.57□□□□□ -1.2
MSH2-202ENST00000406134 LOC389332A0A1B0GUA5 103 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 H0Y8G0 127 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 RPL7P18124 248 aaKnown RBP7.56□□□□□ -1.2
MSH2-202ENST00000406134 GPR183P32249 361 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 IL17RELQ6ZVW7 336 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 DEFB125Q8N687 156 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 NPFFR1Q9GZQ6 430 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 TMEM191AQ9H0A3 160 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 IGLV2-18A0A075B6J9 118 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 SAA4P35542 130 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 CCDC144NLQ6NUI1 221 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 PIFOQ8TCI5 191 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 PRELID3AQ96N28 172 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 MS4A6AQ9H2W1 248 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 U3KQE9 123 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 FAM208BQ5VWN6 2430 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 IGHV7-4-1A0A0J9YVY3 117 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 C19orf84I3L1E1 186 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 LINC01559Q495D7 138 aa7.56□□□□□ -1.2
MSH2-202ENST00000406134 FBN2P35556 2912 aa7.55□□□□□ -1.2
MSH2-202ENST00000406134 MAP1AP78559 2803 aaPredicted RBP7.55□□□□□ -1.2
MSH2-202ENST00000406134 UBE2E1P51965 193 aa7.55□□□□□ -1.2
MSH2-202ENST00000406134 SLC25A34Q6PIV7 304 aa7.55□□□□□ -1.2
MSH2-202ENST00000406134 OR10AG1Q8NH19 301 aa7.55□□□□□ -1.2
MSH2-202ENST00000406134 NUDT3O95989 172 aa7.55□□□□□ -1.2
MSH2-202ENST00000406134 PRSS57Q6UWY2 283 aa7.55□□□□□ -1.2
MSH2-202ENST00000406134 GPHB5Q86YW7 130 aa7.55□□□□□ -1.2
MSH2-202ENST00000406134 ORMDL3Q8N138 153 aa7.55□□□□□ -1.2
MSH2-202ENST00000406134 C5orf56Q8N8D9 126 aa7.55□□□□□ -1.2
MSH2-202ENST00000406134 FER1L6-AS1Q8NA97 138 aa7.55□□□□□ -1.2
MSH2-202ENST00000406134 IGHV3-66A0A0C4DH42 116 aa7.54□□□□□ -1.2
MSH2-202ENST00000406134 CLEC3BP05452 202 aa7.54□□□□□ -1.2
MSH2-202ENST00000406134 SCGB2A2Q13296 93 aa7.54□□□□□ -1.2
MSH2-202ENST00000406134 PRR9Q5T870 116 aa7.54□□□□□ -1.2
MSH2-202ENST00000406134 CENPVL3A0A0U1RRI6 287 aa7.54□□□□□ -1.2
MSH2-202ENST00000406134 GATA1P15976 413 aaPredicted RBP7.54□□□□□ -1.2
MSH2-202ENST00000406134 TRGV3P03979 118 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms