RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 IBA57Q5T440 356 aaKnown RBP7.86□□□□□ -1.15
SPTLC1P3-201ENST00000403408 TMEM14EPQ6UXP3 125 aa7.86□□□□□ -1.15
SPTLC1P3-201ENST00000403408 MCUBQ9NWR8 336 aa7.86□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SCP2D1Q9UJQ7 156 aa7.86□□□□□ -1.15
SPTLC1P3-201ENST00000403408 PXMP4Q9Y6I8 212 aa7.86□□□□□ -1.15
SPTLC1P3-201ENST00000403408 IBA57-AS1B1ANH7 110 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 AGPAT2O15120 278 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 NDUFB4O95168 129 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SFT2D2O95562 160 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 OR4E1P0C645 316 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 METTL15P1P0C7V9 234 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SRIP30626 198 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 ZNF415Q09FC8 603 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 PPP1R1AQ13522 171 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 IL18Q14116 193 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 TMEM128Q5BJH2 165 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 BPIFA4PQ86YQ2 179 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SCGB3A2Q96PL1 93 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 MGST2Q99735 147 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SOSTQ9BQB4 213 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 Q9HAA7 133 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 PSENENQ9NZ42 101 aa7.85□□□□□ -1.15
SPTLC1P3-201ENST00000403408 RGS5O15539 181 aa7.84□□□□□ -1.15
SPTLC1P3-201ENST00000403408 PSCAO43653 123 aa7.84□□□□□ -1.15
SPTLC1P3-201ENST00000403408 CRISP2P16562 243 aa7.84□□□□□ -1.15
SPTLC1P3-201ENST00000403408 VAMP1P23763 118 aa7.84□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SLAQ13239 276 aa7.84□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SPCS2Q15005 226 aa7.84□□□□□ -1.15
SPTLC1P3-201ENST00000403408 IQCF2Q8IXL9 164 aa7.84□□□□□ -1.15
SPTLC1P3-201ENST00000403408 Q8N3U1 123 aa7.84□□□□□ -1.15
SPTLC1P3-201ENST00000403408 NPVFQ9HCQ7 196 aa7.84□□□□□ -1.15
SPTLC1P3-201ENST00000403408 CCDC59Q9P031 241 aaKnown RBP7.84□□□□□ -1.15
SPTLC1P3-201ENST00000403408 IGHV1OR15-1A0A075B7D0 117 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 TRGV4A0A0C4DH28 118 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 LECT2O14960 151 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 SSSCA1O60232 199 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 MPDU1O75352 247 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 LINC01556Q5JQF7 62 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 C10orf126Q8N4M7 172 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 OR10G4Q8NGN3 311 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 BLNKQ8WV28 456 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 DIRAS2Q96HU8 199 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 SMIM8Q96KF7 97 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 VCX3AQ9NNX9 186 aa7.83□□□□□ -1.16
SPTLC1P3-201ENST00000403408 IGKV2-40A0A087WW87 121 aaPredicted RBP7.82□□□□□ -1.16
SPTLC1P3-201ENST00000403408 IGHV3-38A0A0C4DH36 116 aa7.82□□□□□ -1.16
SPTLC1P3-201ENST00000403408 FNDC10F2Z333 226 aa7.82□□□□□ -1.16
SPTLC1P3-201ENST00000403408 COX7A2P2O60397 106 aa7.82□□□□□ -1.16
SPTLC1P3-201ENST00000403408 IGKV2D-40P01614 121 aaPredicted RBP7.82□□□□□ -1.16
SPTLC1P3-201ENST00000403408 SMIM18P0DKX4 95 aa7.82□□□□□ -1.16
SPTLC1P3-201ENST00000403408 XP32Q5T750 250 aa7.82□□□□□ -1.16
SPTLC1P3-201ENST00000403408 PXDC1Q5TGL8 231 aa7.82□□□□□ -1.16
SPTLC1P3-201ENST00000403408 OR10P1Q8NGE3 313 aa7.82□□□□□ -1.16
SPTLC1P3-201ENST00000403408 RAB2BQ8WUD1 216 aa7.82□□□□□ -1.16
SPTLC1P3-201ENST00000403408 TRBV19A0A075B6N1 114 aa7.81□□□□□ -1.16
SPTLC1P3-201ENST00000403408 GOSR2O14653 212 aa7.81□□□□□ -1.16
SPTLC1P3-201ENST00000403408 RGS13O14921 159 aa7.81□□□□□ -1.16
SPTLC1P3-201ENST00000403408 C10orf113Q5VZT2 155 aa7.81□□□□□ -1.16
SPTLC1P3-201ENST00000403408 MIC13Q5XKP0 118 aa7.81□□□□□ -1.16
SPTLC1P3-201ENST00000403408 ZNF546Q86UE3 836 aa7.81□□□□□ -1.16
SPTLC1P3-201ENST00000403408 EXOC3-AS1Q8N2X6 119 aa7.81□□□□□ -1.16
SPTLC1P3-201ENST00000403408 CIRBP-AS1Q8TBR5 109 aa7.81□□□□□ -1.16
SPTLC1P3-201ENST00000403408 TRIM63Q969Q1 353 aa7.81□□□□□ -1.16
SPTLC1P3-201ENST00000403408 MRPL53Q96EL3 112 aaKnown RBP7.81□□□□□ -1.16
SPTLC1P3-201ENST00000403408 LINC00477Q96M19 166 aa7.81□□□□□ -1.16
SPTLC1P3-201ENST00000403408 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.8□□□□□ -1.16
SPTLC1P3-201ENST00000403408 ZNF253O75346 499 aa7.8□□□□□ -1.16
SPTLC1P3-201ENST00000403408 IGHV3-30P01768 117 aa7.8□□□□□ -1.16
SPTLC1P3-201ENST00000403408 IGHV3-33P01772 117 aa7.8□□□□□ -1.16
SPTLC1P3-201ENST00000403408 GPX1P07203 203 aa7.8□□□□□ -1.16
SPTLC1P3-201ENST00000403408 IGHV3-30-3P0DP02 117 aa7.8□□□□□ -1.16
SPTLC1P3-201ENST00000403408 IGHV3-30-5P0DP03 117 aa7.8□□□□□ -1.16
SPTLC1P3-201ENST00000403408 TIRAPP58753 221 aa7.8□□□□□ -1.16
SPTLC1P3-201ENST00000403408 C9orf47Q6ZRZ4 202 aa7.8□□□□□ -1.16
SPTLC1P3-201ENST00000403408 RASL10AQ92737 203 aa7.8□□□□□ -1.16
SPTLC1P3-201ENST00000403408 DAZAP1Q96EP5 407 aaKnown RBP7.8□□□□□ -1.16
SPTLC1P3-201ENST00000403408 DNAJC4Q9NNZ3 241 aa7.8□□□□□ -1.16
SPTLC1P3-201ENST00000403408 PYYP10082 97 aa7.79□□□□□ -1.16
SPTLC1P3-201ENST00000403408 GUK1Q16774 197 aa7.79□□□□□ -1.16
SPTLC1P3-201ENST00000403408 MUC21Q5SSG8 566 aa7.79□□□□□ -1.16
SPTLC1P3-201ENST00000403408 S100A7AQ86SG5 101 aa7.79□□□□□ -1.16
SPTLC1P3-201ENST00000403408 Q8TAT8 98 aa7.79□□□□□ -1.16
SPTLC1P3-201ENST00000403408 CHAC1Q9BUX1 264 aa7.79□□□□□ -1.16
SPTLC1P3-201ENST00000403408 IGHV3-16A0A0C4DH30 117 aa7.78□□□□□ -1.16
SPTLC1P3-201ENST00000403408 ORM1P02763 201 aa7.78□□□□□ -1.16
SPTLC1P3-201ENST00000403408 NMBP08949 121 aa7.78□□□□□ -1.16
SPTLC1P3-201ENST00000403408 DYNC2LI1Q8TCX1 351 aa7.78□□□□□ -1.16
SPTLC1P3-201ENST00000403408 PCNPQ8WW12 178 aaKnown RBP7.78□□□□□ -1.16
SPTLC1P3-201ENST00000403408 ARPC5LQ9BPX5 153 aa7.78□□□□□ -1.16
SPTLC1P3-201ENST00000403408 TXNDC17Q9BRA2 123 aa7.78□□□□□ -1.16
SPTLC1P3-201ENST00000403408 ZNF492Q9P255 531 aa7.78□□□□□ -1.16
SPTLC1P3-201ENST00000403408 MGAT4CQ9UBM8 478 aa7.78□□□□□ -1.16
SPTLC1P3-201ENST00000403408 RNF24Q9Y225 148 aa7.78□□□□□ -1.16
SPTLC1P3-201ENST00000403408 C9orf170A2RU37 121 aa7.77□□□□□ -1.17
SPTLC1P3-201ENST00000403408 GATA1P15976 413 aaPredicted RBP7.77□□□□□ -1.17
SPTLC1P3-201ENST00000403408 TNFSF8P32971 234 aa7.77□□□□□ -1.17
SPTLC1P3-201ENST00000403408 ZNF846Q147U1 533 aa7.77□□□□□ -1.17
SPTLC1P3-201ENST00000403408 NRARPQ7Z6K4 114 aa7.77□□□□□ -1.17
SPTLC1P3-201ENST00000403408 DNAJC30Q96LL9 226 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms