RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 U3KQK5 164 aa13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 RNF224P0DH78 156 aa13.6□□□□□ -0.23
HLA-DQB1-204ENST00000399084 FAM104BQ5XKR9 115 aa13.6□□□□□ -0.23
HLA-DQB1-204ENST00000399084 C2orf88Q9BSF0 95 aa13.6□□□□□ -0.23
HLA-DQB1-204ENST00000399084 ABCA2Q9BZC7 2435 aa13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 IGHV3OR16-8A0A075B7F1 116 aa13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 LY6EQ16553 131 aa13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 URB1-AS1Q96HZ7 61 aa13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 TRAV8-2A0A0B4J237 113 aa13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 K7EMT4 169 aa13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 CFHR3Q02985 330 aa13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 Q71RC1 249 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 LRRC75A-AS1Q8N1F1 130 aa13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 LINC00477Q96M19 166 aa13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 TMEM70Q9BUB7 260 aa13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 BEX4Q9NWD9 120 aaPredicted RBP13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 HSPB8Q9UJY1 196 aa13.59□□□□□ -0.23
HLA-DQB1-204ENST00000399084 AKAP6Q13023 2319 aa13.58□□□□□ -0.24
HLA-DQB1-204ENST00000399084 A0A096LNT2 108 aa13.58□□□□□ -0.24
HLA-DQB1-204ENST00000399084 C2orf70A6NJV1 201 aa13.58□□□□□ -0.24
HLA-DQB1-204ENST00000399084 PPBPP02775 128 aa13.58□□□□□ -0.24
HLA-DQB1-204ENST00000399084 HLA-DMBP28068 263 aa13.58□□□□□ -0.24
HLA-DQB1-204ENST00000399084 NPFFR1Q9GZQ6 430 aa13.58□□□□□ -0.24
HLA-DQB1-204ENST00000399084 AGPAT4-IT1Q9H0P7 198 aa13.58□□□□□ -0.24
HLA-DQB1-204ENST00000399084 TRBV7-9A0A0J9YWB2 115 aa13.57□□□□□ -0.24
HLA-DQB1-204ENST00000399084 OVOL1O14753 267 aa13.57□□□□□ -0.24
HLA-DQB1-204ENST00000399084 LEPROTL1O95214 131 aa13.57□□□□□ -0.24
HLA-DQB1-204ENST00000399084 ORM1P02763 201 aa13.57□□□□□ -0.24
HLA-DQB1-204ENST00000399084 PF4V1P10720 104 aa13.57□□□□□ -0.24
HLA-DQB1-204ENST00000399084 ZNF80P51504 273 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQB1-204ENST00000399084 ORMDL3Q8N138 153 aa13.57□□□□□ -0.24
HLA-DQB1-204ENST00000399084 ZNF843Q8N446 348 aa13.57□□□□□ -0.24
HLA-DQB1-204ENST00000399084 Q8TAT8 98 aa13.57□□□□□ -0.24
HLA-DQB1-204ENST00000399084 C16orf92Q96LL3 132 aa13.57□□□□□ -0.24
HLA-DQB1-204ENST00000399084 TMEM191AQ9H0A3 160 aa13.57□□□□□ -0.24
HLA-DQB1-204ENST00000399084 LAMTOR2Q9Y2Q5 125 aa13.57□□□□□ -0.24
HLA-DQB1-204ENST00000399084 BLCAPP62952 87 aa13.56□□□□□ -0.24
HLA-DQB1-204ENST00000399084 OR4X2Q8NGF9 303 aa13.56□□□□□ -0.24
HLA-DQB1-204ENST00000399084 TPPP3Q9BW30 176 aa13.56□□□□□ -0.24
HLA-DQB1-204ENST00000399084 AP5S1Q9NUS5 200 aa13.56□□□□□ -0.24
HLA-DQB1-204ENST00000399084 LINC00527Q9UJ94 153 aa13.56□□□□□ -0.24
HLA-DQB1-204ENST00000399084 IGHV1-24A0A0C4DH33 117 aa13.56□□□□□ -0.24
HLA-DQB1-204ENST00000399084 PRAC2D3DTV9 90 aa13.56□□□□□ -0.24
HLA-DQB1-204ENST00000399084 M0R143 59 aa13.56□□□□□ -0.24
HLA-DQB1-204ENST00000399084 AVPP01185 164 aa13.56□□□□□ -0.24
HLA-DQB1-204ENST00000399084 IGFL4Q6B9Z1 124 aa13.56□□□□□ -0.24
HLA-DQB1-204ENST00000399084 PAM16Q9Y3D7 125 aa13.56□□□□□ -0.24
HLA-DQB1-204ENST00000399084 RNF114Q9Y508 228 aa13.56□□□□□ -0.24
HLA-DQB1-204ENST00000399084 IGHV3-66A0A0C4DH42 116 aa13.55□□□□□ -0.24
HLA-DQB1-204ENST00000399084 FAM106AQ4KMX7 169 aa13.55□□□□□ -0.24
HLA-DQB1-204ENST00000399084 EBLN2Q6P2I7 272 aa13.55□□□□□ -0.24
HLA-DQB1-204ENST00000399084 RNF182Q8N6D2 247 aa13.55□□□□□ -0.24
HLA-DQB1-204ENST00000399084 ERCC8Q13216 396 aa13.54□□□□□ -0.24
HLA-DQB1-204ENST00000399084 FOXE3Q13461 319 aa13.54□□□□□ -0.24
HLA-DQB1-204ENST00000399084 PET117Q6UWS5 81 aa13.54□□□□□ -0.24
HLA-DQB1-204ENST00000399084 FA2HQ7L5A8 372 aa13.54□□□□□ -0.24
HLA-DQB1-204ENST00000399084 GPHB5Q86YW7 130 aa13.54□□□□□ -0.24
HLA-DQB1-204ENST00000399084 PRSS3P2Q8NHM4 247 aa13.54□□□□□ -0.24
HLA-DQB1-204ENST00000399084 DAZ1Q9NQZ3 744 aaKnown RBP13.54□□□□□ -0.24
HLA-DQB1-204ENST00000399084 TRAV9-2A0A087WT02 112 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 TWIST1Q15672 202 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 TDRG1Q3Y452 100 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 MAP1LC3CQ9BXW4 147 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 PEF1Q9UBV8 284 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 UQCR10Q9UDW1 63 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 MAST4O15021 2626 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 TMSB15BA0A087X1C1 80 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 ZNF207O43670 478 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 SPATA45Q537H7 98 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 IL17RELQ6ZVW7 336 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 SPATA12Q7Z6I5 190 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 OR10J6PQ8NGY7 276 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 OR10AG1Q8NH19 301 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 PRELID3AQ96N28 172 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 PSMG3-AS1Q96PY0 264 aa13.53□□□□□ -0.24
HLA-DQB1-204ENST00000399084 IGHV7-4-1A0A0J9YVY3 117 aa13.52□□□□□ -0.25
HLA-DQB1-204ENST00000399084 SYS1-DBNDD2H3BUS1 97 aa13.52□□□□□ -0.25
HLA-DQB1-204ENST00000399084 TGFAP01135 160 aa13.52□□□□□ -0.25
HLA-DQB1-204ENST00000399084 PSMB8P28062 276 aa13.52□□□□□ -0.25
HLA-DQB1-204ENST00000399084 DEFB112Q30KQ8 113 aa13.52□□□□□ -0.25
HLA-DQB1-204ENST00000399084 UNQ9165/PRO28630Q6UXU0 137 aa13.52□□□□□ -0.25
HLA-DQB1-204ENST00000399084 ZNF575Q86XF7 245 aa13.52□□□□□ -0.25
HLA-DQB1-204ENST00000399084 KLK15Q9H2R5 256 aa13.52□□□□□ -0.25
HLA-DQB1-204ENST00000399084 CFAP46Q8IYW2 2715 aa13.52□□□□□ -0.25
HLA-DQB1-204ENST00000399084 IGHV4-4A0A075B6R2 117 aa13.51□□□□□ -0.25
HLA-DQB1-204ENST00000399084 IGHV3OR16-13A0A075B7E8 117 aa13.51□□□□□ -0.25
HLA-DQB1-204ENST00000399084 IGHV3-74A0A0B4J1X5 117 aa13.51□□□□□ -0.25
HLA-DQB1-204ENST00000399084 TMEM213A2RRL7 107 aa13.51□□□□□ -0.25
HLA-DQB1-204ENST00000399084 SOCS3O14543 225 aa13.51□□□□□ -0.25
HLA-DQB1-204ENST00000399084 FSHBP01225 129 aa13.51□□□□□ -0.25
HLA-DQB1-204ENST00000399084 CACNG7P62955 275 aa13.51□□□□□ -0.25
HLA-DQB1-204ENST00000399084 ZNF705AQ6ZN79 300 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQB1-204ENST00000399084 UFC1Q9Y3C8 167 aa13.51□□□□□ -0.25
HLA-DQB1-204ENST00000399084 SPTAN1Q13813 2472 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB1-204ENST00000399084 IGHV3-49A0A0A0MS15 119 aa13.5□□□□□ -0.25
HLA-DQB1-204ENST00000399084 PRB1P04280 392 aa13.5□□□□□ -0.25
HLA-DQB1-204ENST00000399084 MRPL51Q4U2R6 128 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-204ENST00000399084 SMIM15Q7Z3B0 74 aa13.5□□□□□ -0.25
HLA-DQB1-204ENST00000399084 ZNF738Q8NE65 137 aa13.5□□□□□ -0.25
HLA-DQB1-204ENST00000399084 SMPXQ9UHP9 88 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms