RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IGHV3OR16-13A0A075B7E8 117 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 IGHV3-74A0A0B4J1X5 117 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 SPAARA0A1B0GVQ0 90 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 OVOL3O00110 214 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 CD40P25942 277 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 SIGLEC15Q6ZMC9 328 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 PPP1R27Q86WC6 154 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 AAMDCQ9H7C9 122 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 SIGLEC9Q9Y336 463 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 AGRNO00468 2067 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 ASH1LQ9NR48 2969 aaKnown RBP7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 TRAV17A0A0B4J275 112 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 CRYGCP07315 174 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 INSL3P51460 131 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 RELNP78509 3460 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 LRBAP50851 2863 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 IGLV3-9A0A075B6K5 115 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 TRAV40A0A0B4J280 105 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 NDUFA3O95167 84 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 EGR2P11161 476 aaPredicted RBP7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 MRGPRG-AS1Q2M3A8 158 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 VGLL1Q99990 258 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 CTSZQ9UBR2 303 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 RAI1Q7Z5J4 1906 aaPredicted RBP7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 TRBV25-1A0A075B6N4 114 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 IGHV3-66A0A0C4DH42 116 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 GAGE12HA6NDE8 117 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 CD59P13987 128 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 MC5RP33032 325 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 HES1Q14469 280 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 RNF125Q96EQ8 232 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 TRAV26-2A0A0B4J265 109 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 TMEM8BA6NDV4 472 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 SPRY2O43597 315 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 ZNF80P51504 273 aaPredicted RBP7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 TMEM158Q8WZ71 300 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 ZNF479Q96JC4 524 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 HIST1H4GQ99525 98 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 J3KRW8 73 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 TCF15Q12870 199 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 RPEQ96AT9 228 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 MAP1LC3AQ9H492 121 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 DYNLRB1Q9NP97 96 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 UFC1Q9Y3C8 167 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 C17orf100A8MU93 164 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 IGHV1-8P0DP01 117 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 ERCC8Q13216 396 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 MAPKAPK5-AS1Q8N8E1 139 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 SHANK2-AS3Q9BTD1 123 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 NCOR1P1Q9H4R4 102 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 CHTOPQ9Y3Y2 248 aaKnown RBP7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 WI2-2373I1.2A0A1W2PRP0 233 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 IGKCP01834 107 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 LOXP28300 417 aaPredicted RBP7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 ZNF562Q6V9R5 426 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 ZNF491Q8N8L2 437 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 LINC00574Q9H8X3 128 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 IGHV3-49A0A0A0MS15 119 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 A0A1B0GWB2 263 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 TEX22C9J3V5 150 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 TGFAP01135 160 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 MRPL35Q9NZE8 188 aaKnown RBP7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 INS-IGF2F8WCM5 200 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 EFNA4P52798 201 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 ADIPOQQ15848 244 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 SPAG8Q99932 426 aaPredicted RBP7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 IGHV1-3A0A0C4DH29 117 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 C16orf97H3BN30 126 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 TMEM178BH3BS89 294 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 I3L2K1 104 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 CDX4O14627 284 aaPredicted RBP7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 FTH1P19P0C7X4 201 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 CD300EQ496F6 205 aaPredicted RBP7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 TEX36Q5VZQ5 186 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 FAM215AQ9Y5M1 114 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 TNFRSF6BO95407 300 aa7.71□□□□□ -1.17
PTCHD4-202ENST00000398738 RAB9AP51151 201 aa7.71□□□□□ -1.17
PTCHD4-202ENST00000398738 BSPH1Q075Z2 132 aa7.71□□□□□ -1.17
PTCHD4-202ENST00000398738 SPTAN1Q13813 2472 aaKnown RBP7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 A0A1B0GW15 77 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 J3QR89 54 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 CEACAM3P40198 252 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 SCGB2A2Q13296 93 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 Q6AWC8 147 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 CFAP161Q6P656 301 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 TNFRSF14Q92956 283 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 HHLA3Q9XRX5 114 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 CYSLTR1Q9Y271 337 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 IGLL5B9A064 214 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 K7EIM0 57 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 SIVA1O15304 175 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 NBL1P41271 181 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 CKS1BP61024 79 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 CCDC144NLQ6NUI1 221 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 CEND1Q8N111 149 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 C20orf78Q9BR46 151 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 TMEM14CQ9P0S9 112 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 H3BRN7 92 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 PRRG2O14669 202 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms