RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 TMEM191AQ9H0A3 160 aa4.9□□□□□ -1.62
SMCO1-201ENST00000397537 PARP12Q9H0J9 701 aaKnown RBP4.9□□□□□ -1.62
SMCO1-201ENST00000397537 PCTPQ9UKL6 214 aa4.9□□□□□ -1.62
SMCO1-201ENST00000397537 ANK1P16157 1881 aa4.9□□□□□ -1.62
SMCO1-201ENST00000397537 HELZP42694 1942 aaKnown RBP4.9□□□□□ -1.62
SMCO1-201ENST00000397537 FXYD1O00168 92 aa4.9□□□□□ -1.63
SMCO1-201ENST00000397537 SOD1P00441 154 aa4.9□□□□□ -1.63
SMCO1-201ENST00000397537 OPRM1P35372 400 aa4.9□□□□□ -1.63
SMCO1-201ENST00000397537 OPRK1P41145 380 aa4.9□□□□□ -1.63
SMCO1-201ENST00000397537 RPS11P62280 158 aaKnown RBP eCLIP4.9□□□□□ -1.63
SMCO1-201ENST00000397537 LHFPL1Q86WI0 220 aa4.9□□□□□ -1.63
SMCO1-201ENST00000397537 OR5D14Q8NGL3 314 aa4.9□□□□□ -1.63
SMCO1-201ENST00000397537 SGMS2Q8NHU3 365 aa4.9□□□□□ -1.63
SMCO1-201ENST00000397537 OR2A5Q96R48 311 aa4.9□□□□□ -1.63
SMCO1-201ENST00000397537 ZNF492Q9P255 531 aa4.9□□□□□ -1.63
SMCO1-201ENST00000397537 HIVEP1P15822 2718 aa4.9□□□□□ -1.63
SMCO1-201ENST00000397537 GON4LQ3T8J9 2241 aa4.9□□□□□ -1.63
SMCO1-201ENST00000397537 CELSR1Q9NYQ6 3014 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 BOD1L1Q8NFC6 3051 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 KNTC1P50748 2209 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 NOTCH4Q99466 2003 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 ADAMTS9Q9P2N4 1935 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 IGHV3-74A0A0B4J1X5 117 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 A0A1W2PPM0 123 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 ARRDC5A6NEK1 342 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 ZNF727A8MUV8 499 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 IGLV3-27P01718 113 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 IGHV3-23P01764 117 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 GYPAP02724 150 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 FKBP2P26885 142 aaKnown RBP4.89□□□□□ -1.63
SMCO1-201ENST00000397537 TWIST1Q15672 202 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 MSMO1Q15800 293 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 MPV17LQ2QL34 196 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 MPV17L2Q567V2 206 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 TMEM14EPQ6UXP3 125 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 C10orf111Q8N326 155 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 SIGLECL1Q8N7X8 197 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 PGLYRP2Q96PD5 576 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 TM2D3Q9BRN9 247 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 CACNG5Q9UF02 275 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 CRYBG3Q68DQ2 2970 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 ADGRG4Q8IZF6 3080 aa4.89□□□□□ -1.63
SMCO1-201ENST00000397537 COX7A2LO14548 114 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 KLF7O75840 302 aaPredicted RBP4.88□□□□□ -1.63
SMCO1-201ENST00000397537 NCR2O95944 276 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 MT-ATP8P03928 68 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 BCL2P10415 239 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 EIF3IQ13347 325 aaKnown RBP4.88□□□□□ -1.63
SMCO1-201ENST00000397537 MORN3Q6PF18 240 aaPredicted RBP4.88□□□□□ -1.63
SMCO1-201ENST00000397537 LYPD2Q6UXB3 125 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 NPBQ8NG41 125 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 ZC2HC1AQ96GY0 325 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 SCRT1Q9BWW7 348 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 ABRACLQ9P1F3 81 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 SPENQ96T58 3664 aaKnown RBP4.88□□□□□ -1.63
SMCO1-201ENST00000397537 SCN1AP35498 2009 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 MUC21A0A0G2JKD1 596 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 MUC21A0A140T8X8 626 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 IGLV2-23P01705 113 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 RBMXP38159 391 aaKnown RBP4.88□□□□□ -1.63
SMCO1-201ENST00000397537 DIAPH2-AS1Q14236 149 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 C2orf15Q8WU43 125 aaKnown RBP4.88□□□□□ -1.63
SMCO1-201ENST00000397537 LINC00597Q9H2U6 94 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 CYTL1Q9NRR1 136 aa4.88□□□□□ -1.63
SMCO1-201ENST00000397537 NIPBLQ6KC79 2804 aaeCLIP4.87□□□□□ -1.63
SMCO1-201ENST00000397537 TNRC6BQ9UPQ9 1833 aaKnown RBP4.87□□□□□ -1.63
SMCO1-201ENST00000397537 SOCS1O15524 211 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 SNCGO76070 127 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 LTAP01374 205 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 C1QAP02745 245 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 MT-ND6P03923 174 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 FOXF1Q12946 379 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 LYRM7Q5U5X0 104 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 SLC25A34Q6PIV7 304 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 SSX8Q7RTT4 187 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 MRPL30Q8TCC3 161 aaKnown RBP4.87□□□□□ -1.63
SMCO1-201ENST00000397537 RAB37Q96AX2 223 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 AQP10Q96PS8 301 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 GPX7Q96SL4 187 aaPredicted RBP4.87□□□□□ -1.63
SMCO1-201ENST00000397537 CCDC88CQ9P219 2028 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 LAMTOR3Q9UHA4 124 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 MPC1Q9Y5U8 109 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 CSMD1Q96PZ7 3565 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 DOCK7Q96N67 2140 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 PCDH15Q96QU1 1955 aa4.87□□□□□ -1.63
SMCO1-201ENST00000397537 DPRXA6NFQ7 191 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 SOCS3O14543 225 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 PITX3O75364 302 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 P0DMU3 169 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 FAM231AP0DMU4 169 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 FAM231CP0DMU5 169 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 PTHLHP12272 177 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 ASIPP42127 132 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 AMTNQ6UX39 209 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 C18orf32Q8TCD1 76 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 VGLL1Q99990 258 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 NBASA2RRP1 2371 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 NUP210Q8TEM1 1887 aaPredicted RBP4.86□□□□□ -1.63
SMCO1-201ENST00000397537 TRBV20OR9-2A0A075B6H5 130 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 TMEM258P61165 79 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms