RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 SIGLECL1Q8N7X8 197 aa11.46□□□□□ -0.58
CBX3-202ENST00000396386 CLEC5AQ9NY25 188 aa11.46□□□□□ -0.58
CBX3-202ENST00000396386 VPREB3Q9UKI3 123 aa11.46□□□□□ -0.58
CBX3-202ENST00000396386 ARMS2P0C7Q2 107 aa11.45□□□□□ -0.58
CBX3-202ENST00000396386 RPS20P60866 119 aaKnown RBP11.45□□□□□ -0.58
CBX3-202ENST00000396386 LCNL1Q6ZST4 164 aa11.45□□□□□ -0.58
CBX3-202ENST00000396386 Q6ZWC4 215 aa11.45□□□□□ -0.58
CBX3-202ENST00000396386 Q96MF0 132 aa11.45□□□□□ -0.58
CBX3-202ENST00000396386 NPFFR1Q9GZQ6 430 aa11.45□□□□□ -0.58
CBX3-202ENST00000396386 CENPEQ02224 2701 aa11.45□□□□□ -0.58
CBX3-202ENST00000396386 SCGB1D1O95968 90 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 PMCHP20382 165 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 FBN2P35556 2912 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 AMTP48728 403 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 ERCC8Q13216 396 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 ITPR2Q14571 2701 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 GATD1Q8NB37 220 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 CSMD1Q96PZ7 3565 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 CRYBG3Q68DQ2 2970 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 A0A1W2PS18 150 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 TMEM89A2RUT3 159 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 ZNF324O75467 553 aaPredicted RBP11.44□□□□□ -0.58
CBX3-202ENST00000396386 GPX1P07203 203 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 PKIAP61925 76 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 C16orf92Q96LL3 132 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 TPPP3Q9BW30 176 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 NAGKQ9UJ70 344 aa11.44□□□□□ -0.58
CBX3-202ENST00000396386 TMSB15BA0A087X1C1 80 aa11.43□□□□□ -0.58
CBX3-202ENST00000396386 LOC102724200A0A096LPH7 203 aaPredicted RBP11.43□□□□□ -0.58
CBX3-202ENST00000396386 TSTD3H0UI37 97 aa11.43□□□□□ -0.58
CBX3-202ENST00000396386 SMAD7O15105 426 aaKnown RBP11.43□□□□□ -0.58
CBX3-202ENST00000396386 PSMB8P28062 276 aa11.43□□□□□ -0.58
CBX3-202ENST00000396386 ZNF80P51504 273 aaPredicted RBP11.43□□□□□ -0.58
CBX3-202ENST00000396386 SRSF2Q01130 221 aaKnown RBP11.43□□□□□ -0.58
CBX3-202ENST00000396386 PRR31Q5SQ13 230 aa11.43□□□□□ -0.58
CBX3-202ENST00000396386 PRSS57Q6UWY2 283 aa11.43□□□□□ -0.58
CBX3-202ENST00000396386 Q6YL49 198 aa11.43□□□□□ -0.58
CBX3-202ENST00000396386 PRRC2AP48634 2157 aaKnown RBP11.43□□□□□ -0.58
CBX3-202ENST00000396386 TMEM78Q5T7P6 136 aa11.42□□□□□ -0.58
CBX3-202ENST00000396386 PSMG3-AS1Q96PY0 264 aa11.42□□□□□ -0.58
CBX3-202ENST00000396386 PEF1Q9UBV8 284 aaKnown RBP11.42□□□□□ -0.58
CBX3-202ENST00000396386 MYO9AB2RTY4 2548 aa11.42□□□□□ -0.58
CBX3-202ENST00000396386 ZNF138P52744 262 aa11.42□□□□□ -0.58
CBX3-202ENST00000396386 CYB5R2Q6BCY4 276 aa11.42□□□□□ -0.58
CBX3-202ENST00000396386 IL17RELQ6ZVW7 336 aa11.42□□□□□ -0.58
CBX3-202ENST00000396386 KRTAP1-3Q8IUG1 177 aa11.42□□□□□ -0.58
CBX3-202ENST00000396386 IGHV7-4-1A0A0J9YVY3 117 aa11.41□□□□□ -0.58
CBX3-202ENST00000396386 FABP5P3A8MUU1 101 aa11.41□□□□□ -0.58
CBX3-202ENST00000396386 RNASEKQ6P5S7 137 aaKnown RBP11.41□□□□□ -0.58
CBX3-202ENST00000396386 AGPAT4-IT1Q9H0P7 198 aa11.41□□□□□ -0.58
CBX3-202ENST00000396386 DAZ1Q9NQZ3 744 aaKnown RBP11.41□□□□□ -0.58
CBX3-202ENST00000396386 CELSR2Q9HCU4 2923 aa11.41□□□□□ -0.58
CBX3-202ENST00000396386 HSBP1O75506 76 aa11.4□□□□□ -0.58
CBX3-202ENST00000396386 CTRLP40313 264 aa11.4□□□□□ -0.58
CBX3-202ENST00000396386 LYZL1Q6UWQ5 148 aa11.4□□□□□ -0.58
CBX3-202ENST00000396386 C9orf47Q6ZRZ4 202 aa11.4□□□□□ -0.58
CBX3-202ENST00000396386 ZNF738Q8NE65 137 aa11.4□□□□□ -0.58
CBX3-202ENST00000396386 PRO1933Q9H354 126 aa11.4□□□□□ -0.58
CBX3-202ENST00000396386 NRN1Q9NPD7 142 aa11.4□□□□□ -0.58
CBX3-202ENST00000396386 VPS13CQ709C8 3753 aa11.4□□□□□ -0.58
CBX3-202ENST00000396386 GPHB5Q86YW7 130 aa11.4□□□□□ -0.59
CBX3-202ENST00000396386 FER1L6-AS1Q8NA97 138 aa11.4□□□□□ -0.59
CBX3-202ENST00000396386 SOCS3O14543 225 aa11.39□□□□□ -0.59
CBX3-202ENST00000396386 HOXA3O43365 443 aaPredicted RBP11.39□□□□□ -0.59
CBX3-202ENST00000396386 ORM1P02763 201 aa11.39□□□□□ -0.59
CBX3-202ENST00000396386 ZNF705DP0CH99 300 aaPredicted RBP11.39□□□□□ -0.59
CBX3-202ENST00000396386 ZNF705BP0CI00 300 aaPredicted RBP11.39□□□□□ -0.59
CBX3-202ENST00000396386 NTF3P20783 257 aa11.39□□□□□ -0.59
CBX3-202ENST00000396386 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
CBX3-202ENST00000396386 FAM106AQ4KMX7 169 aa11.39□□□□□ -0.59
CBX3-202ENST00000396386 ZNF702PQ9H963 129 aa11.39□□□□□ -0.59
CBX3-202ENST00000396386 PPP1R14DQ9NXH3 145 aa11.39□□□□□ -0.59
CBX3-202ENST00000396386 SVEP1Q4LDE5 3571 aa11.39□□□□□ -0.59
CBX3-202ENST00000396386 K7EMT4 169 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 IGLC6P0CF74 106 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 KRTDAPP60985 99 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 HIST1H1AQ02539 215 aaPredicted RBP11.38□□□□□ -0.59
CBX3-202ENST00000396386 TM4SF20Q53R12 229 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 ZNF493Q6ZR52 646 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 NIT1Q86X76 327 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 C20orf173Q96LM9 149 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 RHPN1-AS1Q9BWJ2 59 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 CD33P20138 364 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 C10orf99Q6UWK7 81 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 FAM19A2Q8N3H0 131 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 ZNF664Q8N3J9 261 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 RNF114Q9Y508 228 aa11.38□□□□□ -0.59
CBX3-202ENST00000396386 OVOL1O14753 267 aa11.37□□□□□ -0.59
CBX3-202ENST00000396386 FOXE3Q13461 319 aa11.37□□□□□ -0.59
CBX3-202ENST00000396386 LURAP1LQ8IV03 231 aa11.37□□□□□ -0.59
CBX3-202ENST00000396386 CHCHD1Q96BP2 118 aaKnown RBP11.37□□□□□ -0.59
CBX3-202ENST00000396386 SMPXQ9UHP9 88 aa11.37□□□□□ -0.59
CBX3-202ENST00000396386 UFC1Q9Y3C8 167 aa11.37□□□□□ -0.59
CBX3-202ENST00000396386 LENEPQ9Y5L5 61 aa11.37□□□□□ -0.59
CBX3-202ENST00000396386 TMEM213A2RRL7 107 aa11.36□□□□□ -0.59
CBX3-202ENST00000396386 M0R2Z0 102 aa11.36□□□□□ -0.59
CBX3-202ENST00000396386 DDTP30046 118 aa11.36□□□□□ -0.59
CBX3-202ENST00000396386 RPL11P62913 178 aaKnown RBP11.36□□□□□ -0.59
CBX3-202ENST00000396386 OR10J6PQ8NGY7 276 aa11.36□□□□□ -0.59
CBX3-202ENST00000396386 URB1-AS1Q96HZ7 61 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms