RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 TRIP6Q15654 476 aaKnown RBP13.63□□□□□ -0.23
SREBF1-203ENST00000395751 GATD1Q8NB37 220 aa13.63□□□□□ -0.23
SREBF1-203ENST00000395751 IGHV1-46P01743 117 aa13.63□□□□□ -0.23
SREBF1-203ENST00000395751 SPTAN1Q13813 2472 aaKnown RBP13.62□□□□□ -0.23
SREBF1-203ENST00000395751 SRD5A1P18405 259 aa13.62□□□□□ -0.23
SREBF1-203ENST00000395751 FAM27E3Q08E93 113 aa13.62□□□□□ -0.23
SREBF1-203ENST00000395751 TMEM200BQ69YZ2 307 aa13.62□□□□□ -0.23
SREBF1-203ENST00000395751 Q6ZSR3 168 aa13.62□□□□□ -0.23
SREBF1-203ENST00000395751 C9orf106Q8NAJ2 232 aa13.62□□□□□ -0.23
SREBF1-203ENST00000395751 HELZP42694 1942 aaKnown RBP13.62□□□□□ -0.23
SREBF1-203ENST00000395751 J3QQQ9 107 aa13.62□□□□□ -0.23
SREBF1-203ENST00000395751 K7EMI3 77 aa13.62□□□□□ -0.23
SREBF1-203ENST00000395751 PRB3Q04118 309 aaPredicted RBP13.62□□□□□ -0.23
SREBF1-203ENST00000395751 LINC00477Q96M19 166 aa13.62□□□□□ -0.23
SREBF1-203ENST00000395751 ACYP1P07311 99 aa13.61□□□□□ -0.23
SREBF1-203ENST00000395751 C1orf210Q8IVY1 113 aa13.61□□□□□ -0.23
SREBF1-203ENST00000395751 THAP8Q8NA92 274 aa13.61□□□□□ -0.23
SREBF1-203ENST00000395751 SPANXB1Q9NS25 103 aaPredicted RBP13.61□□□□□ -0.23
SREBF1-203ENST00000395751 SIGLEC15Q6ZMC9 328 aa13.61□□□□□ -0.23
SREBF1-203ENST00000395751 ALPK3Q96L96 1907 aa13.61□□□□□ -0.23
SREBF1-203ENST00000395751 WT1-ASQ06250 92 aa13.61□□□□□ -0.23
SREBF1-203ENST00000395751 IGHV1-3A0A0C4DH29 117 aa13.61□□□□□ -0.23
SREBF1-203ENST00000395751 C9orf139Q6ZV77 190 aa13.61□□□□□ -0.23
SREBF1-203ENST00000395751 ODF3L1Q8IXM7 274 aa13.61□□□□□ -0.23
SREBF1-203ENST00000395751 DNAJC30Q96LL9 226 aa13.61□□□□□ -0.23
SREBF1-203ENST00000395751 K7EM74 188 aa13.6□□□□□ -0.23
SREBF1-203ENST00000395751 ZDBF2Q9HCK1 2354 aa13.6□□□□□ -0.23
SREBF1-203ENST00000395751 IGHV1-8P0DP01 117 aa13.6□□□□□ -0.23
SREBF1-203ENST00000395751 ERCC8Q13216 396 aa13.6□□□□□ -0.23
SREBF1-203ENST00000395751 GTSF1Q8WW33 167 aa13.6□□□□□ -0.23
SREBF1-203ENST00000395751 PIMREGQ9BSJ6 248 aa13.6□□□□□ -0.23
SREBF1-203ENST00000395751 MT-ATP8P03928 68 aa13.6□□□□□ -0.23
SREBF1-203ENST00000395751 C15orf65H3BRN8 121 aa13.6□□□□□ -0.23
SREBF1-203ENST00000395751 TRIOBPQ9H2D6 2365 aa13.59□□□□□ -0.23
SREBF1-203ENST00000395751 DUX3Q96PT4 197 aa13.59□□□□□ -0.23
SREBF1-203ENST00000395751 WDR86Q86TI4 376 aa13.59□□□□□ -0.23
SREBF1-203ENST00000395751 RASL10AQ92737 203 aa13.59□□□□□ -0.23
SREBF1-203ENST00000395751 C1orf43Q9BWL3 253 aa13.59□□□□□ -0.23
SREBF1-203ENST00000395751 TP73-AS1Q9UF72 201 aa13.59□□□□□ -0.23
SREBF1-203ENST00000395751 TRAV26-2A0A0B4J265 109 aa13.58□□□□□ -0.23
SREBF1-203ENST00000395751 SOCS3O14543 225 aa13.58□□□□□ -0.23
SREBF1-203ENST00000395751 LEPROTO15243 131 aa13.58□□□□□ -0.23
SREBF1-203ENST00000395751 LINC00158P58513 81 aa13.58□□□□□ -0.23
SREBF1-203ENST00000395751 TMEM86BQ8N661 226 aa13.58□□□□□ -0.23
SREBF1-203ENST00000395751 SVIPQ8NHG7 77 aa13.58□□□□□ -0.23
SREBF1-203ENST00000395751 ZNF625Q96I27 306 aaPredicted RBP13.58□□□□□ -0.23
SREBF1-203ENST00000395751 GAFA1Q96PS6 74 aa13.58□□□□□ -0.24
SREBF1-203ENST00000395751 ATP1A1-AS1Q5TC04 95 aa13.58□□□□□ -0.24
SREBF1-203ENST00000395751 ZNF71Q9NQZ8 489 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-203ENST00000395751 FAM236AA0A1B0GUQ0 79 aa13.58□□□□□ -0.24
SREBF1-203ENST00000395751 FAM236BA0A1B0GV22 79 aa13.58□□□□□ -0.24
SREBF1-203ENST00000395751 SRRM4A7MD48 611 aaKnown RBP13.58□□□□□ -0.24
SREBF1-203ENST00000395751 C15orf32Q32M92 178 aa13.58□□□□□ -0.24
SREBF1-203ENST00000395751 Q6ZR03 302 aa13.58□□□□□ -0.24
SREBF1-203ENST00000395751 YLPM1P49750 1951 aaKnown RBP13.57□□□□□ -0.24
SREBF1-203ENST00000395751 NLRC5Q86WI3 1866 aa13.57□□□□□ -0.24
SREBF1-203ENST00000395751 FAM57AQ8TBR7 257 aa13.57□□□□□ -0.24
SREBF1-203ENST00000395751 DUX5Q96PT3 197 aa13.57□□□□□ -0.24
SREBF1-203ENST00000395751 ZNF134P52741 427 aa13.57□□□□□ -0.24
SREBF1-203ENST00000395751 PTH2Q96A98 100 aa13.57□□□□□ -0.24
SREBF1-203ENST00000395751 NDUFV3P56181 108 aaKnown RBP13.57□□□□□ -0.24
SREBF1-203ENST00000395751 NTN3O00634 580 aaPredicted RBP13.56□□□□□ -0.24
SREBF1-203ENST00000395751 PAX8Q06710 450 aa13.56□□□□□ -0.24
SREBF1-203ENST00000395751 C3orf36Q3SXR2 165 aa13.56□□□□□ -0.24
SREBF1-203ENST00000395751 ZGRF1Q86YA3 2104 aa13.56□□□□□ -0.24
SREBF1-203ENST00000395751 DEFB124Q8NES8 71 aa13.56□□□□□ -0.24
SREBF1-203ENST00000395751 TRGV11A0A075B6L2 103 aa13.56□□□□□ -0.24
SREBF1-203ENST00000395751 E9PLD3 99 aa13.56□□□□□ -0.24
SREBF1-203ENST00000395751 CR1LQ2VPA4 569 aa13.56□□□□□ -0.24
SREBF1-203ENST00000395751 PRIMA1Q86XR5 153 aa13.56□□□□□ -0.24
SREBF1-203ENST00000395751 C3orf56Q8N813 242 aa13.56□□□□□ -0.24
SREBF1-203ENST00000395751 NCOR1O75376 2440 aa13.56□□□□□ -0.24
SREBF1-203ENST00000395751 TNS1Q9HBL0 1735 aaKnown RBP13.56□□□□□ -0.24
SREBF1-203ENST00000395751 PAX4O43316 350 aa13.55□□□□□ -0.24
SREBF1-203ENST00000395751 LINC01620Q4KN68 170 aa13.55□□□□□ -0.24
SREBF1-203ENST00000395751 CNOT1A5YKK6 2376 aaKnown RBP13.55□□□□□ -0.24
SREBF1-203ENST00000395751 ZNF493Q6ZR52 646 aa13.55□□□□□ -0.24
SREBF1-203ENST00000395751 ZNRD1Q9P1U0 126 aa13.55□□□□□ -0.24
SREBF1-203ENST00000395751 SYNJ2BPP57105 145 aa13.55□□□□□ -0.24
SREBF1-203ENST00000395751 PLXNA2O75051 1894 aa13.55□□□□□ -0.24
SREBF1-203ENST00000395751 BSPH1Q075Z2 132 aa13.55□□□□□ -0.24
SREBF1-203ENST00000395751 NDUFA12Q9UI09 145 aa13.55□□□□□ -0.24
SREBF1-203ENST00000395751 H3BRN7 92 aa13.54□□□□□ -0.24
SREBF1-203ENST00000395751 SPRR3Q9UBC9 169 aa13.54□□□□□ -0.24
SREBF1-203ENST00000395751 FAM167A-AS1Q96KT0 104 aa13.54□□□□□ -0.24
SREBF1-203ENST00000395751 A0A1B0GXF2 115 aa13.54□□□□□ -0.24
SREBF1-203ENST00000395751 A0A087WWL8 130 aa13.54□□□□□ -0.24
SREBF1-203ENST00000395751 DUSP14O95147 198 aaKnown RBP13.54□□□□□ -0.24
SREBF1-203ENST00000395751 C5orf64Q2M2E5 130 aa13.53□□□□□ -0.24
SREBF1-203ENST00000395751 FDCSPQ8NFU4 85 aa13.53□□□□□ -0.24
SREBF1-203ENST00000395751 RNF114Q9Y508 228 aa13.53□□□□□ -0.24
SREBF1-203ENST00000395751 FNDC1Q4ZHG4 1894 aaPredicted RBP13.53□□□□□ -0.24
SREBF1-203ENST00000395751 ATOX1O00244 68 aa13.53□□□□□ -0.24
SREBF1-203ENST00000395751 IGHV3-11P01762 117 aa13.53□□□□□ -0.24
SREBF1-203ENST00000395751 LY6EQ16553 131 aa13.53□□□□□ -0.24
SREBF1-203ENST00000395751 ODF1Q14990 250 aa13.52□□□□□ -0.24
SREBF1-203ENST00000395751 SDHAF1A6NFY7 115 aa13.52□□□□□ -0.24
SREBF1-203ENST00000395751 EGR2P11161 476 aaPredicted RBP13.52□□□□□ -0.24
SREBF1-203ENST00000395751 ZNF833PQ6ZTB9 187 aa13.52□□□□□ -0.24
SREBF1-203ENST00000395751 MRPL23Q16540 153 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms