RNA–Protein interactions for RNA: ENST00000395653.9

CLN3-207, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-207ENST00000395653 ZNF471Q9BX82 626 aaPredicted RBP15.6■□□□□ 0.09
CLN3-207ENST00000395653 hCG_2014768A0A024R1R8 64 aa15.6■□□□□ 0.09
CLN3-207ENST00000395653 LOC102723971A0A1B0GUV8 181 aa15.6■□□□□ 0.09
CLN3-207ENST00000395653 KIR3DS1Q14943 382 aa15.6■□□□□ 0.09
CLN3-207ENST00000395653 ZNF726P1Q15940 193 aa15.6■□□□□ 0.09
CLN3-207ENST00000395653 TMUB2Q71RG4 321 aa15.6■□□□□ 0.09
CLN3-207ENST00000395653 VGLL1Q99990 258 aa15.6■□□□□ 0.09
CLN3-207ENST00000395653 TMEM167BQ9NRX6 74 aa15.6■□□□□ 0.09
CLN3-207ENST00000395653 PGPA6NDG6 321 aa15.59■□□□□ 0.09
CLN3-207ENST00000395653 PFDN1O60925 122 aa15.59■□□□□ 0.09
CLN3-207ENST00000395653 C1QBP02746 253 aa15.59■□□□□ 0.09
CLN3-207ENST00000395653 SEC11BP0C7V7 166 aa15.59■□□□□ 0.09
CLN3-207ENST00000395653 EIF5AP63241 154 aaKnown RBP15.59■□□□□ 0.09
CLN3-207ENST00000395653 AKAP14Q86UN6 197 aa15.59■□□□□ 0.09
CLN3-207ENST00000395653 CMTM2Q8TAZ6 248 aa15.59■□□□□ 0.09
CLN3-207ENST00000395653 LINC01587Q99440 93 aa15.59■□□□□ 0.09
CLN3-207ENST00000395653 ZNF492Q9P255 531 aa15.59■□□□□ 0.09
CLN3-207ENST00000395653 DIRC3C9JPN6 131 aa15.58■□□□□ 0.08
CLN3-207ENST00000395653 H7BYZ3 331 aa15.58■□□□□ 0.08
CLN3-207ENST00000395653 CRISP2P16562 243 aa15.58■□□□□ 0.08
CLN3-207ENST00000395653 TAS2R60P59551 318 aa15.58■□□□□ 0.08
CLN3-207ENST00000395653 CEMP1Q6PRD7 247 aaPredicted RBP15.58■□□□□ 0.08
CLN3-207ENST00000395653 PHLDA1Q8WV24 401 aaPredicted RBP15.58■□□□□ 0.08
CLN3-207ENST00000395653 HYLS1Q96M11 299 aa15.58■□□□□ 0.08
CLN3-207ENST00000395653 CELA1Q9UNI1 258 aa15.58■□□□□ 0.08
CLN3-207ENST00000395653 ZNF705GA8MUZ8 300 aaPredicted RBP15.57■□□□□ 0.08
CLN3-207ENST00000395653 KLLNB2CW77 178 aa15.57■□□□□ 0.08
CLN3-207ENST00000395653 NMBP08949 121 aa15.57■□□□□ 0.08
CLN3-207ENST00000395653 ZNF138P52744 262 aa15.57■□□□□ 0.08
CLN3-207ENST00000395653 EMP1P54849 157 aa15.57■□□□□ 0.08
CLN3-207ENST00000395653 TRBV7-9A0A0J9YWB2 115 aa15.56■□□□□ 0.08
CLN3-207ENST00000395653 TEX48A0A1B0GUV7 120 aa15.56■□□□□ 0.08
CLN3-207ENST00000395653 J3KRW8 73 aa15.56■□□□□ 0.08
CLN3-207ENST00000395653 SPART-AS1P0CW21 52 aa15.56■□□□□ 0.08
CLN3-207ENST00000395653 YTHDF2Q9Y5A9 579 aaKnown RBP15.56■□□□□ 0.08
CLN3-207ENST00000395653 PLECQ15149 4684 aaKnown RBP15.55■□□□□ 0.08
CLN3-207ENST00000395653 LGALSLQ3ZCW2 172 aaPredicted RBP15.55■□□□□ 0.08
CLN3-207ENST00000395653 NIPSNAP3BQ9BS92 247 aa15.55■□□□□ 0.08
CLN3-207ENST00000395653 DKK2Q9UBU2 259 aa15.55■□□□□ 0.08
CLN3-207ENST00000395653 KLK5Q9Y337 293 aaPredicted RBP15.55■□□□□ 0.08
CLN3-207ENST00000395653 TRAV12-3A0A0B4J271 114 aa15.54■□□□□ 0.08
CLN3-207ENST00000395653 C7orf71A4D174 169 aa15.54■□□□□ 0.08
CLN3-207ENST00000395653 UMAD1C9J7I0 102 aa15.54■□□□□ 0.08
CLN3-207ENST00000395653 C11orf94C9JXX5 98 aa15.54■□□□□ 0.08
CLN3-207ENST00000395653 TPT1P13693 172 aaKnown RBP15.54■□□□□ 0.08
CLN3-207ENST00000395653 C12orf74Q32Q52 190 aa15.54■□□□□ 0.08
CLN3-207ENST00000395653 IQCF2Q8IXL9 164 aa15.54■□□□□ 0.08
CLN3-207ENST00000395653 ZFAND2AQ8N6M9 145 aa15.54■□□□□ 0.08
CLN3-207ENST00000395653 TMED6Q8WW62 240 aa15.54■□□□□ 0.08
CLN3-207ENST00000395653 DYNC2H1Q8NCM8 4307 aaKnown RBP15.53■□□□□ 0.08
CLN3-207ENST00000395653 MAP1LC3B2A6NCE7 125 aa15.53■□□□□ 0.08
CLN3-207ENST00000395653 PRM2P04554 102 aa15.53■□□□□ 0.08
CLN3-207ENST00000395653 FAM222AQ5U5X8 452 aa15.53■□□□□ 0.08
CLN3-207ENST00000395653 Q6ZTC4 211 aa15.53■□□□□ 0.08
CLN3-207ENST00000395653 C5orf17Q8NAS9 161 aa15.53■□□□□ 0.08
CLN3-207ENST00000395653 Q8TAT8 98 aa15.53■□□□□ 0.08
CLN3-207ENST00000395653 STOML3Q8TAV4 291 aa15.53■□□□□ 0.08
CLN3-207ENST00000395653 MAP1LC3BQ9GZQ8 125 aa15.53■□□□□ 0.08
CLN3-207ENST00000395653 RPH3ALQ9UNE2 315 aa15.53■□□□□ 0.08
CLN3-207ENST00000395653 LENEPQ9Y5L5 61 aa15.53■□□□□ 0.08
CLN3-207ENST00000395653 A0A1W2PRE2 83 aa15.52■□□□□ 0.08
CLN3-207ENST00000395653 GPX1P07203 203 aa15.52■□□□□ 0.08
CLN3-207ENST00000395653 AZU1P20160 251 aa15.52■□□□□ 0.08
CLN3-207ENST00000395653 ZNF493Q6ZR52 646 aa15.52■□□□□ 0.08
CLN3-207ENST00000395653 C16orf74Q96GX8 76 aa15.52■□□□□ 0.08
CLN3-207ENST00000395653 PYGO2Q9BRQ0 406 aa15.52■□□□□ 0.08
CLN3-207ENST00000395653 PLA2G2EQ9NZK7 142 aa15.52■□□□□ 0.08
CLN3-207ENST00000395653 SERTM2A0A1B0GWG4 89 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 HTN1P15515 57 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 CD300CQ08708 224 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 BTN1A1Q13410 526 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 GOLT1AQ6ZVE7 132 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 TMEM263Q8WUH6 116 aaKnown RBP15.51■□□□□ 0.07
CLN3-207ENST00000395653 TMPRSS5Q9H3S3 457 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 TRAV10A0A0B4J240 114 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 PLAC8L1A1L4L8 177 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 GGTLC3B5MD39 225 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 ZNF324O75467 553 aaPredicted RBP15.51■□□□□ 0.07
CLN3-207ENST00000395653 RNASE4P34096 147 aaKnown RBP15.51■□□□□ 0.07
CLN3-207ENST00000395653 FHITP49789 147 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 FGF8P55075 233 aaPredicted RBP15.51■□□□□ 0.07
CLN3-207ENST00000395653 GNG5P63218 68 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 DPPA3Q6W0C5 159 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 ZNF767PQ75MW2 155 aa15.51■□□□□ 0.07
CLN3-207ENST00000395653 RNASE8Q8TDE3 154 aaKnown RBP15.51■□□□□ 0.07
CLN3-207ENST00000395653 LYRM9A8MSI8 78 aa15.5■□□□□ 0.07
CLN3-207ENST00000395653 SUMO1P63165 101 aaKnown RBP15.5■□□□□ 0.07
CLN3-207ENST00000395653 PRR9Q5T870 116 aa15.5■□□□□ 0.07
CLN3-207ENST00000395653 CCDC28AQ8IWP9 274 aa15.5■□□□□ 0.07
CLN3-207ENST00000395653 A0A1B0GVG6 124 aa15.49■□□□□ 0.07
CLN3-207ENST00000395653 TCRAP04437 139 aa15.49■□□□□ 0.07
CLN3-207ENST00000395653 C2CD4CQ8TF44 421 aa15.49■□□□□ 0.07
CLN3-207ENST00000395653 LINC00467Q9BRT7 94 aa15.49■□□□□ 0.07
CLN3-207ENST00000395653 LCE6AA0A183 80 aa15.48■□□□□ 0.07
CLN3-207ENST00000395653 K7EQM0 130 aa15.48■□□□□ 0.07
CLN3-207ENST00000395653 EIF5AL1Q6IS14 154 aaKnown RBP15.48■□□□□ 0.07
CLN3-207ENST00000395653 FAM213BQ8TBF2 198 aa15.48■□□□□ 0.07
CLN3-207ENST00000395653 MBD3L1Q8WWY6 194 aa15.48■□□□□ 0.07
CLN3-207ENST00000395653 NKX6-2Q9C056 277 aaPredicted RBP15.48■□□□□ 0.07
CLN3-207ENST00000395653 EPDR1Q9UM22 224 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms