RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 GFRA4Q9GZZ7 299 aa11.51□□□□□ -0.57
SCAF11-204ENST00000395454 APOHP02749 345 aaPredicted RBP11.5□□□□□ -0.57
SCAF11-204ENST00000395454 PRR27Q6MZM9 219 aa11.5□□□□□ -0.57
SCAF11-204ENST00000395454 PRNTQ86SH4 94 aa11.5□□□□□ -0.57
SCAF11-204ENST00000395454 HIST3H2BBQ8N257 126 aa11.5□□□□□ -0.57
SCAF11-204ENST00000395454 MRPL53Q96EL3 112 aaKnown RBP11.5□□□□□ -0.57
SCAF11-204ENST00000395454 UBE2E2Q96LR5 201 aa11.5□□□□□ -0.57
SCAF11-204ENST00000395454 NAT8BQ9UHF3 227 aa11.5□□□□□ -0.57
SCAF11-204ENST00000395454 TSSC4Q9Y5U2 329 aaPredicted RBP11.5□□□□□ -0.57
SCAF11-204ENST00000395454 CA1P00915 261 aaPredicted RBP11.5□□□□□ -0.57
SCAF11-204ENST00000395454 WDR73Q6P4I2 378 aa11.5□□□□□ -0.57
SCAF11-204ENST00000395454 C18orf65Q6ZTR6 163 aa11.5□□□□□ -0.57
SCAF11-204ENST00000395454 KLHL30-AS1Q8NEE0 82 aa11.5□□□□□ -0.57
SCAF11-204ENST00000395454 ZC2HC1AQ96GY0 325 aa11.5□□□□□ -0.57
SCAF11-204ENST00000395454 CITED1Q99966 193 aa11.5□□□□□ -0.57
SCAF11-204ENST00000395454 RBAKDNA6NC62 111 aa11.49□□□□□ -0.57
SCAF11-204ENST00000395454 CHEK1O14757 476 aa11.49□□□□□ -0.57
SCAF11-204ENST00000395454 P01737 135 aa11.49□□□□□ -0.57
SCAF11-204ENST00000395454 CBLN1P23435 193 aa11.49□□□□□ -0.57
SCAF11-204ENST00000395454 AKR1D1P51857 326 aa11.49□□□□□ -0.57
SCAF11-204ENST00000395454 UNQ9165/PRO28630Q6UXU0 137 aa11.49□□□□□ -0.57
SCAF11-204ENST00000395454 ATP5L2Q7Z4Y8 100 aa11.49□□□□□ -0.57
SCAF11-204ENST00000395454 NUP35Q8NFH5 326 aa11.49□□□□□ -0.57
SCAF11-204ENST00000395454 CLEC5AQ9NY25 188 aa11.49□□□□□ -0.57
SCAF11-204ENST00000395454 ANK2Q01484 3957 aa11.49□□□□□ -0.57
SCAF11-204ENST00000395454 A8MWL6 223 aa11.48□□□□□ -0.57
SCAF11-204ENST00000395454 NSUN5P1Q3KNT7 163 aa11.48□□□□□ -0.57
SCAF11-204ENST00000395454 TMEM136Q6ZRR5 245 aa11.48□□□□□ -0.57
SCAF11-204ENST00000395454 GBGT1Q8N5D6 347 aa11.48□□□□□ -0.57
SCAF11-204ENST00000395454 NEU1Q99519 415 aa11.48□□□□□ -0.57
SCAF11-204ENST00000395454 FRMD6-AS1P0C7T7 363 aa11.48□□□□□ -0.57
SCAF11-204ENST00000395454 FOXA3P55318 350 aaPredicted RBP11.48□□□□□ -0.57
SCAF11-204ENST00000395454 TCL1AP56279 114 aa11.48□□□□□ -0.57
SCAF11-204ENST00000395454 LCN12Q6JVE5 192 aa11.48□□□□□ -0.57
SCAF11-204ENST00000395454 ZNF747Q9BV97 191 aa11.48□□□□□ -0.57
SCAF11-204ENST00000395454 TRAV8-2A0A0B4J237 113 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 A0A1B0GXF2 115 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 HIGD1CA8MV81 97 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 SMIM6P0DI80 62 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 DEFB136Q30KP8 78 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 SAPCD1Q5SSQ6 148 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 C8orf86Q6ZUL3 223 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 MRPL18Q9H0U6 180 aaKnown RBP11.47□□□□□ -0.57
SCAF11-204ENST00000395454 PEF1Q9UBV8 284 aaKnown RBP11.47□□□□□ -0.57
SCAF11-204ENST00000395454 WNK1Q9H4A3 2382 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 XKRY2A2RUG3 117 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 SNURFLB1AK76 121 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 K7EMT4 169 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 HLA-DQA1P01909 254 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 LGALS1P09382 135 aaKnown RBP11.47□□□□□ -0.57
SCAF11-204ENST00000395454 GFI1BQ5VTD9 330 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 NDUFA11Q86Y39 141 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 GPHB5Q86YW7 130 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 C4orf3Q8WVX3 66 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 GTSF1Q8WW33 167 aa11.47□□□□□ -0.57
SCAF11-204ENST00000395454 IGKV2-40A0A087WW87 121 aaPredicted RBP11.46□□□□□ -0.58
SCAF11-204ENST00000395454 IGKV2D-40P01614 121 aaPredicted RBP11.46□□□□□ -0.58
SCAF11-204ENST00000395454 CRIP1P50238 77 aa11.46□□□□□ -0.58
SCAF11-204ENST00000395454 DAZAP1Q96EP5 407 aaKnown RBP11.46□□□□□ -0.58
SCAF11-204ENST00000395454 PRR25Q96S07 402 aa11.46□□□□□ -0.58
SCAF11-204ENST00000395454 IGHV3-66A0A0C4DH42 116 aa11.45□□□□□ -0.58
SCAF11-204ENST00000395454 A0A1W2PS18 150 aa11.45□□□□□ -0.58
SCAF11-204ENST00000395454 ZNF207O43670 478 aaKnown RBP11.45□□□□□ -0.58
SCAF11-204ENST00000395454 HLA-DMBP28068 263 aa11.45□□□□□ -0.58
SCAF11-204ENST00000395454 DUX3Q96PT4 197 aa11.45□□□□□ -0.58
SCAF11-204ENST00000395454 GPR61Q9BZJ8 451 aa11.45□□□□□ -0.58
SCAF11-204ENST00000395454 DAZ1Q9NQZ3 744 aaKnown RBP11.45□□□□□ -0.58
SCAF11-204ENST00000395454 PPP1R14DQ9NXH3 145 aa11.45□□□□□ -0.58
SCAF11-204ENST00000395454 VWFP04275 2813 aa11.45□□□□□ -0.58
SCAF11-204ENST00000395454 ADARB2-AS1A8MUL3 147 aa11.45□□□□□ -0.58
SCAF11-204ENST00000395454 SOCS3O14543 225 aa11.45□□□□□ -0.58
SCAF11-204ENST00000395454 SHISA2Q6UWI4 295 aa11.45□□□□□ -0.58
SCAF11-204ENST00000395454 RBPMS2Q6ZRY4 209 aaKnown RBP11.45□□□□□ -0.58
SCAF11-204ENST00000395454 OR11H1Q8NG94 326 aa11.45□□□□□ -0.58
SCAF11-204ENST00000395454 IGHV3OR16-13A0A075B7E8 117 aa11.44□□□□□ -0.58
SCAF11-204ENST00000395454 IGHV3-74A0A0B4J1X5 117 aa11.44□□□□□ -0.58
SCAF11-204ENST00000395454 IGHV7-4-1A0A0J9YVY3 117 aa11.44□□□□□ -0.58
SCAF11-204ENST00000395454 VGLL1Q99990 258 aa11.44□□□□□ -0.58
SCAF11-204ENST00000395454 IGHV3-49A0A0A0MS15 119 aa11.43□□□□□ -0.58
SCAF11-204ENST00000395454 ZNF705FA8MVS1 300 aaPredicted RBP11.43□□□□□ -0.58
SCAF11-204ENST00000395454 CT45A10P0DMU9 189 aa11.43□□□□□ -0.58
SCAF11-204ENST00000395454 IGFL4Q6B9Z1 124 aa11.43□□□□□ -0.58
SCAF11-204ENST00000395454 MRPL54Q6P161 138 aaKnown RBP11.43□□□□□ -0.58
SCAF11-204ENST00000395454 C8orf49Q96NF6 230 aa11.43□□□□□ -0.58
SCAF11-204ENST00000395454 HIST1H2BLQ99880 126 aa11.43□□□□□ -0.58
SCAF11-204ENST00000395454 IGHV4OR15-8A0A075B7B6 117 aa11.43□□□□□ -0.58
SCAF11-204ENST00000395454 A0A087WW49 117 aa11.43□□□□□ -0.58
SCAF11-204ENST00000395454 Q0VG73 95 aa11.43□□□□□ -0.58
SCAF11-204ENST00000395454 OR2D3Q8NGH3 330 aa11.43□□□□□ -0.58
SCAF11-204ENST00000395454 PRAC2D3DTV9 90 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 SPINK4O60575 86 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 ESDP10768 282 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 FAM106AQ4KMX7 169 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 FAM162BQ5T6X4 162 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 GDF5OSQ5U4N7 250 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 Q6AWC8 147 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 C9orf47Q6ZRZ4 202 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 TCF24Q7RTU0 167 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 RNF182Q8N6D2 247 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 OR1N2Q8NGR9 330 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms