RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 A0A087WX48 190 aa13.37□□□□□ -0.27
PTPA-207ENST00000393370 TCL1BO95988 128 aa13.37□□□□□ -0.27
PTPA-207ENST00000393370 TGFAP01135 160 aa13.37□□□□□ -0.27
PTPA-207ENST00000393370 LINC01559Q495D7 138 aa13.37□□□□□ -0.27
PTPA-207ENST00000393370 FAM216BQ8N7L0 139 aa13.37□□□□□ -0.27
PTPA-207ENST00000393370 TRAV4A0A0B4J268 109 aa13.37□□□□□ -0.27
PTPA-207ENST00000393370 GAGE2BQ13066 116 aa13.37□□□□□ -0.27
PTPA-207ENST00000393370 MRGPRG-AS1Q2M3A8 158 aa13.37□□□□□ -0.27
PTPA-207ENST00000393370 GAGE2EQ4V326 116 aa13.37□□□□□ -0.27
PTPA-207ENST00000393370 CCL13Q99616 98 aa13.37□□□□□ -0.27
PTPA-207ENST00000393370 CTSZQ9UBR2 303 aa13.37□□□□□ -0.27
PTPA-207ENST00000393370 GAGE2DQ9UEU5 116 aa13.37□□□□□ -0.27
PTPA-207ENST00000393370 A8MWV9 139 aa13.36□□□□□ -0.27
PTPA-207ENST00000393370 TMEM262E9PQX1 116 aa13.36□□□□□ -0.27
PTPA-207ENST00000393370 CRLF1O75462 422 aa13.36□□□□□ -0.27
PTPA-207ENST00000393370 LGALS1P09382 135 aaKnown RBP13.36□□□□□ -0.27
PTPA-207ENST00000393370 ZNF575Q86XF7 245 aa13.36□□□□□ -0.27
PTPA-207ENST00000393370 LINC00574Q9H8X3 128 aa13.36□□□□□ -0.27
PTPA-207ENST00000393370 CLEC3BP05452 202 aa13.36□□□□□ -0.27
PTPA-207ENST00000393370 MYOZ3Q8TDC0 251 aa13.36□□□□□ -0.27
PTPA-207ENST00000393370 SPRR3Q9UBC9 169 aa13.36□□□□□ -0.27
PTPA-207ENST00000393370 PRTN3P24158 256 aa13.35□□□□□ -0.27
PTPA-207ENST00000393370 UBE2D1P51668 147 aa13.35□□□□□ -0.27
PTPA-207ENST00000393370 PROCRQ9UNN8 238 aa13.35□□□□□ -0.27
PTPA-207ENST00000393370 AHCTF1Q8WYP5 2266 aa13.35□□□□□ -0.27
PTPA-207ENST00000393370 IGLV2-18A0A075B6J9 118 aa13.35□□□□□ -0.27
PTPA-207ENST00000393370 SPRY3O43610 288 aa13.35□□□□□ -0.27
PTPA-207ENST00000393370 IGLC6P0CF74 106 aa13.35□□□□□ -0.27
PTPA-207ENST00000393370 PVRIGQ6DKI7 326 aa13.35□□□□□ -0.27
PTPA-207ENST00000393370 SBSPONQ8IVN8 264 aa13.35□□□□□ -0.27
PTPA-207ENST00000393370 RAX2Q96IS3 184 aa13.35□□□□□ -0.27
PTPA-207ENST00000393370 GAFA1Q96PS6 74 aa13.35□□□□□ -0.27
PTPA-207ENST00000393370 SCNM1Q9BWG6 230 aa13.35□□□□□ -0.27
PTPA-207ENST00000393370 PLNP26678 52 aa13.34□□□□□ -0.27
PTPA-207ENST00000393370 EFNA4P52798 201 aa13.34□□□□□ -0.27
PTPA-207ENST00000393370 Q8N8P6 123 aa13.34□□□□□ -0.27
PTPA-207ENST00000393370 ZNF80P51504 273 aaPredicted RBP13.34□□□□□ -0.27
PTPA-207ENST00000393370 K7EM74 188 aa13.33□□□□□ -0.27
PTPA-207ENST00000393370 TMEM78Q5T7P6 136 aa13.33□□□□□ -0.27
PTPA-207ENST00000393370 Q6ZT83 130 aa13.33□□□□□ -0.27
PTPA-207ENST00000393370 IFITM1P13164 125 aa13.33□□□□□ -0.28
PTPA-207ENST00000393370 TTC32Q5I0X7 151 aa13.33□□□□□ -0.28
PTPA-207ENST00000393370 LYPD1Q8N2G4 141 aa13.33□□□□□ -0.28
PTPA-207ENST00000393370 SHANK2-AS3Q9BTD1 123 aa13.33□□□□□ -0.28
PTPA-207ENST00000393370 IGKV2-40A0A087WW87 121 aaPredicted RBP13.33□□□□□ -0.28
PTPA-207ENST00000393370 SNCGO76070 127 aa13.33□□□□□ -0.28
PTPA-207ENST00000393370 IGKV2D-40P01614 121 aaPredicted RBP13.33□□□□□ -0.28
PTPA-207ENST00000393370 C1orf210Q8IVY1 113 aa13.33□□□□□ -0.28
PTPA-207ENST00000393370 FAM159AQ6UWV7 190 aa13.32□□□□□ -0.28
PTPA-207ENST00000393370 RASL11BQ9BPW5 248 aa13.32□□□□□ -0.28
PTPA-207ENST00000393370 TECTAO75443 2155 aa13.32□□□□□ -0.28
PTPA-207ENST00000393370 IGHV1-18A0A0C4DH31 117 aa13.32□□□□□ -0.28
PTPA-207ENST00000393370 K7ESF4 209 aa13.32□□□□□ -0.28
PTPA-207ENST00000393370 CCL3L1P16619 93 aa13.32□□□□□ -0.28
PTPA-207ENST00000393370 CNEP1R1Q8N9A8 125 aa13.32□□□□□ -0.28
PTPA-207ENST00000393370 Q8TAT8 98 aa13.32□□□□□ -0.28
PTPA-207ENST00000393370 TM4SF5O14894 197 aa13.31□□□□□ -0.28
PTPA-207ENST00000393370 VMA21Q3ZAQ7 101 aa13.31□□□□□ -0.28
PTPA-207ENST00000393370 C6orf15Q6UXA7 325 aaPredicted RBP13.31□□□□□ -0.28
PTPA-207ENST00000393370 DTX2Q86UW9 622 aa13.31□□□□□ -0.28
PTPA-207ENST00000393370 PLEKHB2Q96CS7 222 aa13.31□□□□□ -0.28
PTPA-207ENST00000393370 IGHV3-72A0A0B4J1Y9 119 aa13.31□□□□□ -0.28
PTPA-207ENST00000393370 TRAV8-2A0A0B4J237 113 aa13.31□□□□□ -0.28
PTPA-207ENST00000393370 H3BRN7 92 aa13.31□□□□□ -0.28
PTPA-207ENST00000393370 IGKV1-17P01599 117 aa13.31□□□□□ -0.28
PTPA-207ENST00000393370 CD7P09564 240 aa13.31□□□□□ -0.28
PTPA-207ENST00000393370 SRSF9Q13242 221 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTPA-207ENST00000393370 SPRY4Q9C004 299 aa13.31□□□□□ -0.28
PTPA-207ENST00000393370 CADP27708 2225 aa13.31□□□□□ -0.28
PTPA-207ENST00000393370 RAI1Q7Z5J4 1906 aaPredicted RBP13.3□□□□□ -0.28
PTPA-207ENST00000393370 ICE1Q9Y2F5 2266 aa13.3□□□□□ -0.28
PTPA-207ENST00000393370 F8VRH5 84 aa13.3□□□□□ -0.28
PTPA-207ENST00000393370 MRPS12O15235 138 aaKnown RBP13.3□□□□□ -0.28
PTPA-207ENST00000393370 LAGE3Q14657 143 aa13.3□□□□□ -0.28
PTPA-207ENST00000393370 PRR25Q96S07 402 aa13.3□□□□□ -0.28
PTPA-207ENST00000393370 CENPVL3A0A0U1RRI6 287 aa13.3□□□□□ -0.28
PTPA-207ENST00000393370 RPL27AP46776 148 aaKnown RBP13.3□□□□□ -0.28
PTPA-207ENST00000393370 PIP4P1Q86T03 277 aa13.3□□□□□ -0.28
PTPA-207ENST00000393370 PPP1R27Q86WC6 154 aa13.3□□□□□ -0.28
PTPA-207ENST00000393370 RAXQ9Y2V3 346 aa13.3□□□□□ -0.28
PTPA-207ENST00000393370 H7C1H1 209 aa13.29□□□□□ -0.28
PTPA-207ENST00000393370 LYRM7Q5U5X0 104 aa13.29□□□□□ -0.28
PTPA-207ENST00000393370 SCGB1D4Q6XE38 83 aa13.29□□□□□ -0.28
PTPA-207ENST00000393370 Q6ZQT7 251 aa13.29□□□□□ -0.28
PTPA-207ENST00000393370 NDUFA11Q86Y39 141 aa13.29□□□□□ -0.28
PTPA-207ENST00000393370 OR11H6Q8NGC7 330 aa13.29□□□□□ -0.28
PTPA-207ENST00000393370 NTN3O00634 580 aaPredicted RBP13.29□□□□□ -0.28
PTPA-207ENST00000393370 ENSAO43768 121 aaKnown RBP13.29□□□□□ -0.28
PTPA-207ENST00000393370 CEACAM4O75871 244 aa13.29□□□□□ -0.28
PTPA-207ENST00000393370 ORM1P02763 201 aa13.29□□□□□ -0.28
PTPA-207ENST00000393370 ARL3P36405 182 aa13.29□□□□□ -0.28
PTPA-207ENST00000393370 TRGV5A0A0B4J1U4 118 aa13.28□□□□□ -0.28
PTPA-207ENST00000393370 ZNF815PA8K554 130 aa13.28□□□□□ -0.28
PTPA-207ENST00000393370 TMEM30BQ3MIR4 351 aa13.28□□□□□ -0.28
PTPA-207ENST00000393370 SMG1Q96Q15 3661 aaKnown RBP13.28□□□□□ -0.28
PTPA-207ENST00000393370 CNFNQ9BYD5 112 aa13.28□□□□□ -0.28
PTPA-207ENST00000393370 AAMDCQ9H7C9 122 aa13.28□□□□□ -0.28
PTPA-207ENST00000393370 TRAV26-2A0A0B4J265 109 aa13.28□□□□□ -0.28
PTPA-207ENST00000393370 IGLV1-44P01699 117 aa13.28□□□□□ -0.28
PTPA-207ENST00000393370 CNTFRP26992 372 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms