RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 C20orf78Q9BR46 151 aa12.87□□□□□ -0.35
PHTF1-205ENST00000393357 MRPL35Q9NZE8 188 aaKnown RBP12.87□□□□□ -0.35
PHTF1-205ENST00000393357 PTH2Q96A98 100 aa12.86□□□□□ -0.35
PHTF1-205ENST00000393357 SPAG8Q99932 426 aaPredicted RBP12.86□□□□□ -0.35
PHTF1-205ENST00000393357 ONECUT1Q9UBC0 465 aa12.86□□□□□ -0.35
PHTF1-205ENST00000393357 C16orf97H3BN30 126 aa12.86□□□□□ -0.35
PHTF1-205ENST00000393357 HIF1ANQ9NWT6 349 aa12.86□□□□□ -0.35
PHTF1-205ENST00000393357 TM4SF5O14894 197 aa12.85□□□□□ -0.35
PHTF1-205ENST00000393357 CKS1BP61024 79 aa12.85□□□□□ -0.35
PHTF1-205ENST00000393357 MAP1LC3AQ9H492 121 aa12.85□□□□□ -0.35
PHTF1-205ENST00000393357 IGKV3-7A0A075B6H7 116 aa12.85□□□□□ -0.35
PHTF1-205ENST00000393357 TRAV17A0A0B4J275 112 aa12.85□□□□□ -0.35
PHTF1-205ENST00000393357 H3BVH4 76 aa12.85□□□□□ -0.35
PHTF1-205ENST00000393357 IGKCP01834 107 aa12.85□□□□□ -0.35
PHTF1-205ENST00000393357 PRRG2O14669 202 aa12.84□□□□□ -0.35
PHTF1-205ENST00000393357 ATP5IP56385 69 aaPredicted RBP12.84□□□□□ -0.35
PHTF1-205ENST00000393357 BSPH1Q075Z2 132 aa12.84□□□□□ -0.35
PHTF1-205ENST00000393357 ANXA2RQ3ZCQ2 193 aa12.84□□□□□ -0.35
PHTF1-205ENST00000393357 C1orf162Q8NEQ5 155 aaPredicted RBP12.84□□□□□ -0.35
PHTF1-205ENST00000393357 C19orf67A6NJJ6 358 aa12.84□□□□□ -0.35
PHTF1-205ENST00000393357 GLMPQ8WWB7 406 aa12.84□□□□□ -0.35
PHTF1-205ENST00000393357 TRAV26-1A0A087WT03 109 aa12.84□□□□□ -0.35
PHTF1-205ENST00000393357 APOMO95445 188 aa12.84□□□□□ -0.35
PHTF1-205ENST00000393357 IGHV1-8P0DP01 117 aa12.84□□□□□ -0.35
PHTF1-205ENST00000393357 CCDC144NLQ6NUI1 221 aa12.84□□□□□ -0.35
PHTF1-205ENST00000393357 CD59P13987 128 aa12.83□□□□□ -0.36
PHTF1-205ENST00000393357 MRGPRG-AS1Q2M3A8 158 aa12.83□□□□□ -0.36
PHTF1-205ENST00000393357 ZNF562Q6V9R5 426 aa12.83□□□□□ -0.36
PHTF1-205ENST00000393357 PRSS47A8MTI9 375 aa12.83□□□□□ -0.36
PHTF1-205ENST00000393357 C17orf100A8MU93 164 aa12.83□□□□□ -0.36
PHTF1-205ENST00000393357 TNFRSF6BO95407 300 aa12.83□□□□□ -0.36
PHTF1-205ENST00000393357 TRGV3P03979 118 aa12.83□□□□□ -0.36
PHTF1-205ENST00000393357 K7EM74 188 aa12.83□□□□□ -0.36
PHTF1-205ENST00000393357 ZNF491Q8N8L2 437 aa12.83□□□□□ -0.36
PHTF1-205ENST00000393357 WI2-2373I1.2A0A1W2PRP0 233 aa12.82□□□□□ -0.36
PHTF1-205ENST00000393357 OVOL3O00110 214 aa12.82□□□□□ -0.36
PHTF1-205ENST00000393357 FTH1P19P0C7X4 201 aa12.82□□□□□ -0.36
PHTF1-205ENST00000393357 LOXP28300 417 aaPredicted RBP12.82□□□□□ -0.36
PHTF1-205ENST00000393357 H7C2G1 150 aa12.82□□□□□ -0.36
PHTF1-205ENST00000393357 KLRD1Q13241 179 aa12.82□□□□□ -0.36
PHTF1-205ENST00000393357 IGLV3-9A0A075B6K5 115 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 IGHV1-3A0A0C4DH29 117 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 MC5RP33032 325 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 ODF1Q14990 250 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 ADIPOQQ15848 244 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 CD300EQ496F6 205 aaPredicted RBP12.81□□□□□ -0.36
PHTF1-205ENST00000393357 IGLL5B9A064 214 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 PRAC2D3DTV9 90 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 TIMM23O14925 209 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 IGHG3P01860 377 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 SMIM17P0DL12 118 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 GAGE13Q4V321 117 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 SHANK2-AS3Q9BTD1 123 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 FAM215AQ9Y5M1 114 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 DOPEY2Q9Y3R5 2298 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 TEX22C9J3V5 150 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 PSMB2P49721 201 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 ZNF502Q8TBZ5 544 aa12.81□□□□□ -0.36
PHTF1-205ENST00000393357 C2CD3Q4AC94 2353 aa12.8□□□□□ -0.36
PHTF1-205ENST00000393357 OTOGLQ3ZCN5 2332 aa12.8□□□□□ -0.36
PHTF1-205ENST00000393357 LINC01548A6NM66 108 aa12.8□□□□□ -0.36
PHTF1-205ENST00000393357 CDX4O14627 284 aaPredicted RBP12.8□□□□□ -0.36
PHTF1-205ENST00000393357 CRYGCP07315 174 aa12.8□□□□□ -0.36
PHTF1-205ENST00000393357 C16orf54Q6UWD8 224 aa12.8□□□□□ -0.36
PHTF1-205ENST00000393357 SCGB1D4Q6XE38 83 aa12.8□□□□□ -0.36
PHTF1-205ENST00000393357 VKORC1Q9BQB6 163 aa12.8□□□□□ -0.36
PHTF1-205ENST00000393357 A0A1B0GV72 72 aa12.8□□□□□ -0.36
PHTF1-205ENST00000393357 J3QR89 54 aa12.8□□□□□ -0.36
PHTF1-205ENST00000393357 CEND1Q8N111 149 aa12.8□□□□□ -0.36
PHTF1-205ENST00000393357 TNFRSF14Q92956 283 aa12.8□□□□□ -0.36
PHTF1-205ENST00000393357 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
PHTF1-205ENST00000393357 DEFB1P60022 68 aa12.79□□□□□ -0.36
PHTF1-205ENST00000393357 SYT8Q8NBV8 401 aa12.79□□□□□ -0.36
PHTF1-205ENST00000393357 MRPL16Q9NX20 251 aaKnown RBP12.79□□□□□ -0.36
PHTF1-205ENST00000393357 HHLA3Q9XRX5 114 aa12.79□□□□□ -0.36
PHTF1-205ENST00000393357 TMEM178BH3BS89 294 aa12.79□□□□□ -0.36
PHTF1-205ENST00000393357 DPM2O94777 84 aa12.79□□□□□ -0.36
PHTF1-205ENST00000393357 C12orf74Q32Q52 190 aa12.79□□□□□ -0.36
PHTF1-205ENST00000393357 DEFB124Q8NES8 71 aa12.79□□□□□ -0.36
PHTF1-205ENST00000393357 PRR25Q96S07 402 aa12.79□□□□□ -0.36
PHTF1-205ENST00000393357 SPANXB1Q9NS25 103 aaPredicted RBP12.79□□□□□ -0.36
PHTF1-205ENST00000393357 CHTOPQ9Y3Y2 248 aaKnown RBP12.79□□□□□ -0.36
PHTF1-205ENST00000393357 I3L2K1 104 aa12.79□□□□□ -0.36
PHTF1-205ENST00000393357 K7EIM0 57 aa12.79□□□□□ -0.36
PHTF1-205ENST00000393357 ARL3P36405 182 aa12.79□□□□□ -0.36
PHTF1-205ENST00000393357 GFRALQ6UXV0 394 aa12.79□□□□□ -0.36
PHTF1-205ENST00000393357 SRSF9Q13242 221 aaKnown RBP eCLIP12.78□□□□□ -0.36
PHTF1-205ENST00000393357 IL17RELQ6ZVW7 336 aa12.78□□□□□ -0.36
PHTF1-205ENST00000393357 MYOZ3Q8TDC0 251 aa12.78□□□□□ -0.36
PHTF1-205ENST00000393357 TTC9CQ8N5M4 171 aa12.78□□□□□ -0.36
PHTF1-205ENST00000393357 PGPEP1Q9NXJ5 209 aa12.78□□□□□ -0.36
PHTF1-205ENST00000393357 GATA4P43694 442 aa12.77□□□□□ -0.36
PHTF1-205ENST00000393357 DTX2Q86UW9 622 aa12.77□□□□□ -0.36
PHTF1-205ENST00000393357 M0R381 172 aa12.77□□□□□ -0.37
PHTF1-205ENST00000393357 NDUFS8O00217 210 aa12.77□□□□□ -0.37
PHTF1-205ENST00000393357 HLA-DRB4P13762 266 aa12.77□□□□□ -0.37
PHTF1-205ENST00000393357 HLA-DRB4X5D2U9 266 aa12.77□□□□□ -0.37
PHTF1-205ENST00000393357 KLHL30-AS1Q8NEE0 82 aa12.77□□□□□ -0.37
PHTF1-205ENST00000393357 SPANXN1Q5VSR9 72 aa12.76□□□□□ -0.37
PHTF1-205ENST00000393357 FOXI2Q6ZQN5 318 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms