RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 DUX3Q96PT4 197 aa9.3□□□□□ -0.92
SPTBN1-203ENST00000389980 RNF24Q9Y225 148 aa9.3□□□□□ -0.92
SPTBN1-203ENST00000389980 TRAV8-1A0A0A6YYK1 113 aa9.3□□□□□ -0.92
SPTBN1-203ENST00000389980 TCRAP04437 139 aa9.3□□□□□ -0.92
SPTBN1-203ENST00000389980 GNG4P50150 75 aa9.3□□□□□ -0.92
SPTBN1-203ENST00000389980 FAM106AQ4KMX7 169 aa9.3□□□□□ -0.92
SPTBN1-203ENST00000389980 ZNF705AQ6ZN79 300 aaPredicted RBP9.3□□□□□ -0.92
SPTBN1-203ENST00000389980 TEX43Q6ZNM6 134 aa9.3□□□□□ -0.92
SPTBN1-203ENST00000389980 GOLT1AQ6ZVE7 132 aa9.3□□□□□ -0.92
SPTBN1-203ENST00000389980 CMTM2Q8TAZ6 248 aa9.3□□□□□ -0.92
SPTBN1-203ENST00000389980 IGF2BP2-AS1Q96M15 143 aa9.3□□□□□ -0.92
SPTBN1-203ENST00000389980 SYNJ2BPP57105 145 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 PDE6HQ13956 83 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 C16orf54Q6UWD8 224 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 GPHB5Q86YW7 130 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 OR10G8Q8NGN5 311 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 ASCL2Q99929 193 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 DAZ1Q9NQZ3 744 aaKnown RBP9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 C9JCJ5 164 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 IGLV2-8P01709 118 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 ESDP10768 282 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 HOXD3P31249 432 aaPredicted RBP9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 TMEM183BQ1AE95 376 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 DMRTA1Q5VZB9 504 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 RNF182Q8N6D2 247 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 WIPF2Q8TF74 440 aaPredicted RBP9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 GLMPQ8WWB7 406 aa9.29□□□□□ -0.92
SPTBN1-203ENST00000389980 IGHV7-4-1A0A0J9YVY3 117 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 A0A1W2PRX2 142 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 ZNF705FA8MVS1 300 aaPredicted RBP9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 CD28P10747 220 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 CDKN1BP46527 198 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 SLURP1P55000 103 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 LYPD1Q8N2G4 141 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 KLHL30-AS1Q8NEE0 82 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 OR2D3Q8NGH3 330 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 ORAOV1Q8WV07 137 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 GPR82Q96P67 336 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 RHPN1-AS1Q9BWJ2 59 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 C16orf95Q9H693 158 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 AAMDCQ9H7C9 122 aa9.28□□□□□ -0.92
SPTBN1-203ENST00000389980 IGKV3-7A0A075B6H7 116 aa9.27□□□□□ -0.92
SPTBN1-203ENST00000389980 A0A087X0K7 114 aa9.27□□□□□ -0.92
SPTBN1-203ENST00000389980 K7EP13 123 aa9.27□□□□□ -0.92
SPTBN1-203ENST00000389980 MGST1P10620 155 aaKnown RBP9.27□□□□□ -0.92
SPTBN1-203ENST00000389980 UBE2G1P62253 170 aa9.27□□□□□ -0.92
SPTBN1-203ENST00000389980 PSG9Q00887 426 aa9.27□□□□□ -0.92
SPTBN1-203ENST00000389980 OR11H1Q8NG94 326 aa9.27□□□□□ -0.92
SPTBN1-203ENST00000389980 RNASE7Q9H1E1 156 aaKnown RBP9.27□□□□□ -0.92
SPTBN1-203ENST00000389980 ZNF331Q9NQX6 463 aaPredicted RBP9.27□□□□□ -0.92
SPTBN1-203ENST00000389980 TMEM213A2RRL7 107 aa9.27□□□□□ -0.93
SPTBN1-203ENST00000389980 C8orf86Q6ZUL3 223 aa9.27□□□□□ -0.93
SPTBN1-203ENST00000389980 BAGE2Q86Y30 109 aa9.27□□□□□ -0.93
SPTBN1-203ENST00000389980 SORL1Q92673 2214 aa9.27□□□□□ -0.93
SPTBN1-203ENST00000389980 JMJD8Q96S16 334 aa9.27□□□□□ -0.93
SPTBN1-203ENST00000389980 SMPXQ9UHP9 88 aa9.27□□□□□ -0.93
SPTBN1-203ENST00000389980 KLF12Q9Y4X4 402 aa9.27□□□□□ -0.93
SPTBN1-203ENST00000389980 DIRC3C9JPN6 131 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 CHEK1O14757 476 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 IGLV2-11P01706 119 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 ZNF705DP0CH99 300 aaPredicted RBP9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 ZNF705BP0CI00 300 aaPredicted RBP9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 RPL11P62913 178 aaKnown RBP9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 FOXL1Q12952 345 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 C4orf3Q8WVX3 66 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 TENM1Q9UKZ4 2725 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 TRAV9-1A0A075B6T8 112 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 IGKV2-40A0A087WW87 121 aaPredicted RBP9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 TRAV8-2A0A0B4J237 113 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 A0A1W2PS18 150 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 C20orf202A1L168 122 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 TCF21O43680 179 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 CRLF1O75462 422 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 IGKV2D-40P01614 121 aaPredicted RBP9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 PRNTQ86SH4 94 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 CITED2Q99967 270 aaPredicted RBP9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 UFC1Q9Y3C8 167 aa9.26□□□□□ -0.93
SPTBN1-203ENST00000389980 K7EMT4 169 aa9.25□□□□□ -0.93
SPTBN1-203ENST00000389980 OR1N2Q8NGR9 330 aa9.25□□□□□ -0.93
SPTBN1-203ENST00000389980 GRAMD2BQ96HH9 432 aa9.25□□□□□ -0.93
SPTBN1-203ENST00000389980 FMC1Q96HJ9 113 aa9.25□□□□□ -0.93
SPTBN1-203ENST00000389980 RNF114Q9Y508 228 aa9.25□□□□□ -0.93
SPTBN1-203ENST00000389980 LY96Q9Y6Y9 160 aa9.25□□□□□ -0.93
SPTBN1-203ENST00000389980 PRAC2D3DTV9 90 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 LINC01619G3V211 115 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 SPINK4O60575 86 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 ZNF253O75346 499 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 RBX1P62877 108 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 KLF5Q13887 457 aaPredicted RBP9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 PRR27Q6MZM9 219 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 OR4B1Q8NGF8 309 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 LTAP01374 205 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 FRMD6-AS1P0C7T7 363 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 CSN1S1P47710 185 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 LCN12Q6JVE5 192 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 Q86TA4 180 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 DPF1Q92782 380 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 C16orf92Q96LL3 132 aa9.24□□□□□ -0.93
SPTBN1-203ENST00000389980 TRAPPC1Q9Y5R8 145 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms