RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 CSN1S1P47710 185 aa8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 OR11H2Q8NH07 326 aa8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 SGK494Q96LW2 274 aa8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 TMEM167BQ9NRX6 74 aa8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 HUWE1Q7Z6Z7 4374 aaKnown RBP8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 SLC25A5P05141 298 aaKnown RBP8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 LYPD1Q8N2G4 141 aa8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 CLRN3Q8NCR9 226 aa8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 Q8TAT8 98 aa8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 C1QTNF4Q9BXJ3 329 aa8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 AGPAT4-IT1Q9H0P7 198 aa8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 OTORQ9NRC9 128 aa8.54□□□□□ -1.04
DEPDC4-202ENST00000378244 GGTLC3B5MD39 225 aa8.53□□□□□ -1.04
DEPDC4-202ENST00000378244 PMS2P11Q13670 270 aa8.53□□□□□ -1.04
DEPDC4-202ENST00000378244 CSNK1G2-AS1Q8NCQ2 148 aa8.53□□□□□ -1.04
DEPDC4-202ENST00000378244 YTHDF2Q9Y5A9 579 aaKnown RBP8.53□□□□□ -1.04
DEPDC4-202ENST00000378244 TRAV8-1A0A0A6YYK1 113 aa8.53□□□□□ -1.04
DEPDC4-202ENST00000378244 CT45A10P0DMU9 189 aa8.53□□□□□ -1.04
DEPDC4-202ENST00000378244 GOLT1AQ6ZVE7 132 aa8.53□□□□□ -1.04
DEPDC4-202ENST00000378244 MRPL53Q96EL3 112 aaKnown RBP8.53□□□□□ -1.04
DEPDC4-202ENST00000378244 PRM2P04554 102 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 HTN1P15515 57 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 TMEM78Q5T7P6 136 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 CST9LP1Q5W188 147 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 TMEM208Q9BTX3 173 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 ZNF705EA8MWA4 302 aaPredicted RBP8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 DIRC3C9JPN6 131 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 NPIPB6E9PJ23 425 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 CRXO43186 299 aaPredicted RBP8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 IFNA7P01567 189 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 SULT1A2P50226 295 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 CCL20P78556 96 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 RXFP4Q8TDU9 374 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 MBD3L1Q8WWY6 194 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 TP53TG1Q9Y2A0 90 aa8.52□□□□□ -1.05
DEPDC4-202ENST00000378244 CDKN1BP46527 198 aa8.51□□□□□ -1.05
DEPDC4-202ENST00000378244 DPPA3Q6W0C5 159 aa8.51□□□□□ -1.05
DEPDC4-202ENST00000378244 A0A0J9YWU9 116 aa8.51□□□□□ -1.05
DEPDC4-202ENST00000378244 FAM74A7A6NL05 159 aa8.51□□□□□ -1.05
DEPDC4-202ENST00000378244 A8MTW9 85 aa8.51□□□□□ -1.05
DEPDC4-202ENST00000378244 PAGE4O60829 102 aa8.51□□□□□ -1.05
DEPDC4-202ENST00000378244 RAB5CP51148 216 aa8.51□□□□□ -1.05
DEPDC4-202ENST00000378244 C1orf158Q8N1D5 194 aa8.51□□□□□ -1.05
DEPDC4-202ENST00000378244 A0A1W2PRE2 83 aa8.5□□□□□ -1.05
DEPDC4-202ENST00000378244 RBMY1A1P0DJD3 496 aaKnown RBP8.5□□□□□ -1.05
DEPDC4-202ENST00000378244 RBMY1CP0DJD4 496 aa8.5□□□□□ -1.05
DEPDC4-202ENST00000378244 EMP1P54849 157 aa8.5□□□□□ -1.05
DEPDC4-202ENST00000378244 RBMY1FQ15415 496 aaKnown RBP8.5□□□□□ -1.05
DEPDC4-202ENST00000378244 C9orf47Q6ZRZ4 202 aa8.5□□□□□ -1.05
DEPDC4-202ENST00000378244 C5orf17Q8NAS9 161 aa8.5□□□□□ -1.05
DEPDC4-202ENST00000378244 IGF2BP2-AS1Q96M15 143 aa8.5□□□□□ -1.05
DEPDC4-202ENST00000378244 LINC00477Q96M19 166 aa8.5□□□□□ -1.05
DEPDC4-202ENST00000378244 LINC00479Q96M42 142 aa8.5□□□□□ -1.05
DEPDC4-202ENST00000378244 TRAV12-3A0A0B4J271 114 aa8.49□□□□□ -1.05
DEPDC4-202ENST00000378244 INSP01308 110 aa8.49□□□□□ -1.05
DEPDC4-202ENST00000378244 TCRAP04437 139 aa8.49□□□□□ -1.05
DEPDC4-202ENST00000378244 ATP5G3P48201 142 aa8.49□□□□□ -1.05
DEPDC4-202ENST00000378244 GNG13Q9P2W3 67 aa8.49□□□□□ -1.05
DEPDC4-202ENST00000378244 EPDR1Q9UM22 224 aa8.49□□□□□ -1.05
DEPDC4-202ENST00000378244 X6R8D5 127 aa8.49□□□□□ -1.05
DEPDC4-202ENST00000378244 GPX1P07203 203 aa8.49□□□□□ -1.05
DEPDC4-202ENST00000378244 ZNF138P52744 262 aa8.49□□□□□ -1.05
DEPDC4-202ENST00000378244 GFI1BQ5VTD9 330 aa8.49□□□□□ -1.05
DEPDC4-202ENST00000378244 ZNF492Q9P255 531 aa8.49□□□□□ -1.05
DEPDC4-202ENST00000378244 TRAV34A0A0B4J273 112 aa8.48□□□□□ -1.05
DEPDC4-202ENST00000378244 IGHV4-28A0A0C4DH34 117 aa8.48□□□□□ -1.05
DEPDC4-202ENST00000378244 TSPOP30536 169 aa8.48□□□□□ -1.05
DEPDC4-202ENST00000378244 RNASE4P34096 147 aaKnown RBP8.48□□□□□ -1.05
DEPDC4-202ENST00000378244 ZNF705AQ6ZN79 300 aaPredicted RBP8.48□□□□□ -1.05
DEPDC4-202ENST00000378244 Q6ZQT7 251 aa8.48□□□□□ -1.05
DEPDC4-202ENST00000378244 PCNPQ8WW12 178 aaKnown RBP8.48□□□□□ -1.05
DEPDC4-202ENST00000378244 LINC01587Q99440 93 aa8.48□□□□□ -1.05
DEPDC4-202ENST00000378244 GOLT1BQ9Y3E0 138 aa8.48□□□□□ -1.05
DEPDC4-202ENST00000378244 BTN1A1Q13410 526 aa8.48□□□□□ -1.05
DEPDC4-202ENST00000378244 EDA2RQ9HAV5 297 aa8.48□□□□□ -1.05
DEPDC4-202ENST00000378244 RBAKDNA6NC62 111 aa8.47□□□□□ -1.05
DEPDC4-202ENST00000378244 ZNF705GA8MUZ8 300 aaPredicted RBP8.47□□□□□ -1.05
DEPDC4-202ENST00000378244 TEX46H3BTG2 121 aa8.47□□□□□ -1.05
DEPDC4-202ENST00000378244 LEPP41159 167 aa8.47□□□□□ -1.05
DEPDC4-202ENST00000378244 PRR9Q5T870 116 aa8.47□□□□□ -1.05
DEPDC4-202ENST00000378244 K7EQM0 130 aa8.47□□□□□ -1.05
DEPDC4-202ENST00000378244 AMBPP02760 352 aa8.47□□□□□ -1.05
DEPDC4-202ENST00000378244 PRNTQ86SH4 94 aa8.47□□□□□ -1.05
DEPDC4-202ENST00000378244 ZFAND2AQ8N6M9 145 aa8.47□□□□□ -1.05
DEPDC4-202ENST00000378244 CYB561D1Q8N8Q1 229 aa8.47□□□□□ -1.05
DEPDC4-202ENST00000378244 Q8NAQ8 132 aa8.47□□□□□ -1.05
DEPDC4-202ENST00000378244 ATG101Q9BSB4 218 aa8.47□□□□□ -1.05
DEPDC4-202ENST00000378244 F6UZH7 168 aa8.46□□□□□ -1.05
DEPDC4-202ENST00000378244 TAGLN2P37802 199 aaKnown RBP8.46□□□□□ -1.05
DEPDC4-202ENST00000378244 TVP23CQ96ET8 276 aa8.46□□□□□ -1.05
DEPDC4-202ENST00000378244 WWC2-AS2Q96NR7 200 aa8.46□□□□□ -1.05
DEPDC4-202ENST00000378244 TRAV1-1A0A0B4J248 108 aa8.46□□□□□ -1.06
DEPDC4-202ENST00000378244 C11orf94C9JXX5 98 aa8.46□□□□□ -1.06
DEPDC4-202ENST00000378244 PEX7O00628 323 aa8.46□□□□□ -1.06
DEPDC4-202ENST00000378244 HBE1P02100 147 aa8.46□□□□□ -1.06
DEPDC4-202ENST00000378244 MIFP14174 115 aa8.46□□□□□ -1.06
DEPDC4-202ENST00000378244 AZU1P20160 251 aa8.46□□□□□ -1.06
DEPDC4-202ENST00000378244 RRN3P1Q2M238 152 aa8.46□□□□□ -1.06
DEPDC4-202ENST00000378244 FAM19A4Q96LR4 140 aa8.46□□□□□ -1.06
DEPDC4-202ENST00000378244 ODF3Q96PU9 254 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms