RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 GATA3P23771 443 aa13.64□□□□□ -0.23
MCF2L-203ENST00000375604 TRBV19A0A075B6N1 114 aa13.64□□□□□ -0.23
MCF2L-203ENST00000375604 C22orf46C9J442 243 aa13.63□□□□□ -0.23
MCF2L-203ENST00000375604 PLXNA2O75051 1894 aa13.63□□□□□ -0.23
MCF2L-203ENST00000375604 SLURP1P55000 103 aa13.63□□□□□ -0.23
MCF2L-203ENST00000375604 C2orf82Q6UX34 121 aa13.63□□□□□ -0.23
MCF2L-203ENST00000375604 Q6ZQT7 251 aa13.63□□□□□ -0.23
MCF2L-203ENST00000375604 NOP10Q9NPE3 64 aaKnown RBP13.63□□□□□ -0.23
MCF2L-203ENST00000375604 TRBV25-1A0A075B6N4 114 aa13.63□□□□□ -0.23
MCF2L-203ENST00000375604 OCIAD2Q56VL3 154 aa13.63□□□□□ -0.23
MCF2L-203ENST00000375604 Q6ZS49 121 aa13.63□□□□□ -0.23
MCF2L-203ENST00000375604 ANAPC13Q9BS18 74 aa13.63□□□□□ -0.23
MCF2L-203ENST00000375604 CACNA1DQ01668 2161 aa13.62□□□□□ -0.23
MCF2L-203ENST00000375604 IGHV1OR15-1A0A075B7D0 117 aa13.62□□□□□ -0.23
MCF2L-203ENST00000375604 CTSZQ9UBR2 303 aa13.62□□□□□ -0.23
MCF2L-203ENST00000375604 A0A1B0GW64 132 aa13.62□□□□□ -0.23
MCF2L-203ENST00000375604 GNRH2O43555 120 aa13.62□□□□□ -0.23
MCF2L-203ENST00000375604 GAGE2AQ6NT46 116 aa13.62□□□□□ -0.23
MCF2L-203ENST00000375604 LMO1P25800 156 aa13.62□□□□□ -0.23
MCF2L-203ENST00000375604 PIP4P1Q86T03 277 aa13.62□□□□□ -0.23
MCF2L-203ENST00000375604 IGHV4-30-2A0A087WSY4 118 aa13.62□□□□□ -0.23
MCF2L-203ENST00000375604 WIPF3A6NGB9 483 aa13.62□□□□□ -0.23
MCF2L-203ENST00000375604 F8WEM9 126 aa13.62□□□□□ -0.23
MCF2L-203ENST00000375604 SMPXQ9UHP9 88 aa13.62□□□□□ -0.23
MCF2L-203ENST00000375604 ESM1Q9NQ30 184 aa13.61□□□□□ -0.23
MCF2L-203ENST00000375604 MYMXA0A1B0GTQ4 84 aa13.61□□□□□ -0.23
MCF2L-203ENST00000375604 KIR3DS1Q14943 382 aa13.61□□□□□ -0.23
MCF2L-203ENST00000375604 SPINK8P0C7L1 97 aa13.61□□□□□ -0.23
MCF2L-203ENST00000375604 THAP8Q8NA92 274 aa13.61□□□□□ -0.23
MCF2L-203ENST00000375604 LY6G5BQ8NDX9 201 aa13.61□□□□□ -0.23
MCF2L-203ENST00000375604 ZC2HC1AQ96GY0 325 aa13.61□□□□□ -0.23
MCF2L-203ENST00000375604 COL6A6A6NMZ7 2263 aa13.61□□□□□ -0.23
MCF2L-203ENST00000375604 LYL1P12980 280 aa13.61□□□□□ -0.23
MCF2L-203ENST00000375604 I3L3M4 83 aa13.6□□□□□ -0.23
MCF2L-203ENST00000375604 IGLV1-44P01699 117 aa13.6□□□□□ -0.23
MCF2L-203ENST00000375604 NBL1P41271 181 aa13.6□□□□□ -0.23
MCF2L-203ENST00000375604 MRPL51Q4U2R6 128 aaKnown RBP13.6□□□□□ -0.23
MCF2L-203ENST00000375604 CHAC1Q9BUX1 264 aa13.6□□□□□ -0.23
MCF2L-203ENST00000375604 DOCK9Q9BZ29 2069 aa13.6□□□□□ -0.23
MCF2L-203ENST00000375604 H3BRN7 92 aa13.6□□□□□ -0.23
MCF2L-203ENST00000375604 CDKN1BP46527 198 aa13.6□□□□□ -0.23
MCF2L-203ENST00000375604 ANAPC1Q9H1A4 1944 aa13.59□□□□□ -0.23
MCF2L-203ENST00000375604 Q9HAA7 133 aa13.59□□□□□ -0.23
MCF2L-203ENST00000375604 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.59□□□□□ -0.23
MCF2L-203ENST00000375604 IGHV2-5P01817 119 aa13.59□□□□□ -0.23
MCF2L-203ENST00000375604 IGHV4-61A0A0C4DH41 118 aa13.58□□□□□ -0.23
MCF2L-203ENST00000375604 APOC4P55056 127 aa13.58□□□□□ -0.23
MCF2L-203ENST00000375604 NDUFA4O00483 81 aa13.58□□□□□ -0.24
MCF2L-203ENST00000375604 YPEL3P61236 119 aaPredicted RBP13.58□□□□□ -0.24
MCF2L-203ENST00000375604 SRSF8Q9BRL6 282 aaKnown RBP13.58□□□□□ -0.24
MCF2L-203ENST00000375604 HLA-DRB4P13762 266 aa13.58□□□□□ -0.24
MCF2L-203ENST00000375604 C1orf147Q96MC9 270 aaPredicted RBP13.58□□□□□ -0.24
MCF2L-203ENST00000375604 HLA-DRB4X5D2U9 266 aa13.58□□□□□ -0.24
MCF2L-203ENST00000375604 ANGP03950 147 aaKnown RBP13.58□□□□□ -0.24
MCF2L-203ENST00000375604 GAGE2EQ4V326 116 aa13.58□□□□□ -0.24
MCF2L-203ENST00000375604 GAGE2DQ9UEU5 116 aa13.58□□□□□ -0.24
MCF2L-203ENST00000375604 IGKV1OR2-108A0A075B7D4 117 aa13.57□□□□□ -0.24
MCF2L-203ENST00000375604 FOXE3Q13461 319 aa13.57□□□□□ -0.24
MCF2L-203ENST00000375604 IGHV7-4-1A0A0J9YVY3 117 aa13.57□□□□□ -0.24
MCF2L-203ENST00000375604 SLAQ13239 276 aa13.57□□□□□ -0.24
MCF2L-203ENST00000375604 PRSS46E5RG02 174 aa13.57□□□□□ -0.24
MCF2L-203ENST00000375604 C2orf66Q6UXQ4 117 aa13.57□□□□□ -0.24
MCF2L-203ENST00000375604 C9JAW5 83 aa13.57□□□□□ -0.24
MCF2L-203ENST00000375604 ANAPC10Q9UM13 185 aa13.57□□□□□ -0.24
MCF2L-203ENST00000375604 VWC2Q2TAL6 325 aa13.56□□□□□ -0.24
MCF2L-203ENST00000375604 TRAV25A0A0B4J276 109 aa13.56□□□□□ -0.24
MCF2L-203ENST00000375604 SDHAF1A6NFY7 115 aa13.56□□□□□ -0.24
MCF2L-203ENST00000375604 PDE6HQ13956 83 aa13.56□□□□□ -0.24
MCF2L-203ENST00000375604 NKAPP1Q8N9T2 125 aa13.56□□□□□ -0.24
MCF2L-203ENST00000375604 CCL24O00175 119 aa13.56□□□□□ -0.24
MCF2L-203ENST00000375604 INTS1Q8N201 2190 aaKnown RBP13.56□□□□□ -0.24
MCF2L-203ENST00000375604 LGALS1P09382 135 aaKnown RBP13.56□□□□□ -0.24
MCF2L-203ENST00000375604 WISP2O76076 250 aa13.55□□□□□ -0.24
MCF2L-203ENST00000375604 SEC11AP67812 179 aa13.55□□□□□ -0.24
MCF2L-203ENST00000375604 DEFB113Q30KQ7 82 aa13.55□□□□□ -0.24
MCF2L-203ENST00000375604 SPTA1P02549 2419 aa13.55□□□□□ -0.24
MCF2L-203ENST00000375604 PYY3Q5JQD4 70 aa13.55□□□□□ -0.24
MCF2L-203ENST00000375604 SUMO4Q6EEV6 95 aa13.55□□□□□ -0.24
MCF2L-203ENST00000375604 PRR25Q96S07 402 aa13.55□□□□□ -0.24
MCF2L-203ENST00000375604 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-203ENST00000375604 IGKV2-29A2NJV5 120 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-203ENST00000375604 GHRHP01286 108 aa13.55□□□□□ -0.24
MCF2L-203ENST00000375604 SIGMAR1Q99720 223 aa13.55□□□□□ -0.24
MCF2L-203ENST00000375604 XCL1P47992 114 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 DYNAPQ8N1N2 210 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 ZNF664Q8N3J9 261 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 CFHR4Q92496 578 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 TMEM243Q9BU79 118 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 GFRA4Q9GZZ7 299 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 LY96Q9Y6Y9 160 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 IGHV2-70P01814 119 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 C1orf194Q5T5A4 169 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 NOTCH4Q99466 2003 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 DOCK7Q96N67 2140 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 FAM104BQ5XKR9 115 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 IGHV4-4A0A075B6R2 117 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 PRSS29PA6NIE9 313 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 BLCAPP62952 87 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 SPTBN2O15020 2390 aa13.54□□□□□ -0.24
MCF2L-203ENST00000375604 IGKV2D-24A0A075B6R9 120 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms