RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 GREM1O60565 184 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 LINC01554Q52M75 96 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 SOSTDC1Q6X4U4 206 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 ZC3H3Q8IXZ2 948 aaKnown RBP4.85□□□□□ -1.63
SCN2A-202ENST00000375427 FAM60AQ9NP50 221 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 PPRC1Q5VV67 1664 aaKnown RBP4.85□□□□□ -1.63
SCN2A-202ENST00000375427 IGLC7A0M8Q6 106 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 RPL18AQ02543 176 aaKnown RBP4.85□□□□□ -1.63
SCN2A-202ENST00000375427 TFF3Q07654 80 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 LYZL1Q6UWQ5 148 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 MIR17HGQ75NE6 70 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 PNRC2Q9NPJ4 139 aaKnown RBP4.85□□□□□ -1.63
SCN2A-202ENST00000375427 DEPDC5O75140 1603 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 TM4SF5O14894 197 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 VSIG8P0DPA2 414 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 Q0VG73 95 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 VWC2Q2TAL6 325 aa4.85□□□□□ -1.63
SCN2A-202ENST00000375427 C20orf78Q9BR46 151 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 MDFIQ99750 246 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 MAST2Q6P0Q8 1798 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 IGLC6P0CF74 106 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 GTSF1Q8WW33 167 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 SLIT3O75094 1523 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 ATP1A1-AS1Q5TC04 95 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 Q6ZVQ6 151 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 PTPRBP23467 1997 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 PATJQ8NI35 1801 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 TRPM3Q9HCF6 1732 aaPredicted RBP4.84□□□□□ -1.63
SCN2A-202ENST00000375427 C2orf66Q6UXQ4 117 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 SDIM1Q6ZPB5 146 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 LIMD2Q9BT23 127 aa4.84□□□□□ -1.63
SCN2A-202ENST00000375427 TRBV10-3A0A0K0K1G6 114 aa4.84□□□□□ -1.64
SCN2A-202ENST00000375427 PLXNA1Q9UIW2 1896 aa4.84□□□□□ -1.64
SCN2A-202ENST00000375427 NCOR2Q9Y618 2525 aa4.84□□□□□ -1.64
SCN2A-202ENST00000375427 TRBV7-6A0A0J9YX20 115 aa4.84□□□□□ -1.64
SCN2A-202ENST00000375427 C16orf97H3BN30 126 aa4.84□□□□□ -1.64
SCN2A-202ENST00000375427 TRGV9Q99603 122 aa4.84□□□□□ -1.64
SCN2A-202ENST00000375427 ZNF106Q9H2Y7 1883 aaKnown RBP4.83□□□□□ -1.64
SCN2A-202ENST00000375427 COLCA2A8K830 154 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 ZNF708P17019 499 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 DAZ4Q86SG3 579 aaKnown RBP4.83□□□□□ -1.64
SCN2A-202ENST00000375427 CAMK2N2Q96S95 79 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 DAZ1Q9NQZ3 744 aaKnown RBP4.83□□□□□ -1.64
SCN2A-202ENST00000375427 RNF114Q9Y508 228 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 SH2D1AO60880 128 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 LINC00694P0DN24 101 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 FAM201AQ5SY85 155 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 CCL13Q99616 98 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 FMN2Q9NZ56 1722 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 PSPHP1O15172 72 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 C5orf56Q8N8D9 126 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 LINC00479Q96M42 142 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 HIVEP2P31629 2446 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 TRBV30A0A0K0K1B3 111 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 UNQ6494/PRO21346Q6UXR6 183 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 SLC22A18ASQ8N1D0 253 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 J3QW42 95 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 NDUFA4O00483 81 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 ATRAIDQ6UW56 229 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 C18orf32Q8TCD1 76 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 LINC00615Q96LM1 132 aaPredicted RBP4.83□□□□□ -1.64
SCN2A-202ENST00000375427 B9D2Q9BPU9 175 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 IGHV3-23P01764 117 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 COX7CP15954 63 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 EBI3Q14213 229 aa4.83□□□□□ -1.64
SCN2A-202ENST00000375427 CCL3L1P16619 93 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 LUZP6Q538Z0 58 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 PIK3CD-AS1Q5SR53 167 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 FAM166AQ6J272 317 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 FAM19A5Q7Z5A7 132 aaPredicted RBP4.82□□□□□ -1.64
SCN2A-202ENST00000375427 LYPD1Q8N2G4 141 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 SND1-IT1Q9HBX3 110 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 SPATA31D1Q6ZQQ2 1576 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 TMEM131Q92545 1883 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 ANGP03950 147 aaKnown RBP4.82□□□□□ -1.64
SCN2A-202ENST00000375427 A0A1W2PPC1 479 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 Q8N8P6 123 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 TIAM2Q8IVF5 1701 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 Q6ZQY7 126 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 RASL10BQ96S79 203 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 IGKV6-21A0A0C4DH24 114 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 CD27P26842 260 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 KIAA0040Q15053 153 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 C1orf220Q5T0J3 134 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 NUP98P52948 1817 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 CLTCQ00610 1675 aaKnown RBP4.82□□□□□ -1.64
SCN2A-202ENST00000375427 COX6B1P14854 86 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 TNS2Q63HR2 1409 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 DPTQ07507 201 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 PREX1Q8TCU6 1659 aa4.82□□□□□ -1.64
SCN2A-202ENST00000375427 NYNRINQ9P2P1 1898 aaKnown RBP4.82□□□□□ -1.64
SCN2A-202ENST00000375427 PKD1L2Q7Z442 2459 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 A0A0J9YWU9 116 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 DIRC1Q969H9 104 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 IGKV2D-26A0A0A0MRZ7 120 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 MRPL51Q4U2R6 128 aaKnown RBP4.81□□□□□ -1.64
SCN2A-202ENST00000375427 CCL19Q99731 98 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 AGPAT4-IT1Q9H0P7 198 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 IGKV1D-33P01593 117 aa4.81□□□□□ -1.64
SCN2A-202ENST00000375427 IGKV1-33P01594 117 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms