RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 A0A1B0GV90 55 aa12.3□□□□□ -0.44
CNKSR1-202ENST00000374253 EREGO14944 169 aa12.3□□□□□ -0.44
CNKSR1-202ENST00000374253 LINC00173Q6ZV60 143 aa12.3□□□□□ -0.44
CNKSR1-202ENST00000374253 METTL26Q96S19 204 aa12.3□□□□□ -0.44
CNKSR1-202ENST00000374253 MEGF9Q9H1U4 602 aa12.3□□□□□ -0.44
CNKSR1-202ENST00000374253 TEX15Q9BXT5 2789 aa12.29□□□□□ -0.44
CNKSR1-202ENST00000374253 FAM181BA6NEQ2 426 aa12.29□□□□□ -0.44
CNKSR1-202ENST00000374253 ZNF705AQ6ZN79 300 aaPredicted RBP12.29□□□□□ -0.44
CNKSR1-202ENST00000374253 ARL3P36405 182 aa12.29□□□□□ -0.44
CNKSR1-202ENST00000374253 IL17RELQ6ZVW7 336 aa12.29□□□□□ -0.44
CNKSR1-202ENST00000374253 PF4V1P10720 104 aa12.28□□□□□ -0.44
CNKSR1-202ENST00000374253 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
CNKSR1-202ENST00000374253 RIGQ13278 110 aa12.28□□□□□ -0.44
CNKSR1-202ENST00000374253 C19orf54Q5BKX5 351 aa12.28□□□□□ -0.44
CNKSR1-202ENST00000374253 IGKV3-7A0A075B6H7 116 aa12.28□□□□□ -0.44
CNKSR1-202ENST00000374253 ORM1P02763 201 aa12.28□□□□□ -0.44
CNKSR1-202ENST00000374253 Q6ZQT7 251 aa12.28□□□□□ -0.44
CNKSR1-202ENST00000374253 SPATA12Q7Z6I5 190 aa12.28□□□□□ -0.44
CNKSR1-202ENST00000374253 TRAV8-2A0A0B4J237 113 aa12.27□□□□□ -0.45
CNKSR1-202ENST00000374253 DEFB1P60022 68 aa12.27□□□□□ -0.45
CNKSR1-202ENST00000374253 SAPCD1Q5SSQ6 148 aa12.27□□□□□ -0.45
CNKSR1-202ENST00000374253 C8orf86Q6ZUL3 223 aa12.27□□□□□ -0.45
CNKSR1-202ENST00000374253 A6NDX4 124 aa12.27□□□□□ -0.45
CNKSR1-202ENST00000374253 SMAD7O15105 426 aaKnown RBP12.27□□□□□ -0.45
CNKSR1-202ENST00000374253 KLK9Q2XQG4 91 aa12.27□□□□□ -0.45
CNKSR1-202ENST00000374253 MCRIP2Q9BUT9 160 aaKnown RBP12.27□□□□□ -0.45
CNKSR1-202ENST00000374253 KLK9Q9UKQ9 250 aa12.27□□□□□ -0.45
CNKSR1-202ENST00000374253 CREBBPQ92793 2442 aa12.26□□□□□ -0.45
CNKSR1-202ENST00000374253 IGHV1-24A0A0C4DH33 117 aa12.26□□□□□ -0.45
CNKSR1-202ENST00000374253 B4DSR2 109 aa12.26□□□□□ -0.45
CNKSR1-202ENST00000374253 SRSF1Q07955 248 aaKnown RBP eCLIP12.26□□□□□ -0.45
CNKSR1-202ENST00000374253 AMN1Q8IY45 258 aa12.26□□□□□ -0.45
CNKSR1-202ENST00000374253 H0Y8G0 127 aa12.26□□□□□ -0.45
CNKSR1-202ENST00000374253 J3KRW8 73 aa12.26□□□□□ -0.45
CNKSR1-202ENST00000374253 MSRB1Q9NZV6 116 aa12.26□□□□□ -0.45
CNKSR1-202ENST00000374253 LINC00614P0C842 121 aa12.25□□□□□ -0.45
CNKSR1-202ENST00000374253 SPATA45Q537H7 98 aa12.25□□□□□ -0.45
CNKSR1-202ENST00000374253 ZNF575Q86XF7 245 aa12.25□□□□□ -0.45
CNKSR1-202ENST00000374253 NDFIP1Q9BT67 221 aa12.25□□□□□ -0.45
CNKSR1-202ENST00000374253 AGPAT4-IT1Q9H0P7 198 aa12.25□□□□□ -0.45
CNKSR1-202ENST00000374253 LOC389332A0A1B0GUA5 103 aa12.25□□□□□ -0.45
CNKSR1-202ENST00000374253 KRTAP10-9P60411 292 aa12.25□□□□□ -0.45
CNKSR1-202ENST00000374253 SNHG12Q9BXW3 62 aa12.25□□□□□ -0.45
CNKSR1-202ENST00000374253 A0A087X0K7 114 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 C2orf70A6NJV1 201 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 FAM223BA6NKX1 122 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 SMKR1H3BMG3 65 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 IGHV4-59P01825 116 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 IGHG2P01859 326 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 TWIST1Q15672 202 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 FAM223AQ8IWN6 122 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 D6R8Y8 96 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 IGF1P05019 195 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 EDN2P20800 178 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 S100A7P31151 101 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 RPL11P62913 178 aaKnown RBP12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 C10orf99Q6UWK7 81 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 C16orf92Q96LL3 132 aa12.24□□□□□ -0.45
CNKSR1-202ENST00000374253 TGFAP01135 160 aa12.23□□□□□ -0.45
CNKSR1-202ENST00000374253 RAB9AP51151 201 aa12.23□□□□□ -0.45
CNKSR1-202ENST00000374253 FXYD7P58549 80 aa12.23□□□□□ -0.45
CNKSR1-202ENST00000374253 FAM106AQ4KMX7 169 aa12.23□□□□□ -0.45
CNKSR1-202ENST00000374253 LINC00469Q8N7U9 141 aa12.23□□□□□ -0.45
CNKSR1-202ENST00000374253 DEFB112Q30KQ8 113 aa12.22□□□□□ -0.45
CNKSR1-202ENST00000374253 FER1L6-AS1Q8NA97 138 aa12.22□□□□□ -0.45
CNKSR1-202ENST00000374253 OR4X2Q8NGF9 303 aa12.22□□□□□ -0.45
CNKSR1-202ENST00000374253 C20orf173Q96LM9 149 aa12.22□□□□□ -0.45
CNKSR1-202ENST00000374253 C20orf144Q9BQM9 153 aa12.22□□□□□ -0.45
CNKSR1-202ENST00000374253 SLC50A1Q9BRV3 221 aa12.22□□□□□ -0.45
CNKSR1-202ENST00000374253 NCR2O95944 276 aa12.22□□□□□ -0.45
CNKSR1-202ENST00000374253 COX6B1P14854 86 aa12.22□□□□□ -0.45
CNKSR1-202ENST00000374253 BTF3P20290 206 aaKnown RBP12.22□□□□□ -0.45
CNKSR1-202ENST00000374253 C11orf21Q9P2W6 132 aa12.22□□□□□ -0.45
CNKSR1-202ENST00000374253 APCP25054 2843 aa12.22□□□□□ -0.45
CNKSR1-202ENST00000374253 MYO9AB2RTY4 2548 aa12.22□□□□□ -0.45
CNKSR1-202ENST00000374253 SRD5A1P18405 259 aa12.21□□□□□ -0.45
CNKSR1-202ENST00000374253 BMI1P35226 326 aa12.21□□□□□ -0.45
CNKSR1-202ENST00000374253 ZNF843Q8N446 348 aa12.21□□□□□ -0.45
CNKSR1-202ENST00000374253 TMEM190Q8WZ59 177 aa12.21□□□□□ -0.45
CNKSR1-202ENST00000374253 U3KQE9 123 aa12.21□□□□□ -0.45
CNKSR1-202ENST00000374253 SONP18583 2426 aaKnown RBP12.21□□□□□ -0.45
CNKSR1-202ENST00000374253 CCDC168Q8NDH2 2452 aa12.21□□□□□ -0.45
CNKSR1-202ENST00000374253 RNF223E7ERA6 249 aa12.21□□□□□ -0.45
CNKSR1-202ENST00000374253 LEPROTL1O95214 131 aa12.21□□□□□ -0.45
CNKSR1-202ENST00000374253 CRIP2P52943 208 aaPredicted RBP12.21□□□□□ -0.45
CNKSR1-202ENST00000374253 Q6AWC8 147 aa12.21□□□□□ -0.45
CNKSR1-202ENST00000374253 MIEN1Q9BRT3 115 aa12.21□□□□□ -0.45
CNKSR1-202ENST00000374253 FABP5P3A8MUU1 101 aa12.2□□□□□ -0.46
CNKSR1-202ENST00000374253 IFI27P40305 119 aaPredicted RBP12.2□□□□□ -0.46
CNKSR1-202ENST00000374253 LOXL1Q08397 574 aaPredicted RBP12.2□□□□□ -0.46
CNKSR1-202ENST00000374253 FOXE3Q13461 319 aa12.2□□□□□ -0.46
CNKSR1-202ENST00000374253 BATFQ16520 125 aa12.2□□□□□ -0.46
CNKSR1-202ENST00000374253 TM4SF20Q53R12 229 aa12.2□□□□□ -0.46
CNKSR1-202ENST00000374253 PMCHL2Q9BQD1 86 aa12.2□□□□□ -0.46
CNKSR1-202ENST00000374253 TP73-AS1Q9UF72 201 aa12.2□□□□□ -0.46
CNKSR1-202ENST00000374253 CTRLP40313 264 aa12.2□□□□□ -0.46
CNKSR1-202ENST00000374253 TMEM78Q5T7P6 136 aa12.2□□□□□ -0.46
CNKSR1-202ENST00000374253 COX8CQ7Z4L0 72 aa12.2□□□□□ -0.46
CNKSR1-202ENST00000374253 GLMPQ8WWB7 406 aa12.2□□□□□ -0.46
CNKSR1-202ENST00000374253 GAS8-AS1O95177 125 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms