RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 C4orf46Q504U0 113 aa10.32□□□□□ -0.76
TRAPPC3-203ENST00000373163 SCGB3A2Q96PL1 93 aa10.32□□□□□ -0.76
TRAPPC3-203ENST00000373163 H3BQ15 152 aa10.31□□□□□ -0.76
TRAPPC3-203ENST00000373163 IGHV3-30P01768 117 aa10.31□□□□□ -0.76
TRAPPC3-203ENST00000373163 IGHV3-33P01772 117 aa10.31□□□□□ -0.76
TRAPPC3-203ENST00000373163 IGHV3-30-3P0DP02 117 aa10.31□□□□□ -0.76
TRAPPC3-203ENST00000373163 IGHV3-30-5P0DP03 117 aa10.31□□□□□ -0.76
TRAPPC3-203ENST00000373163 PXDC1Q5TGL8 231 aa10.31□□□□□ -0.76
TRAPPC3-203ENST00000373163 SH2D6Q7Z4S9 175 aa10.31□□□□□ -0.76
TRAPPC3-203ENST00000373163 CLVS1Q8IUQ0 354 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC3-203ENST00000373163 OR10G4Q8NGN3 311 aa10.31□□□□□ -0.76
TRAPPC3-203ENST00000373163 FAM19A4Q96LR4 140 aa10.31□□□□□ -0.76
TRAPPC3-203ENST00000373163 IGHV1OR15-1A0A075B7D0 117 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 TRAV8-6A0A0B4J262 113 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 LOC100131303A0A0U1RQF7 123 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 K7EPK0 472 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 GPX1P07203 203 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 VBP1P61758 197 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 RRAS2P62070 204 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 SLC38A11Q08AI6 406 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 LAGE3Q14657 143 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 ZNF846Q147U1 533 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 OPCMLQ14982 345 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 NHLRC2Q8NBF2 726 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 OR10P1Q8NGE3 313 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 DAZAP1Q96EP5 407 aaKnown RBP10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
TRAPPC3-203ENST00000373163 CCNKO75909 580 aa10.29□□□□□ -0.76
TRAPPC3-203ENST00000373163 MRPS10P82664 201 aaKnown RBP10.29□□□□□ -0.76
TRAPPC3-203ENST00000373163 GUK1Q16774 197 aa10.29□□□□□ -0.76
TRAPPC3-203ENST00000373163 OR10J3Q5JRS4 329 aa10.29□□□□□ -0.76
TRAPPC3-203ENST00000373163 TMEM37Q8WXS4 190 aa10.29□□□□□ -0.76
TRAPPC3-203ENST00000373163 AP3S1Q92572 193 aa10.29□□□□□ -0.76
TRAPPC3-203ENST00000373163 LINC00477Q96M19 166 aa10.29□□□□□ -0.76
TRAPPC3-203ENST00000373163 SCP2D1Q9UJQ7 156 aa10.29□□□□□ -0.76
TRAPPC3-203ENST00000373163 RBFOX3A6NFN3 312 aa10.28□□□□□ -0.76
TRAPPC3-203ENST00000373163 M0R3E3 92 aa10.28□□□□□ -0.76
TRAPPC3-203ENST00000373163 COX7A2P2O60397 106 aa10.28□□□□□ -0.76
TRAPPC3-203ENST00000373163 CRISP2P16562 243 aa10.28□□□□□ -0.76
TRAPPC3-203ENST00000373163 CNPY1Q3B7I2 92 aa10.28□□□□□ -0.76
TRAPPC3-203ENST00000373163 Q6ZQT7 251 aa10.28□□□□□ -0.76
TRAPPC3-203ENST00000373163 ZNF546Q86UE3 836 aa10.28□□□□□ -0.76
TRAPPC3-203ENST00000373163 MRPL53Q96EL3 112 aaKnown RBP10.28□□□□□ -0.76
TRAPPC3-203ENST00000373163 AGPAT4-IT1Q9H0P7 198 aa10.28□□□□□ -0.76
TRAPPC3-203ENST00000373163 NPVFQ9HCQ7 196 aa10.28□□□□□ -0.76
TRAPPC3-203ENST00000373163 GOSR2O14653 212 aa10.27□□□□□ -0.77
TRAPPC3-203ENST00000373163 PRR9Q5T870 116 aa10.27□□□□□ -0.77
TRAPPC3-203ENST00000373163 C9orf47Q6ZRZ4 202 aa10.27□□□□□ -0.77
TRAPPC3-203ENST00000373163 SMIM4Q8WVI0 70 aa10.27□□□□□ -0.77
TRAPPC3-203ENST00000373163 RABL2BQ9UNT1 228 aa10.27□□□□□ -0.77
TRAPPC3-203ENST00000373163 IGLV2-11P01706 119 aa10.26□□□□□ -0.77
TRAPPC3-203ENST00000373163 NMBP08949 121 aa10.26□□□□□ -0.77
TRAPPC3-203ENST00000373163 C10orf113Q5VZT2 155 aa10.26□□□□□ -0.77
TRAPPC3-203ENST00000373163 ZFAND2AQ8N6M9 145 aa10.26□□□□□ -0.77
TRAPPC3-203ENST00000373163 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
TRAPPC3-203ENST00000373163 RASL10AQ92737 203 aa10.26□□□□□ -0.77
TRAPPC3-203ENST00000373163 PSENENQ9NZ42 101 aa10.26□□□□□ -0.77
TRAPPC3-203ENST00000373163 PKHD1L1Q86WI1 4243 aa10.25□□□□□ -0.77
TRAPPC3-203ENST00000373163 ZNF253O75346 499 aa10.25□□□□□ -0.77
TRAPPC3-203ENST00000373163 FUNDC2Q9BWH2 189 aa10.25□□□□□ -0.77
TRAPPC3-203ENST00000373163 MRPS26Q9BYN8 205 aaKnown RBP10.25□□□□□ -0.77
TRAPPC3-203ENST00000373163 SRRQ9GZT4 340 aa10.25□□□□□ -0.77
TRAPPC3-203ENST00000373163 MCUBQ9NWR8 336 aa10.25□□□□□ -0.77
TRAPPC3-203ENST00000373163 CCDC59Q9P031 241 aaKnown RBP10.25□□□□□ -0.77
TRAPPC3-203ENST00000373163 MGAT4CQ9UBM8 478 aa10.25□□□□□ -0.77
TRAPPC3-203ENST00000373163 TRAV8-3A0A0A6YYJ7 113 aa10.24□□□□□ -0.77
TRAPPC3-203ENST00000373163 TRAV4A0A0B4J268 109 aa10.24□□□□□ -0.77
TRAPPC3-203ENST00000373163 FNDC10F2Z333 226 aa10.24□□□□□ -0.77
TRAPPC3-203ENST00000373163 AGPAT2O15120 278 aa10.24□□□□□ -0.77
TRAPPC3-203ENST00000373163 VAMP1P23763 118 aa10.24□□□□□ -0.77
TRAPPC3-203ENST00000373163 OR4C5Q8NGB2 326 aa10.24□□□□□ -0.77
TRAPPC3-203ENST00000373163 ANKRD20A5PA0PJZ0 165 aa10.23□□□□□ -0.77
TRAPPC3-203ENST00000373163 PFN1P07737 140 aaKnown RBP10.23□□□□□ -0.77
TRAPPC3-203ENST00000373163 POLR2GP62487 172 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRAPPC3-203ENST00000373163 TMEM128Q5BJH2 165 aa10.23□□□□□ -0.77
TRAPPC3-203ENST00000373163 MUC21Q5SSG8 566 aa10.23□□□□□ -0.77
TRAPPC3-203ENST00000373163 LELP1Q5T871 98 aa10.23□□□□□ -0.77
TRAPPC3-203ENST00000373163 Q8N976 141 aa10.23□□□□□ -0.77
TRAPPC3-203ENST00000373163 SPXQ9BT56 116 aa10.23□□□□□ -0.77
TRAPPC3-203ENST00000373163 MIXL1Q9H2W2 232 aa10.23□□□□□ -0.77
TRAPPC3-203ENST00000373163 TRBV19A0A075B6N1 114 aa10.22□□□□□ -0.77
TRAPPC3-203ENST00000373163 HOXB5P09067 269 aa10.22□□□□□ -0.77
TRAPPC3-203ENST00000373163 METTL15P1P0C7V9 234 aa10.22□□□□□ -0.77
TRAPPC3-203ENST00000373163 TMEM78Q5T7P6 136 aa10.22□□□□□ -0.77
TRAPPC3-203ENST00000373163 Q6ZRU5 148 aa10.22□□□□□ -0.77
TRAPPC3-203ENST00000373163 Q8N3U1 123 aa10.22□□□□□ -0.77
TRAPPC3-203ENST00000373163 PRELID1Q9Y255 219 aa10.22□□□□□ -0.77
TRAPPC3-203ENST00000373163 IGKV2-40A0A087WW87 121 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC3-203ENST00000373163 IGHV3-16A0A0C4DH30 117 aa10.21□□□□□ -0.77
TRAPPC3-203ENST00000373163 FABP12A6NFH5 140 aa10.21□□□□□ -0.77
TRAPPC3-203ENST00000373163 CTDSPLO15194 276 aa10.21□□□□□ -0.77
TRAPPC3-203ENST00000373163 RGS5O15539 181 aa10.21□□□□□ -0.77
TRAPPC3-203ENST00000373163 SSSCA1O60232 199 aa10.21□□□□□ -0.77
TRAPPC3-203ENST00000373163 IGKV2D-40P01614 121 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC3-203ENST00000373163 ID3Q02535 119 aa10.21□□□□□ -0.77
TRAPPC3-203ENST00000373163 ATP6V0E2Q8NHE4 81 aa10.21□□□□□ -0.77
TRAPPC3-203ENST00000373163 RAB2BQ8WUD1 216 aa10.21□□□□□ -0.77
TRAPPC3-203ENST00000373163 RNF222A6NCQ9 220 aa10.2□□□□□ -0.78
TRAPPC3-203ENST00000373163 HIST1H1EP10412 219 aaKnown RBP10.2□□□□□ -0.78
TRAPPC3-203ENST00000373163 GATA1P15976 413 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms