RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ZNF575Q86XF7 245 aa14.4□□□□□ -0.1
USP49-202ENST00000373010 SLC50A1Q9BRV3 221 aa14.4□□□□□ -0.1
USP49-202ENST00000373010 U3KQE9 123 aa14.4□□□□□ -0.1
USP49-202ENST00000373010 MYO18BQ8IUG5 2567 aa14.39□□□□□ -0.11
USP49-202ENST00000373010 AVPP01185 164 aa14.39□□□□□ -0.11
USP49-202ENST00000373010 BMI1P35226 326 aa14.39□□□□□ -0.11
USP49-202ENST00000373010 ZNF493Q6ZR52 646 aa14.39□□□□□ -0.11
USP49-202ENST00000373010 A6NDX4 124 aa14.39□□□□□ -0.11
USP49-202ENST00000373010 PRB1P04280 392 aa14.39□□□□□ -0.11
USP49-202ENST00000373010 ARL3P36405 182 aa14.39□□□□□ -0.11
USP49-202ENST00000373010 Q6ZS46 218 aa14.39□□□□□ -0.11
USP49-202ENST00000373010 IL17RELQ6ZVW7 336 aa14.39□□□□□ -0.11
USP49-202ENST00000373010 LINC00469Q8N7U9 141 aa14.39□□□□□ -0.11
USP49-202ENST00000373010 HIF1ANQ9NWT6 349 aa14.39□□□□□ -0.11
USP49-202ENST00000373010 ORM1P02763 201 aa14.38□□□□□ -0.11
USP49-202ENST00000373010 BLCAPP62952 87 aa14.38□□□□□ -0.11
USP49-202ENST00000373010 C8orf86Q6ZUL3 223 aa14.38□□□□□ -0.11
USP49-202ENST00000373010 AMN1Q8IY45 258 aa14.38□□□□□ -0.11
USP49-202ENST00000373010 TMEM70Q9BUB7 260 aa14.38□□□□□ -0.11
USP49-202ENST00000373010 IGF1P05019 195 aa14.37□□□□□ -0.11
USP49-202ENST00000373010 FER1L6-AS1Q8NA97 138 aa14.37□□□□□ -0.11
USP49-202ENST00000373010 LEPROTL1O95214 131 aa14.37□□□□□ -0.11
USP49-202ENST00000373010 AGPAT4-IT1Q9H0P7 198 aa14.37□□□□□ -0.11
USP49-202ENST00000373010 IGHV3-11P01762 117 aa14.36□□□□□ -0.11
USP49-202ENST00000373010 RPS20P60866 119 aaKnown RBP14.36□□□□□ -0.11
USP49-202ENST00000373010 UNQ9165/PRO28630Q6UXU0 137 aa14.36□□□□□ -0.11
USP49-202ENST00000373010 TIMM8BQ9Y5J9 83 aaPredicted RBP14.36□□□□□ -0.11
USP49-202ENST00000373010 RBAKDNA6NC62 111 aa14.36□□□□□ -0.11
USP49-202ENST00000373010 FABP5P3A8MUU1 101 aa14.36□□□□□ -0.11
USP49-202ENST00000373010 D6R8Y8 96 aa14.36□□□□□ -0.11
USP49-202ENST00000373010 IGHG2P01859 326 aa14.36□□□□□ -0.11
USP49-202ENST00000373010 IGLC6P0CF74 106 aa14.36□□□□□ -0.11
USP49-202ENST00000373010 IGLC3P0DOY3 106 aa14.36□□□□□ -0.11
USP49-202ENST00000373010 PPIFP30405 207 aaKnown RBP14.36□□□□□ -0.11
USP49-202ENST00000373010 FAM104BQ5XKR9 115 aa14.36□□□□□ -0.11
USP49-202ENST00000373010 LCNL1Q6ZST4 164 aa14.36□□□□□ -0.11
USP49-202ENST00000373010 SPOCK3Q9BQ16 436 aa14.36□□□□□ -0.11
USP49-202ENST00000373010 KLK15Q9H2R5 256 aa14.36□□□□□ -0.11
USP49-202ENST00000373010 PSMG3-AS1Q96PY0 264 aa14.35□□□□□ -0.11
USP49-202ENST00000373010 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.35□□□□□ -0.112e-7■■■■■ 27.8
USP49-202ENST00000373010 TWIST1Q15672 202 aa14.35□□□□□ -0.11
USP49-202ENST00000373010 ATP6V0BQ99437 205 aa14.35□□□□□ -0.11
USP49-202ENST00000373010 ZFYVE26Q68DK2 2539 aa14.35□□□□□ -0.11
USP49-202ENST00000373010 B4DSR2 109 aa14.34□□□□□ -0.11
USP49-202ENST00000373010 SYS1-DBNDD2H3BUS1 97 aa14.34□□□□□ -0.11
USP49-202ENST00000373010 SMAD7O15105 426 aaKnown RBP14.34□□□□□ -0.11
USP49-202ENST00000373010 PF4V1P10720 104 aa14.34□□□□□ -0.11
USP49-202ENST00000373010 PRSS3P2Q8NHM4 247 aa14.34□□□□□ -0.11
USP49-202ENST00000373010 GLMPQ8WWB7 406 aa14.34□□□□□ -0.11
USP49-202ENST00000373010 MSRB1Q9NZV6 116 aa14.34□□□□□ -0.11
USP49-202ENST00000373010 USP24Q9UPU5 2620 aa14.33□□□□□ -0.11
USP49-202ENST00000373010 TRAV9-2A0A087WT02 112 aa14.33□□□□□ -0.12
USP49-202ENST00000373010 LOC389332A0A1B0GUA5 103 aa14.33□□□□□ -0.12
USP49-202ENST00000373010 NUTF2P61970 127 aaKnown RBP14.33□□□□□ -0.12
USP49-202ENST00000373010 FAM106AQ4KMX7 169 aa14.33□□□□□ -0.12
USP49-202ENST00000373010 MRPL51Q4U2R6 128 aaKnown RBP14.33□□□□□ -0.12
USP49-202ENST00000373010 UQCR10Q9UDW1 63 aa14.33□□□□□ -0.12
USP49-202ENST00000373010 IFI27P40305 119 aaPredicted RBP14.33□□□□□ -0.12
USP49-202ENST00000373010 C16orf92Q96LL3 132 aa14.33□□□□□ -0.12
USP49-202ENST00000373010 PRELID3AQ96N28 172 aa14.33□□□□□ -0.12
USP49-202ENST00000373010 AP5S1Q9NUS5 200 aa14.33□□□□□ -0.12
USP49-202ENST00000373010 U3KQK5 164 aa14.33□□□□□ -0.12
USP49-202ENST00000373010 CSPG4Q6UVK1 2322 aa14.32□□□□□ -0.12
USP49-202ENST00000373010 SMKR1H3BMG3 65 aa14.32□□□□□ -0.12
USP49-202ENST00000373010 SRSF2Q01130 221 aaKnown RBP14.32□□□□□ -0.12
USP49-202ENST00000373010 FA2HQ7L5A8 372 aa14.32□□□□□ -0.12
USP49-202ENST00000373010 MCRIP2Q9BUT9 160 aaKnown RBP14.32□□□□□ -0.12
USP49-202ENST00000373010 C11orf21Q9P2W6 132 aa14.32□□□□□ -0.12
USP49-202ENST00000373010 CRXO43186 299 aaPredicted RBP14.32□□□□□ -0.12
USP49-202ENST00000373010 OR5AL1P0C617 328 aa14.32□□□□□ -0.12
USP49-202ENST00000373010 TMEM78Q5T7P6 136 aa14.32□□□□□ -0.12
USP49-202ENST00000373010 C20orf173Q96LM9 149 aa14.32□□□□□ -0.12
USP49-202ENST00000373010 OR4C46A6NHA9 309 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 IGLL1P15814 213 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 BATFQ16520 125 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 LINC01559Q495D7 138 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 H0Y8G0 127 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 M0QZK8 103 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 NDUFA4O00483 81 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 LOXL1Q08397 574 aaPredicted RBP14.31□□□□□ -0.12
USP49-202ENST00000373010 Q6ZN92 141 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 Q6ZQT7 251 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 ORMDL3Q8N138 153 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 KLHDC1Q8N7A1 406 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 MRPL53Q96EL3 112 aaKnown RBP14.31□□□□□ -0.12
USP49-202ENST00000373010 SIGLEC8Q9NYZ4 499 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 CSMD2Q7Z408 3487 aa14.31□□□□□ -0.12
USP49-202ENST00000373010 DMRTA1Q5VZB9 504 aa14.3□□□□□ -0.12
USP49-202ENST00000373010 OR4X2Q8NGF9 303 aa14.3□□□□□ -0.12
USP49-202ENST00000373010 USMG5Q96IX5 58 aa14.3□□□□□ -0.12
USP49-202ENST00000373010 IGKV3D-20A0A0C4DH25 116 aa14.3□□□□□ -0.12
USP49-202ENST00000373010 NCR2O95944 276 aa14.3□□□□□ -0.12
USP49-202ENST00000373010 MRPL52Q86TS9 123 aaKnown RBP14.3□□□□□ -0.12
USP49-202ENST00000373010 GPHB5Q86YW7 130 aa14.3□□□□□ -0.12
USP49-202ENST00000373010 BBC3Q96PG8 261 aaPredicted RBP14.3□□□□□ -0.12
USP49-202ENST00000373010 ZNF462Q96JM2 2506 aa14.29□□□□□ -0.12
USP49-202ENST00000373010 H3BUA1 57 aa14.29□□□□□ -0.12
USP49-202ENST00000373010 TMEM95Q3KNT9 176 aa14.29□□□□□ -0.12
USP49-202ENST00000373010 C9orf47Q6ZRZ4 202 aa14.29□□□□□ -0.12
USP49-202ENST00000373010 MAPK1IP1LQ8NDC0 245 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms