RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 LYRM9A8MSI8 78 aa14.23□□□□□ -0.13
TMEM53-205ENST00000372244 KLLNB2CW77 178 aa14.23□□□□□ -0.13
TMEM53-205ENST00000372244 EIF3GO75821 320 aaKnown RBP eCLIP14.23□□□□□ -0.13
TMEM53-205ENST00000372244 UBE2L3P68036 154 aaKnown RBP14.23□□□□□ -0.13
TMEM53-205ENST00000372244 ZNF493Q6ZR52 646 aa14.23□□□□□ -0.13
TMEM53-205ENST00000372244 Q9H3A6 140 aa14.23□□□□□ -0.13
TMEM53-205ENST00000372244 IGHV4-4A0A075B6R2 117 aa14.22□□□□□ -0.13
TMEM53-205ENST00000372244 SLC25A5P05141 298 aaKnown RBP14.22□□□□□ -0.13
TMEM53-205ENST00000372244 NMBP08949 121 aa14.22□□□□□ -0.13
TMEM53-205ENST00000372244 HTN1P15515 57 aa14.22□□□□□ -0.13
TMEM53-205ENST00000372244 CRISP2P16562 243 aa14.22□□□□□ -0.13
TMEM53-205ENST00000372244 RNASE8Q8TDE3 154 aaKnown RBP14.22□□□□□ -0.13
TMEM53-205ENST00000372244 IGKV2-40A0A087WW87 121 aaPredicted RBP14.21□□□□□ -0.13
TMEM53-205ENST00000372244 ZNF324O75467 553 aaPredicted RBP14.21□□□□□ -0.13
TMEM53-205ENST00000372244 IGKV2D-40P01614 121 aaPredicted RBP14.21□□□□□ -0.13
TMEM53-205ENST00000372244 RPL7L1Q6DKI1 246 aaKnown RBP14.21□□□□□ -0.13
TMEM53-205ENST00000372244 C16orf74Q96GX8 76 aa14.21□□□□□ -0.13
TMEM53-205ENST00000372244 TRAV12-3A0A0B4J271 114 aa14.2□□□□□ -0.14
TMEM53-205ENST00000372244 RBAKDNA6NC62 111 aa14.2□□□□□ -0.14
TMEM53-205ENST00000372244 MBP02144 154 aa14.2□□□□□ -0.14
TMEM53-205ENST00000372244 TMEM263Q8WUH6 116 aaKnown RBP14.2□□□□□ -0.14
TMEM53-205ENST00000372244 SH3BGRL3Q9H299 93 aa14.2□□□□□ -0.14
TMEM53-205ENST00000372244 ZNF492Q9P255 531 aa14.2□□□□□ -0.14
TMEM53-205ENST00000372244 J3KRW8 73 aa14.19□□□□□ -0.14
TMEM53-205ENST00000372244 STAG3L2P0CL84 134 aa14.19□□□□□ -0.14
TMEM53-205ENST00000372244 STAG3L3P0CL85 134 aa14.19□□□□□ -0.14
TMEM53-205ENST00000372244 CSN1S1P47710 185 aa14.19□□□□□ -0.14
TMEM53-205ENST00000372244 DAD1P61803 113 aa14.19□□□□□ -0.14
TMEM53-205ENST00000372244 TMEM78Q5T7P6 136 aa14.19□□□□□ -0.14
TMEM53-205ENST00000372244 ZFAND2AQ8N6M9 145 aa14.19□□□□□ -0.14
TMEM53-205ENST00000372244 RAB24Q969Q5 203 aa14.19□□□□□ -0.14
TMEM53-205ENST00000372244 GNPNAT1Q96EK6 184 aaPredicted RBP14.19□□□□□ -0.14
TMEM53-205ENST00000372244 FAM210BQ96KR6 192 aa14.19□□□□□ -0.14
TMEM53-205ENST00000372244 OTORQ9NRC9 128 aa14.19□□□□□ -0.14
TMEM53-205ENST00000372244 TIMM8BQ9Y5J9 83 aaPredicted RBP14.19□□□□□ -0.14
TMEM53-205ENST00000372244 BORCS7-ASMTA0A0B4J1R7 106 aa14.18□□□□□ -0.14
TMEM53-205ENST00000372244 TRBV7-9A0A0J9YWB2 115 aa14.18□□□□□ -0.14
TMEM53-205ENST00000372244 CD300CQ08708 224 aa14.18□□□□□ -0.14
TMEM53-205ENST00000372244 SUN5Q8TC36 379 aa14.18□□□□□ -0.14
TMEM53-205ENST00000372244 RXFP4Q8TDU9 374 aa14.18□□□□□ -0.14
TMEM53-205ENST00000372244 PYGO2Q9BRQ0 406 aa14.18□□□□□ -0.14
TMEM53-205ENST00000372244 C7orf71A4D174 169 aa14.18□□□□□ -0.14
TMEM53-205ENST00000372244 DIRC3C9JPN6 131 aa14.18□□□□□ -0.14
TMEM53-205ENST00000372244 HMGB3O15347 200 aaKnown RBP14.18□□□□□ -0.14
TMEM53-205ENST00000372244 CDC34P49427 236 aaPredicted RBP14.18□□□□□ -0.14
TMEM53-205ENST00000372244 ZNF138P52744 262 aa14.18□□□□□ -0.14
TMEM53-205ENST00000372244 ARL6IP6Q8N6S5 226 aa14.18□□□□□ -0.14
TMEM53-205ENST00000372244 LINC00467Q9BRT7 94 aa14.18□□□□□ -0.14
TMEM53-205ENST00000372244 VPS13DQ5THJ4 4388 aa14.18□□□□□ -0.14
TMEM53-205ENST00000372244 PGPA6NDG6 321 aa14.17□□□□□ -0.14
TMEM53-205ENST00000372244 TAAR5O14804 337 aa14.17□□□□□ -0.14
TMEM53-205ENST00000372244 GPX1P07203 203 aa14.17□□□□□ -0.14
TMEM53-205ENST00000372244 ARL14EPLP0DKL9 152 aa14.17□□□□□ -0.14
TMEM53-205ENST00000372244 RNASE4P34096 147 aaKnown RBP14.17□□□□□ -0.14
TMEM53-205ENST00000372244 CCDC28AQ8IWP9 274 aa14.17□□□□□ -0.14
TMEM53-205ENST00000372244 NDUFAF3Q9BU61 184 aa14.17□□□□□ -0.14
TMEM53-205ENST00000372244 CYTL1Q9NRR1 136 aa14.17□□□□□ -0.14
TMEM53-205ENST00000372244 SMLR1H3BR10 107 aa14.16□□□□□ -0.14
TMEM53-205ENST00000372244 ARPC5O15511 151 aa14.16□□□□□ -0.14
TMEM53-205ENST00000372244 DEFB130BP0DP73 79 aa14.16□□□□□ -0.14
TMEM53-205ENST00000372244 DEFB130AP0DP74 79 aa14.16□□□□□ -0.14
TMEM53-205ENST00000372244 NOP10Q9NPE3 64 aaKnown RBP14.16□□□□□ -0.14
TMEM53-205ENST00000372244 BTN1A1Q13410 526 aa14.15□□□□□ -0.14
TMEM53-205ENST00000372244 PRR9Q5T870 116 aa14.15□□□□□ -0.14
TMEM53-205ENST00000372244 HYLS1Q96M11 299 aa14.15□□□□□ -0.14
TMEM53-205ENST00000372244 CBY3A6NI87 242 aa14.14□□□□□ -0.15
TMEM53-205ENST00000372244 FAM74A1Q5RGS3 127 aa14.14□□□□□ -0.15
TMEM53-205ENST00000372244 LINC00612Q8N6U2 182 aa14.14□□□□□ -0.15
TMEM53-205ENST00000372244 OR11H4Q8NGC9 324 aa14.14□□□□□ -0.15
TMEM53-205ENST00000372244 TMED6Q8WW62 240 aa14.14□□□□□ -0.15
TMEM53-205ENST00000372244 ACTR3CQ9C0K3 210 aaPredicted RBP14.14□□□□□ -0.15
TMEM53-205ENST00000372244 LENEPQ9Y5L5 61 aa14.14□□□□□ -0.15
TMEM53-205ENST00000372244 HTN3P15516 51 aa14.13□□□□□ -0.15
TMEM53-205ENST00000372244 GCHFRP30047 84 aa14.13□□□□□ -0.15
TMEM53-205ENST00000372244 ANXA2RQ3ZCQ2 193 aa14.13□□□□□ -0.15
TMEM53-205ENST00000372244 Q8TAT8 98 aa14.13□□□□□ -0.15
TMEM53-205ENST00000372244 HMSDA8MTL9 139 aa14.12□□□□□ -0.15
TMEM53-205ENST00000372244 DAZ2Q13117 558 aaKnown RBP14.12□□□□□ -0.15
TMEM53-205ENST00000372244 Q6ZQT7 251 aa14.12□□□□□ -0.15
TMEM53-205ENST00000372244 SSX7Q7RTT5 188 aa14.12□□□□□ -0.15
TMEM53-205ENST00000372244 CMTM2Q8TAZ6 248 aa14.12□□□□□ -0.15
TMEM53-205ENST00000372244 CXorf1O96002 111 aa14.12□□□□□ -0.15
TMEM53-205ENST00000372244 ZNF345Q14585 488 aa14.12□□□□□ -0.15
TMEM53-205ENST00000372244 KCNRGQ8N5I3 272 aa14.12□□□□□ -0.15
TMEM53-205ENST00000372244 C11orf72Q8NBR9 251 aa14.12□□□□□ -0.15
TMEM53-205ENST00000372244 ST6GAL2Q96JF0 529 aa14.12□□□□□ -0.15
TMEM53-205ENST00000372244 ZNF726P1Q15940 193 aa14.11□□□□□ -0.15
TMEM53-205ENST00000372244 EIF4E3Q8N5X7 224 aaKnown RBP14.11□□□□□ -0.15
TMEM53-205ENST00000372244 TMEM167BQ9NRX6 74 aa14.11□□□□□ -0.15
TMEM53-205ENST00000372244 ATP5G1P05496 136 aa14.1□□□□□ -0.15
TMEM53-205ENST00000372244 ATP5G3P48201 142 aa14.1□□□□□ -0.15
TMEM53-205ENST00000372244 TMEM88Q6PEY1 159 aa14.1□□□□□ -0.15
TMEM53-205ENST00000372244 GSN-AS1Q9NRJ2 163 aa14.1□□□□□ -0.15
TMEM53-205ENST00000372244 SNURFLB1AK76 121 aa14.09□□□□□ -0.15
TMEM53-205ENST00000372244 GOLT1AQ6ZVE7 132 aa14.09□□□□□ -0.15
TMEM53-205ENST00000372244 ZNF680Q8NEM1 530 aa14.09□□□□□ -0.15
TMEM53-205ENST00000372244 IGHV1OR15-1A0A075B7D0 117 aa14.08□□□□□ -0.16
TMEM53-205ENST00000372244 CTXND1A0A1B0GTU2 59 aa14.08□□□□□ -0.16
TMEM53-205ENST00000372244 P0DMU3 169 aa14.08□□□□□ -0.16
TMEM53-205ENST00000372244 FAM231AP0DMU4 169 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms