RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 H3BNG1 76 aa13.26□□□□□ -0.29
TMEM53-201ENST00000372235 J3KRW8 73 aa13.26□□□□□ -0.29
TMEM53-201ENST00000372235 M0R3E3 92 aa13.26□□□□□ -0.29
TMEM53-201ENST00000372235 GPX1P07203 203 aa13.26□□□□□ -0.29
TMEM53-201ENST00000372235 CRISP2P16562 243 aa13.26□□□□□ -0.29
TMEM53-201ENST00000372235 M6PRP20645 277 aa13.26□□□□□ -0.29
TMEM53-201ENST00000372235 H2BFSP57053 126 aa13.26□□□□□ -0.29
TMEM53-201ENST00000372235 IFITM3Q01628 133 aa13.26□□□□□ -0.29
TMEM53-201ENST00000372235 ICAM4Q14773 271 aa13.26□□□□□ -0.29
TMEM53-201ENST00000372235 C1orf134Q5TEV5 83 aa13.26□□□□□ -0.29
TMEM53-201ENST00000372235 GNPNAT1Q96EK6 184 aaPredicted RBP13.26□□□□□ -0.29
TMEM53-201ENST00000372235 H0YIZ8 118 aa13.25□□□□□ -0.29
TMEM53-201ENST00000372235 MPC2O95563 127 aa13.25□□□□□ -0.29
TMEM53-201ENST00000372235 PRB4P10163 310 aaPredicted RBP13.25□□□□□ -0.29
TMEM53-201ENST00000372235 KIR3DS1Q14943 382 aa13.25□□□□□ -0.29
TMEM53-201ENST00000372235 ANXA2RQ3ZCQ2 193 aa13.25□□□□□ -0.29
TMEM53-201ENST00000372235 GCSAMLQ5JQS6 135 aa13.25□□□□□ -0.29
TMEM53-201ENST00000372235 MIR17HGQ75NE6 70 aa13.25□□□□□ -0.29
TMEM53-201ENST00000372235 EXOC3-AS1Q8N2X6 119 aa13.25□□□□□ -0.29
TMEM53-201ENST00000372235 EIF4E3Q8N5X7 224 aaKnown RBP13.25□□□□□ -0.29
TMEM53-201ENST00000372235 RNF141Q8WVD5 230 aa13.25□□□□□ -0.29
TMEM53-201ENST00000372235 FAM167A-AS1Q96KT0 104 aa13.25□□□□□ -0.29
TMEM53-201ENST00000372235 FAM19A4Q96LR4 140 aa13.25□□□□□ -0.29
TMEM53-201ENST00000372235 AGPAT4-IT1Q9H0P7 198 aa13.25□□□□□ -0.29
TMEM53-201ENST00000372235 HSPB11Q9Y547 144 aa13.25□□□□□ -0.29
TMEM53-201ENST00000372235 RTL8CO15255 209 aa13.24□□□□□ -0.29
TMEM53-201ENST00000372235 OR5I1Q13606 314 aa13.24□□□□□ -0.29
TMEM53-201ENST00000372235 KHDC3LQ587J8 217 aa13.24□□□□□ -0.29
TMEM53-201ENST00000372235 C18orf15Q96N68 181 aa13.24□□□□□ -0.29
TMEM53-201ENST00000372235 GAGE12BA1L429 117 aa13.23□□□□□ -0.29
TMEM53-201ENST00000372235 RBAKDNA6NC62 111 aa13.23□□□□□ -0.29
TMEM53-201ENST00000372235 OR7C2O60412 319 aa13.23□□□□□ -0.29
TMEM53-201ENST00000372235 GAGE7O76087 117 aa13.23□□□□□ -0.29
TMEM53-201ENST00000372235 GAGE12FP0CL80 117 aa13.23□□□□□ -0.29
TMEM53-201ENST00000372235 GAGE12GP0CL81 117 aa13.23□□□□□ -0.29
TMEM53-201ENST00000372235 GAGE12IP0CL82 117 aa13.23□□□□□ -0.29
TMEM53-201ENST00000372235 RPL12P30050 165 aaKnown RBP13.23□□□□□ -0.29
TMEM53-201ENST00000372235 ERCC8Q13216 396 aa13.23□□□□□ -0.29
TMEM53-201ENST00000372235 IBA57Q5T440 356 aaKnown RBP13.23□□□□□ -0.29
TMEM53-201ENST00000372235 FAM122CQ6P4D5 195 aa13.23□□□□□ -0.29
TMEM53-201ENST00000372235 RXFP4Q8TDU9 374 aa13.23□□□□□ -0.29
TMEM53-201ENST00000372235 TRGV2A0A075B6R0 118 aa13.22□□□□□ -0.29
TMEM53-201ENST00000372235 A0A1B0GVY2 172 aa13.22□□□□□ -0.29
TMEM53-201ENST00000372235 RGS13O14921 159 aa13.22□□□□□ -0.29
TMEM53-201ENST00000372235 ZNF324O75467 553 aaPredicted RBP13.22□□□□□ -0.29
TMEM53-201ENST00000372235 RNASE4P34096 147 aaKnown RBP13.22□□□□□ -0.29
TMEM53-201ENST00000372235 FAM74A1Q5RGS3 127 aa13.22□□□□□ -0.29
TMEM53-201ENST00000372235 FXYD5Q96DB9 178 aa13.22□□□□□ -0.29
TMEM53-201ENST00000372235 ZNF492Q9P255 531 aa13.22□□□□□ -0.29
TMEM53-201ENST00000372235 TRAV26-1A0A087WT03 109 aa13.21□□□□□ -0.29
TMEM53-201ENST00000372235 ZNF138P52744 262 aa13.21□□□□□ -0.29
TMEM53-201ENST00000372235 FFAR4Q5NUL3 377 aa13.21□□□□□ -0.29
TMEM53-201ENST00000372235 ZNRF2Q8NHG8 242 aa13.21□□□□□ -0.29
TMEM53-201ENST00000372235 LENEPQ9Y5L5 61 aa13.21□□□□□ -0.29
TMEM53-201ENST00000372235 DNAH10Q8IVF4 4471 aa13.21□□□□□ -0.29
TMEM53-201ENST00000372235 NBDYA0A0U1RRE5 68 aa13.2□□□□□ -0.3
TMEM53-201ENST00000372235 OR10J4P0C629 311 aa13.2□□□□□ -0.3
TMEM53-201ENST00000372235 UBE2L3P68036 154 aaKnown RBP13.2□□□□□ -0.3
TMEM53-201ENST00000372235 ARPC5LQ9BPX5 153 aa13.2□□□□□ -0.3
TMEM53-201ENST00000372235 TCL1AP56279 114 aa13.19□□□□□ -0.3
TMEM53-201ENST00000372235 RANP62826 216 aaKnown RBP13.19□□□□□ -0.3
TMEM53-201ENST00000372235 CD300CQ08708 224 aa13.19□□□□□ -0.3
TMEM53-201ENST00000372235 SLAQ13239 276 aa13.19□□□□□ -0.3
TMEM53-201ENST00000372235 BTN1A1Q13410 526 aa13.19□□□□□ -0.3
TMEM53-201ENST00000372235 ACOT6Q3I5F7 207 aaPredicted RBP13.19□□□□□ -0.3
TMEM53-201ENST00000372235 TTC32Q5I0X7 151 aa13.19□□□□□ -0.3
TMEM53-201ENST00000372235 SSX7Q7RTT5 188 aa13.19□□□□□ -0.3
TMEM53-201ENST00000372235 ARL6IP6Q8N6S5 226 aa13.19□□□□□ -0.3
TMEM53-201ENST00000372235 C11orf72Q8NBR9 251 aa13.19□□□□□ -0.3
TMEM53-201ENST00000372235 GSN-AS1Q9NRJ2 163 aa13.19□□□□□ -0.3
TMEM53-201ENST00000372235 LINC00588Q9Y4M8 146 aa13.19□□□□□ -0.3
TMEM53-201ENST00000372235 IGHV1OR15-1A0A075B7D0 117 aa13.18□□□□□ -0.3
TMEM53-201ENST00000372235 IGKV2-40A0A087WW87 121 aaPredicted RBP13.18□□□□□ -0.3
TMEM53-201ENST00000372235 A0A1W2PPV4 95 aa13.18□□□□□ -0.3
TMEM53-201ENST00000372235 IGKV2D-40P01614 121 aaPredicted RBP13.18□□□□□ -0.3
TMEM53-201ENST00000372235 MED14OSP0DP75 135 aa13.18□□□□□ -0.3
TMEM53-201ENST00000372235 PQLC2Q6ZP29 291 aa13.18□□□□□ -0.3
TMEM53-201ENST00000372235 TMED6Q8WW62 240 aa13.18□□□□□ -0.3
TMEM53-201ENST00000372235 VGLL1Q99990 258 aa13.18□□□□□ -0.3
TMEM53-201ENST00000372235 Q9H3A6 140 aa13.18□□□□□ -0.3
TMEM53-201ENST00000372235 MBD2Q9UBB5 411 aa13.18□□□□□ -0.3
TMEM53-201ENST00000372235 TRGV1A0A0A0MS02 117 aa13.17□□□□□ -0.3
TMEM53-201ENST00000372235 SPINK4O60575 86 aa13.17□□□□□ -0.3
TMEM53-201ENST00000372235 BTF3P20290 206 aaKnown RBP13.17□□□□□ -0.3
TMEM53-201ENST00000372235 ZNF266Q14584 549 aa13.17□□□□□ -0.3
TMEM53-201ENST00000372235 Q6ZTI0 123 aa13.17□□□□□ -0.3
TMEM53-201ENST00000372235 C6orf223Q8N319 242 aa13.17□□□□□ -0.3
TMEM53-201ENST00000372235 ZFAND2AQ8N6M9 145 aa13.17□□□□□ -0.3
TMEM53-201ENST00000372235 CMTM2Q8TAZ6 248 aa13.17□□□□□ -0.3
TMEM53-201ENST00000372235 PHYHIPLQ96FC7 376 aa13.17□□□□□ -0.3
TMEM53-201ENST00000372235 HOXA5P20719 270 aa13.16□□□□□ -0.3
TMEM53-201ENST00000372235 ZNF415Q09FC8 603 aa13.16□□□□□ -0.3
TMEM53-201ENST00000372235 UPK3BQ9BT76 320 aa13.16□□□□□ -0.3
TMEM53-201ENST00000372235 SMIM3Q9BZL3 60 aa13.16□□□□□ -0.3
TMEM53-201ENST00000372235 TMPRSS5Q9H3S3 457 aa13.16□□□□□ -0.3
TMEM53-201ENST00000372235 Q9H8V8 135 aa13.16□□□□□ -0.3
TMEM53-201ENST00000372235 NACAE9PAV3 2078 aa13.16□□□□□ -0.3
TMEM53-201ENST00000372235 HECTD4Q9Y4D8 3996 aa13.15□□□□□ -0.3
TMEM53-201ENST00000372235 A0A0J9YY99 117 aa13.15□□□□□ -0.3
TMEM53-201ENST00000372235 A0A1W2PPQ1 181 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms