RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CABIN1Q9Y6J0 2220 aa12.5□□□□□ -0.41
NUCKS1-201ENST00000367142 LOC105371267A0A1B0GV96 52 aa12.49□□□□□ -0.41
NUCKS1-201ENST00000367142 IGHG4P01861 327 aa12.49□□□□□ -0.41
NUCKS1-201ENST00000367142 NBL1P41271 181 aa12.49□□□□□ -0.41
NUCKS1-201ENST00000367142 TIRAPP58753 221 aa12.49□□□□□ -0.41
NUCKS1-201ENST00000367142 MRPL51Q4U2R6 128 aaKnown RBP12.49□□□□□ -0.41
NUCKS1-201ENST00000367142 SPINK8P0C7L1 97 aa12.49□□□□□ -0.41
NUCKS1-201ENST00000367142 HOXB4P17483 251 aaPredicted RBP12.49□□□□□ -0.41
NUCKS1-201ENST00000367142 CHD5Q8TDI0 1954 aa12.49□□□□□ -0.41
NUCKS1-201ENST00000367142 Q6ZR03 302 aa12.48□□□□□ -0.41
NUCKS1-201ENST00000367142 ICOSQ9Y6W8 199 aa12.48□□□□□ -0.41
NUCKS1-201ENST00000367142 IGLV3-9A0A075B6K5 115 aa12.48□□□□□ -0.41
NUCKS1-201ENST00000367142 LYL1P12980 280 aa12.48□□□□□ -0.41
NUCKS1-201ENST00000367142 XCL1P47992 114 aa12.48□□□□□ -0.41
NUCKS1-201ENST00000367142 MRPL52Q86TS9 123 aaKnown RBP12.48□□□□□ -0.41
NUCKS1-201ENST00000367142 Q6ZQT7 251 aa12.48□□□□□ -0.41
NUCKS1-201ENST00000367142 ZNF503Q96F45 646 aa12.48□□□□□ -0.41
NUCKS1-201ENST00000367142 C9orf153Q5TBE3 101 aa12.48□□□□□ -0.41
NUCKS1-201ENST00000367142 CRYGCP07315 174 aa12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 PLA2G2CQ5R387 149 aa12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 SPANXDQ9BXN6 97 aa12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 ETDCA0A1B0GVM5 59 aa12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 IGHV2-5P01817 119 aa12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 DUX4L9Q6RFH8 374 aaPredicted RBP12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 PIFOQ8TCI5 191 aa12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 MYOFQ9NZM1 2061 aa12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 Q0VG73 95 aa12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 MORN5Q5VZ52 161 aa12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 COX11Q9Y6N1 276 aa12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 U3KQE9 123 aa12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 MDC1Q14676 2089 aaKnown RBP12.47□□□□□ -0.41
NUCKS1-201ENST00000367142 SH2D6Q7Z4S9 175 aa12.46□□□□□ -0.41
NUCKS1-201ENST00000367142 DEFB105AQ8NG35 78 aa12.46□□□□□ -0.41
NUCKS1-201ENST00000367142 IGHV4-59P01825 116 aa12.46□□□□□ -0.41
NUCKS1-201ENST00000367142 GP9P14770 177 aa12.46□□□□□ -0.41
NUCKS1-201ENST00000367142 SBF2Q86WG5 1849 aa12.46□□□□□ -0.41
NUCKS1-201ENST00000367142 IGLV2-23P01705 113 aa12.46□□□□□ -0.42
NUCKS1-201ENST00000367142 CFHR4Q92496 578 aa12.46□□□□□ -0.42
NUCKS1-201ENST00000367142 SPANXA1Q9NS26 97 aa12.46□□□□□ -0.42
NUCKS1-201ENST00000367142 THADAQ6YHU6 1953 aa12.46□□□□□ -0.42
NUCKS1-201ENST00000367142 IGKV1-6A0A0C4DH72 117 aa12.45□□□□□ -0.42
NUCKS1-201ENST00000367142 BUB3O43684 328 aa12.45□□□□□ -0.42
NUCKS1-201ENST00000367142 C16orf74Q96GX8 76 aa12.45□□□□□ -0.42
NUCKS1-201ENST00000367142 C20orf78Q9BR46 151 aa12.45□□□□□ -0.42
NUCKS1-201ENST00000367142 PYGO2Q9BRQ0 406 aa12.45□□□□□ -0.42
NUCKS1-201ENST00000367142 SPART-AS1P0CW21 52 aa12.45□□□□□ -0.42
NUCKS1-201ENST00000367142 PRSS33Q8NF86 280 aa12.45□□□□□ -0.42
NUCKS1-201ENST00000367142 VOPP1Q96AW1 172 aa12.45□□□□□ -0.42
NUCKS1-201ENST00000367142 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.44□□□□□ -0.42
NUCKS1-201ENST00000367142 FOXE3Q13461 319 aa12.44□□□□□ -0.42
NUCKS1-201ENST00000367142 MRPL23Q16540 153 aaKnown RBP12.44□□□□□ -0.42
NUCKS1-201ENST00000367142 IGLV1-44P01699 117 aa12.44□□□□□ -0.42
NUCKS1-201ENST00000367142 FGF6P10767 208 aa12.44□□□□□ -0.42
NUCKS1-201ENST00000367142 PRSS57Q6UWY2 283 aa12.44□□□□□ -0.42
NUCKS1-201ENST00000367142 GTSF1LQ9H1H1 148 aa12.44□□□□□ -0.42
NUCKS1-201ENST00000367142 TPSG1Q9NRR2 321 aa12.44□□□□□ -0.42
NUCKS1-201ENST00000367142 RALGAPA1Q6GYQ0 2036 aa12.44□□□□□ -0.42
NUCKS1-201ENST00000367142 ATP5G1P05496 136 aa12.44□□□□□ -0.42
NUCKS1-201ENST00000367142 KLK5Q9Y337 293 aaPredicted RBP12.43□□□□□ -0.42
NUCKS1-201ENST00000367142 SEC16AO15027 2179 aa12.43□□□□□ -0.42
NUCKS1-201ENST00000367142 SNRNP200O75643 2136 aaKnown RBP12.43□□□□□ -0.42
NUCKS1-201ENST00000367142 WISP1O95388 367 aa12.43□□□□□ -0.42
NUCKS1-201ENST00000367142 C18orf32Q8TCD1 76 aa12.43□□□□□ -0.42
NUCKS1-201ENST00000367142 ABCA7Q8IZY2 2146 aa12.43□□□□□ -0.42
NUCKS1-201ENST00000367142 PDCD11Q14690 1871 aaKnown RBP12.43□□□□□ -0.42
NUCKS1-201ENST00000367142 TRAV12-1A0A0B4J245 112 aa12.43□□□□□ -0.42
NUCKS1-201ENST00000367142 UBE2V1Q13404 147 aa12.43□□□□□ -0.42
NUCKS1-201ENST00000367142 CAMK2N2Q96S95 79 aa12.43□□□□□ -0.42
NUCKS1-201ENST00000367142 KAAG1Q9UBP8 84 aa12.43□□□□□ -0.42
NUCKS1-201ENST00000367142 FAM215AQ9Y5M1 114 aa12.43□□□□□ -0.42
NUCKS1-201ENST00000367142 F8W735 103 aaPredicted RBP12.42□□□□□ -0.42
NUCKS1-201ENST00000367142 K7EM74 188 aa12.42□□□□□ -0.42
NUCKS1-201ENST00000367142 ZNF124Q15973 351 aa12.42□□□□□ -0.42
NUCKS1-201ENST00000367142 FAM231DQ6ZW35 169 aa12.42□□□□□ -0.42
NUCKS1-201ENST00000367142 RNF152Q8N8N0 203 aa12.42□□□□□ -0.42
NUCKS1-201ENST00000367142 SLC25A29Q8N8R3 303 aa12.42□□□□□ -0.42
NUCKS1-201ENST00000367142 DLEU1O43261 78 aa12.42□□□□□ -0.42
NUCKS1-201ENST00000367142 WT1-ASQ06250 92 aa12.42□□□□□ -0.42
NUCKS1-201ENST00000367142 RNASE13Q5GAN3 156 aaKnown RBP12.42□□□□□ -0.42
NUCKS1-201ENST00000367142 CHKB-CPT1BH3BT56 60 aa12.41□□□□□ -0.42
NUCKS1-201ENST00000367142 WDR86Q86TI4 376 aa12.41□□□□□ -0.42
NUCKS1-201ENST00000367142 CARD19Q96LW7 228 aa12.41□□□□□ -0.42
NUCKS1-201ENST00000367142 C4orf48Q5BLP8 95 aa12.41□□□□□ -0.42
NUCKS1-201ENST00000367142 LY6G6EA0A0G2JKS1 128 aa12.41□□□□□ -0.42
NUCKS1-201ENST00000367142 U3KQA8 63 aa12.41□□□□□ -0.42
NUCKS1-201ENST00000367142 J3QQQ9 107 aa12.41□□□□□ -0.42
NUCKS1-201ENST00000367142 PPDPFLQ8WWR9 84 aa12.41□□□□□ -0.42
NUCKS1-201ENST00000367142 PRO1854Q9UHT4 67 aa12.41□□□□□ -0.42
NUCKS1-201ENST00000367142 TINCRA0A1B0GVN0 87 aa12.4□□□□□ -0.42
NUCKS1-201ENST00000367142 KLF2Q9Y5W3 355 aaPredicted RBP12.4□□□□□ -0.42
NUCKS1-201ENST00000367142 BVES-AS1Q5T3Y7 98 aa12.4□□□□□ -0.42
NUCKS1-201ENST00000367142 BOD1L2Q8IYS8 172 aa12.4□□□□□ -0.42
NUCKS1-201ENST00000367142 ZC2HC1AQ96GY0 325 aa12.4□□□□□ -0.42
NUCKS1-201ENST00000367142 MRPL36Q9P0J6 103 aaKnown RBP12.4□□□□□ -0.42
NUCKS1-201ENST00000367142 WNK3Q9BYP7 1800 aa12.4□□□□□ -0.42
NUCKS1-201ENST00000367142 IGLC1P0CG04 106 aa12.4□□□□□ -0.42
NUCKS1-201ENST00000367142 FUSP35637 526 aaKnown RBP eCLIP12.4□□□□□ -0.42
NUCKS1-201ENST00000367142 DEFB136Q30KP8 78 aa12.4□□□□□ -0.42
NUCKS1-201ENST00000367142 C15orf65H3BRN8 121 aa12.4□□□□□ -0.42
NUCKS1-201ENST00000367142 ETV2O00321 342 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms