RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 ARHGAP31Q2M1Z3 1444 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 MYOM3Q5VTT5 1437 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 GRIN2AQ12879 1464 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 EIF4G3O43432 1585 aaKnown RBP1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 MYH13Q9UKX3 1938 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 A0A1B0GV90 55 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 FAM92AA1XBS5 289 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 YPEL1O60688 119 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 CXCL8P10145 99 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 PCBD1P61457 104 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 C1orf137Q5JT78 98 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 ZNF833PQ6ZTB9 187 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 CLECL1Q8IZS7 167 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 Q96M85 177 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 NABP2Q9BQ15 211 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 C2orf88Q9BSF0 95 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 GGACTQ9BVM4 153 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 CST11Q9H112 138 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 COMMD3Q9UBI1 195 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 WDR97A6NE52 1622 aa1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 MDC1Q14676 2089 aaKnown RBP1.79□□□□□ -2.12
RNU6-1249P-201ENST00000363237 SCN3AQ9NY46 2000 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 CEP192Q8TEP8 1941 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 KIAA1549LQ6ZVL6 1849 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 SMG6Q86US8 1419 aaKnown RBP1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 TMEM2Q9UHN6 1383 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 ZNF670-ZNF695F2Z2N8 137 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 C5orf67F2Z3F1 127 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 APOC1P02654 83 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 CKS2P33552 79 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 EMX2Q04743 252 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 NEDD8Q15843 81 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 C10orf55Q5SWW7 151 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 LINC00269Q8N2A0 174 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 TMEM191AQ9H0A3 160 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 SLC35B3Q9H1N7 401 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 TMEM106BQ9NUM4 274 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 DNAJC15Q9Y5T4 150 aa1.78□□□□□ -2.12
RNU6-1249P-201ENST00000363237 KIAA1549Q9HCM3 1950 aa1.78□□□□□ -2.13
RNU6-1249P-201ENST00000363237 LAMB4A4D0S4 1761 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 C9orf170A2RU37 121 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 LINC00587B1AMM8 73 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 HYPMO75409 117 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 RBP4P02753 201 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 CD3DP04234 171 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 CD2P06729 351 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 PLGLB1Q02325 96 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 KRTAP26-1Q6PEX3 210 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 CASC2Q6XLA1 102 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 COA5Q86WW8 74 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 ATOH7Q8N100 152 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 C10orf111Q8N326 155 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 OTOSQ8NHW6 89 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 TMEM203Q969S6 136 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 MPC1Q9Y5U8 109 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 PCDH15Q96QU1 1955 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 KIDINS220Q9ULH0 1771 aa1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 COL5A3P25940 1745 aaPredicted RBP1.77□□□□□ -2.13
RNU6-1249P-201ENST00000363237 FAM135AQ9P2D6 1515 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 BCL9LQ86UU0 1499 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 PTPRGP23470 1445 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 C3orf85A0A1B0GTC6 90 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 FAM236AA0A1B0GUQ0 79 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 FAM236BA0A1B0GV22 79 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 FAM25AB3EWG3 89 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 FAM25CB3EWG5 89 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 FAM25GB3EWG6 89 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 GNG7O60262 68 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 CD14P08571 375 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 GUCA1AP43080 201 aaPredicted RBP1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 WHAMMP3Q1A5X7 153 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 CCSMST1Q4G0I0 132 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 CLLU1Q5K131 121 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 IZUMO2Q6UXV1 221 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 Q8TAT8 98 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 CIB3Q96Q77 187 aaPredicted RBP1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 SAR1AQ9NR31 198 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 CCDC167Q9P0B6 97 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 ZFHX2Q9C0A1 2572 aaPredicted RBP1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 HEATR5BQ9P2D3 2071 aa1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 MYH9P35579 1960 aaKnown RBP1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 HELZP42694 1942 aaKnown RBP1.76□□□□□ -2.13
RNU6-1249P-201ENST00000363237 GBF1Q92538 1859 aa1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 ROCK2O75116 1388 aaKnown RBP1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 IBTKQ9P2D0 1353 aaPredicted RBP1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 CUL9Q8IWT3 2517 aa1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 COL4A4P53420 1690 aaPredicted RBP1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 TRBV20-1A0A075B6N2 111 aa1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 IFITM5A6NNB3 132 aa1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 S100A1P23297 94 aa1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 CNBPP62633 177 aaKnown RBP1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 FOXI2Q6ZQN5 318 aa1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 GKN2Q86XP6 184 aa1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 OR10AG1Q8NH19 301 aa1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 SMIM7Q9BQ49 75 aa1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 PTPRFP10586 1907 aa1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 UHRF1BP1LA0JNW5 1464 aa1.75□□□□□ -2.13
RNU6-1249P-201ENST00000363237 RGS12O14924 1447 aa1.74□□□□□ -2.13
RNU6-1249P-201ENST00000363237 NAIPQ13075 1403 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms