RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 LY6DQ14210 128 aa12.68□□□□□ -0.38
IFT140-201ENST00000361339 SLC25A39Q9BZJ4 359 aaPredicted RBP12.68□□□□□ -0.38
IFT140-201ENST00000361339 HAX1O00165 279 aa12.67□□□□□ -0.38
IFT140-201ENST00000361339 ATP5G2Q06055 141 aa12.67□□□□□ -0.38
IFT140-201ENST00000361339 RIGQ13278 110 aa12.67□□□□□ -0.38
IFT140-201ENST00000361339 Q86TA4 180 aa12.67□□□□□ -0.38
IFT140-201ENST00000361339 C8orf46Q8TAG6 207 aa12.67□□□□□ -0.38
IFT140-201ENST00000361339 ARPC1AQ92747 370 aa12.67□□□□□ -0.38
IFT140-201ENST00000361339 HIGD1AQ9Y241 93 aa12.67□□□□□ -0.38
IFT140-201ENST00000361339 IGKV2D-26A0A0A0MRZ7 120 aa12.67□□□□□ -0.38
IFT140-201ENST00000361339 CFHR4Q92496 578 aa12.67□□□□□ -0.38
IFT140-201ENST00000361339 KLF12Q9Y4X4 402 aa12.67□□□□□ -0.38
IFT140-201ENST00000361339 H3BMG7 143 aa12.66□□□□□ -0.38
IFT140-201ENST00000361339 ZFP36P26651 326 aaKnown RBP12.66□□□□□ -0.38
IFT140-201ENST00000361339 OR5A1Q8NGJ0 315 aa12.66□□□□□ -0.38
IFT140-201ENST00000361339 PRELID3AQ96N28 172 aa12.66□□□□□ -0.38
IFT140-201ENST00000361339 RASL11BQ9BPW5 248 aa12.66□□□□□ -0.38
IFT140-201ENST00000361339 IGHV3-35A0A0C4DH35 117 aa12.66□□□□□ -0.38
IFT140-201ENST00000361339 GAGE12HA6NDE8 117 aa12.66□□□□□ -0.38
IFT140-201ENST00000361339 M0R3E3 92 aa12.66□□□□□ -0.38
IFT140-201ENST00000361339 PPIFP30405 207 aaKnown RBP12.66□□□□□ -0.38
IFT140-201ENST00000361339 CEACAM3P40198 252 aa12.66□□□□□ -0.38
IFT140-201ENST00000361339 RAB9AP51151 201 aa12.66□□□□□ -0.38
IFT140-201ENST00000361339 LY6G5BQ8NDX9 201 aa12.66□□□□□ -0.38
IFT140-201ENST00000361339 SOX21Q9Y651 276 aaPredicted RBP12.66□□□□□ -0.38
IFT140-201ENST00000361339 INSL3P51460 131 aa12.66□□□□□ -0.38
IFT140-201ENST00000361339 SFTA2Q6UW10 78 aa12.65□□□□□ -0.38
IFT140-201ENST00000361339 GTSCR1Q86UQ5 136 aa12.65□□□□□ -0.38
IFT140-201ENST00000361339 IFI27L1Q96BM0 104 aa12.65□□□□□ -0.38
IFT140-201ENST00000361339 ZNF785A8K8V0 405 aa12.65□□□□□ -0.38
IFT140-201ENST00000361339 FBXL19-AS1Q494R0 122 aa12.65□□□□□ -0.38
IFT140-201ENST00000361339 C8orf49Q96NF6 230 aa12.65□□□□□ -0.38
IFT140-201ENST00000361339 DPM3Q9P2X0 92 aa12.65□□□□□ -0.38
IFT140-201ENST00000361339 CELSR2Q9HCU4 2923 aa12.64□□□□□ -0.39
IFT140-201ENST00000361339 NCBP2LA6PVI3 153 aaKnown RBP12.64□□□□□ -0.39
IFT140-201ENST00000361339 NBR2O15453 112 aa12.64□□□□□ -0.39
IFT140-201ENST00000361339 PRSS1P07477 247 aa12.64□□□□□ -0.39
IFT140-201ENST00000361339 LYZL1Q6UWQ5 148 aa12.64□□□□□ -0.39
IFT140-201ENST00000361339 IL4P05112 153 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 C11orf71Q6IPW1 123 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 RAB1BQ9H0U4 201 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 ZNF492Q9P255 531 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 IGLV2-11P01706 119 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 BMI1P35226 326 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 KLRB1Q12918 225 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 CT83Q5H943 113 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 STXBP6Q8NFX7 210 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 GFRA4Q9GZZ7 299 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 SPG11Q96JI7 2443 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 A0A1B0GV72 72 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 CKS1BP61024 79 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 CRYBG3Q68DQ2 2970 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 CCDC144NLQ6NUI1 221 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 OR4X2Q8NGF9 303 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 OR9G4Q8NGQ1 327 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 ATP6V0BQ99437 205 aa12.63□□□□□ -0.39
IFT140-201ENST00000361339 CKS2P33552 79 aa12.62□□□□□ -0.39
IFT140-201ENST00000361339 IGFL4Q6B9Z1 124 aa12.62□□□□□ -0.39
IFT140-201ENST00000361339 VMO1Q7Z5L0 202 aa12.62□□□□□ -0.39
IFT140-201ENST00000361339 VGLL1Q99990 258 aa12.62□□□□□ -0.39
IFT140-201ENST00000361339 AGRNO00468 2067 aa12.62□□□□□ -0.39
IFT140-201ENST00000361339 TRAV26-1A0A087WT03 109 aa12.62□□□□□ -0.39
IFT140-201ENST00000361339 NPIPB6E9PJ23 425 aa12.62□□□□□ -0.39
IFT140-201ENST00000361339 GAS8-AS1O95177 125 aa12.62□□□□□ -0.39
IFT140-201ENST00000361339 EVI2AP22794 236 aa12.62□□□□□ -0.39
IFT140-201ENST00000361339 CRIP1P50238 77 aa12.62□□□□□ -0.39
IFT140-201ENST00000361339 NPYP01303 97 aa12.61□□□□□ -0.39
IFT140-201ENST00000361339 ZNF491Q8N8L2 437 aa12.61□□□□□ -0.39
IFT140-201ENST00000361339 FANCD2OSQ96PS1 177 aa12.61□□□□□ -0.39
IFT140-201ENST00000361339 HBDP02042 147 aa12.61□□□□□ -0.39
IFT140-201ENST00000361339 CD300EQ496F6 205 aaPredicted RBP12.61□□□□□ -0.39
IFT140-201ENST00000361339 OR11H6Q8NGC7 330 aa12.61□□□□□ -0.39
IFT140-201ENST00000361339 UTP20O75691 2785 aaKnown RBP12.61□□□□□ -0.39
IFT140-201ENST00000361339 LGALS9BQ3B8N2 356 aa12.6□□□□□ -0.39
IFT140-201ENST00000361339 LGALS9CQ6DKI2 356 aa12.6□□□□□ -0.39
IFT140-201ENST00000361339 SPAG8Q99932 426 aaPredicted RBP12.6□□□□□ -0.39
IFT140-201ENST00000361339 CHAC1Q9BUX1 264 aa12.6□□□□□ -0.39
IFT140-201ENST00000361339 F8W735 103 aaPredicted RBP12.6□□□□□ -0.39
IFT140-201ENST00000361339 TWIST1Q15672 202 aa12.6□□□□□ -0.39
IFT140-201ENST00000361339 TIMD4Q96H15 378 aa12.6□□□□□ -0.39
IFT140-201ENST00000361339 ODF3BA8MYP8 253 aa12.6□□□□□ -0.39
IFT140-201ENST00000361339 C5orf64Q2M2E5 130 aa12.6□□□□□ -0.39
IFT140-201ENST00000361339 ORMDL3Q8N138 153 aa12.6□□□□□ -0.39
IFT140-201ENST00000361339 TMEM160Q9NX00 188 aa12.6□□□□□ -0.39
IFT140-201ENST00000361339 PSG8Q9UQ74 426 aa12.6□□□□□ -0.39
IFT140-201ENST00000361339 CFAP46Q8IYW2 2715 aa12.59□□□□□ -0.39
IFT140-201ENST00000361339 MRPL51Q4U2R6 128 aaKnown RBP12.59□□□□□ -0.39
IFT140-201ENST00000361339 RNF125Q96EQ8 232 aa12.59□□□□□ -0.39
IFT140-201ENST00000361339 OVOL3O00110 214 aa12.59□□□□□ -0.39
IFT140-201ENST00000361339 SMIM17P0DL12 118 aa12.59□□□□□ -0.39
IFT140-201ENST00000361339 MSRB1Q9NZV6 116 aa12.59□□□□□ -0.39
IFT140-201ENST00000361339 K7EQM0 130 aa12.58□□□□□ -0.4
IFT140-201ENST00000361339 PRTN3P24158 256 aa12.58□□□□□ -0.4
IFT140-201ENST00000361339 SHANK2-AS3Q9BTD1 123 aa12.58□□□□□ -0.4
IFT140-201ENST00000361339 UBTD1Q9HAC8 227 aa12.58□□□□□ -0.4
IFT140-201ENST00000361339 TRBV19A0A075B6N1 114 aa12.58□□□□□ -0.4
IFT140-201ENST00000361339 H3BRN7 92 aa12.57□□□□□ -0.4
IFT140-201ENST00000361339 NDUFA3O95167 84 aa12.57□□□□□ -0.4
IFT140-201ENST00000361339 CT45A10P0DMU9 189 aa12.57□□□□□ -0.4
IFT140-201ENST00000361339 GATA1P15976 413 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms