RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 THAP8Q8NA92 274 aa10.19□□□□□ -0.78
SYNCRIP-201ENST00000355238 SH2D6Q7Z4S9 175 aa10.19□□□□□ -0.78
SYNCRIP-201ENST00000355238 ZNF833PQ6ZTB9 187 aa10.19□□□□□ -0.78
SYNCRIP-201ENST00000355238 PCP2Q8IVA1 136 aa10.19□□□□□ -0.78
SYNCRIP-201ENST00000355238 LINC01545Q5VT33 79 aa10.19□□□□□ -0.78
SYNCRIP-201ENST00000355238 SYNJ2BPP57105 145 aa10.19□□□□□ -0.78
SYNCRIP-201ENST00000355238 KLRD1Q13241 179 aa10.19□□□□□ -0.78
SYNCRIP-201ENST00000355238 HAMPP81172 84 aa10.18□□□□□ -0.78
SYNCRIP-201ENST00000355238 CDK2AP2O75956 126 aa10.18□□□□□ -0.78
SYNCRIP-201ENST00000355238 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
SYNCRIP-201ENST00000355238 RPL32P62910 135 aaKnown RBP10.18□□□□□ -0.78
SYNCRIP-201ENST00000355238 DAZ1Q9NQZ3 744 aaKnown RBP10.18□□□□□ -0.78
SYNCRIP-201ENST00000355238 NUPR1O60356 82 aa10.18□□□□□ -0.78
SYNCRIP-201ENST00000355238 EFNA4P52798 201 aa10.18□□□□□ -0.78
SYNCRIP-201ENST00000355238 CRIPAKQ8N1N5 446 aa10.18□□□□□ -0.78
SYNCRIP-201ENST00000355238 TRBV25-1A0A075B6N4 114 aa10.17□□□□□ -0.78
SYNCRIP-201ENST00000355238 A0A1W2PRX2 142 aa10.17□□□□□ -0.78
SYNCRIP-201ENST00000355238 TDRG1Q3Y452 100 aa10.17□□□□□ -0.78
SYNCRIP-201ENST00000355238 TAX1BP3O14907 124 aa10.17□□□□□ -0.78
SYNCRIP-201ENST00000355238 SRSF2Q01130 221 aaKnown RBP10.17□□□□□ -0.78
SYNCRIP-201ENST00000355238 SDK2Q58EX2 2172 aa10.17□□□□□ -0.78
SYNCRIP-201ENST00000355238 G3V4G9 280 aa10.17□□□□□ -0.78
SYNCRIP-201ENST00000355238 TNS1Q9HBL0 1735 aaKnown RBP10.17□□□□□ -0.78
SYNCRIP-201ENST00000355238 RBM3P98179 157 aaKnown RBP10.17□□□□□ -0.78
SYNCRIP-201ENST00000355238 C8orf86Q6ZUL3 223 aa10.16□□□□□ -0.78
SYNCRIP-201ENST00000355238 TEN1Q86WV5 123 aa10.16□□□□□ -0.78
SYNCRIP-201ENST00000355238 FAM110DQ8TAY7 271 aaPredicted RBP10.16□□□□□ -0.78
SYNCRIP-201ENST00000355238 J3KT08 172 aa10.16□□□□□ -0.78
SYNCRIP-201ENST00000355238 CSRP1P21291 193 aaKnown RBP10.16□□□□□ -0.78
SYNCRIP-201ENST00000355238 ANK1P16157 1881 aa10.16□□□□□ -0.78
SYNCRIP-201ENST00000355238 TMEM219Q86XT9 240 aa10.16□□□□□ -0.78
SYNCRIP-201ENST00000355238 HIGD1BQ9P298 99 aa10.16□□□□□ -0.78
SYNCRIP-201ENST00000355238 DOCK6Q96HP0 2047 aa10.16□□□□□ -0.78
SYNCRIP-201ENST00000355238 IGHV3-53P01767 116 aa10.16□□□□□ -0.78
SYNCRIP-201ENST00000355238 DKK1O94907 266 aa10.15□□□□□ -0.78
SYNCRIP-201ENST00000355238 APC2O95996 2303 aa10.15□□□□□ -0.78
SYNCRIP-201ENST00000355238 ZNF493Q6ZR52 646 aa10.15□□□□□ -0.78
SYNCRIP-201ENST00000355238 DSCR8Q96T75 97 aa10.15□□□□□ -0.78
SYNCRIP-201ENST00000355238 IGLV3-1P01715 115 aa10.15□□□□□ -0.78
SYNCRIP-201ENST00000355238 SIP14410 1827 aa10.15□□□□□ -0.78
SYNCRIP-201ENST00000355238 DOCK9Q9BZ29 2069 aa10.15□□□□□ -0.79
SYNCRIP-201ENST00000355238 PRSS29PA6NIE9 313 aa10.14□□□□□ -0.79
SYNCRIP-201ENST00000355238 ATOX1O00244 68 aa10.14□□□□□ -0.79
SYNCRIP-201ENST00000355238 FAM120AOSQ5T036 256 aa10.14□□□□□ -0.79
SYNCRIP-201ENST00000355238 ANXA2RQ3ZCQ2 193 aa10.14□□□□□ -0.79
SYNCRIP-201ENST00000355238 FANCMQ8IYD8 2048 aa10.14□□□□□ -0.79
SYNCRIP-201ENST00000355238 WT1-ASQ06250 92 aa10.14□□□□□ -0.79
SYNCRIP-201ENST00000355238 KIAA2026Q5HYC2 2103 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 HERVK_113P63121 156 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 Q0VFX4 171 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 LINC00311Q8N616 119 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 CRLF1O75462 422 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 C17orf58Q2M2W7 97 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 ANKRD39Q53RE8 183 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 LYPD2Q6UXB3 125 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 C3orf36Q3SXR2 165 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 MDS2Q8NDY4 140 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 PLA2G2EQ9NZK7 142 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 C15orf65H3BRN8 121 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 NDUFC2O95298 119 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 TCTEX1D4Q5JR98 221 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 C1orf43Q9BWL3 253 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 GATA4P43694 442 aa10.13□□□□□ -0.79
SYNCRIP-201ENST00000355238 IGHV1OR15-1A0A075B7D0 117 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 MBD3L4A6NDZ8 208 aaPredicted RBP10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 MBD3L3A6NE82 208 aaPredicted RBP10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 MBD3L5A6NJ08 208 aaPredicted RBP10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 BAALC-AS2P0C853 105 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 FOXI1Q12951 378 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 ATP6V0E2Q8NHE4 81 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 MBD3L2Q8NHZ7 208 aaPredicted RBP10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 Q8TCH9 128 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 WFDC2Q14508 124 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 CEP290O15078 2479 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 DOCK3Q8IZD9 2030 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 IGHV1-69DA0A0B4J2H0 117 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 IGHG3P01860 377 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 RHOHQ15669 191 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 SCN5AQ14524 2016 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 PFN2P35080 140 aa10.12□□□□□ -0.79
SYNCRIP-201ENST00000355238 ZNRD1Q9P1U0 126 aa10.11□□□□□ -0.79
SYNCRIP-201ENST00000355238 MSRB2Q9Y3D2 182 aa10.11□□□□□ -0.79
SYNCRIP-201ENST00000355238 OVOL3O00110 214 aa10.11□□□□□ -0.79
SYNCRIP-201ENST00000355238 PRSS47A8MTI9 375 aa10.11□□□□□ -0.79
SYNCRIP-201ENST00000355238 PIP4P2Q8N4L2 257 aa10.11□□□□□ -0.79
SYNCRIP-201ENST00000355238 TRAV26-1A0A087WT03 109 aa10.11□□□□□ -0.79
SYNCRIP-201ENST00000355238 ASPHD1Q5U4P2 390 aa10.11□□□□□ -0.79
SYNCRIP-201ENST00000355238 Q8NFD4 153 aa10.11□□□□□ -0.79
SYNCRIP-201ENST00000355238 SPTA1P02549 2419 aa10.11□□□□□ -0.79
SYNCRIP-201ENST00000355238 H3BUX3 64 aa10.1□□□□□ -0.79
SYNCRIP-201ENST00000355238 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
SYNCRIP-201ENST00000355238 CR1LQ2VPA4 569 aa10.1□□□□□ -0.79
SYNCRIP-201ENST00000355238 WDR86Q86TI4 376 aa10.1□□□□□ -0.79
SYNCRIP-201ENST00000355238 PHF3Q92576 2039 aaKnown RBP10.1□□□□□ -0.79
SYNCRIP-201ENST00000355238 TINCRA0A1B0GVN0 87 aa10.1□□□□□ -0.79
SYNCRIP-201ENST00000355238 SUMO4Q6EEV6 95 aa10.1□□□□□ -0.79
SYNCRIP-201ENST00000355238 TRAV12-1A0A0B4J245 112 aa10.1□□□□□ -0.79
SYNCRIP-201ENST00000355238 LTBRP36941 435 aa10.1□□□□□ -0.79
SYNCRIP-201ENST00000355238 FXYD2P54710 66 aa10.09□□□□□ -0.79
SYNCRIP-201ENST00000355238 RSPO1Q2MKA7 263 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms