RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 IGKV3-7A0A075B6H7 116 aa8.25□□□□□ -1.09
ECM1-201ENST00000346569 C19orf71A6NCJ1 209 aa8.25□□□□□ -1.09
ECM1-201ENST00000346569 H7BYZ3 331 aa8.25□□□□□ -1.09
ECM1-201ENST00000346569 K7EQG2 157 aa8.25□□□□□ -1.09
ECM1-201ENST00000346569 MGST1P10620 155 aaKnown RBP8.25□□□□□ -1.09
ECM1-201ENST00000346569 ELOBQ15370 118 aa8.25□□□□□ -1.09
ECM1-201ENST00000346569 DEFB114Q30KQ6 69 aa8.25□□□□□ -1.09
ECM1-201ENST00000346569 SAMD13Q5VXD3 122 aa8.25□□□□□ -1.09
ECM1-201ENST00000346569 C9orf47Q6ZRZ4 202 aa8.25□□□□□ -1.09
ECM1-201ENST00000346569 NUDT10Q8NFP7 164 aa8.25□□□□□ -1.09
ECM1-201ENST00000346569 NUDT11Q96G61 164 aa8.25□□□□□ -1.09
ECM1-201ENST00000346569 PRR25Q96S07 402 aa8.25□□□□□ -1.09
ECM1-201ENST00000346569 RNASE7Q9H1E1 156 aaKnown RBP8.25□□□□□ -1.09
ECM1-201ENST00000346569 M0QZ24 198 aa8.24□□□□□ -1.09
ECM1-201ENST00000346569 OVOL1O14753 267 aa8.24□□□□□ -1.09
ECM1-201ENST00000346569 CRIP1P50238 77 aa8.24□□□□□ -1.09
ECM1-201ENST00000346569 ERVFC1-1P60608 527 aa8.24□□□□□ -1.09
ECM1-201ENST00000346569 ERCC8Q13216 396 aa8.24□□□□□ -1.09
ECM1-201ENST00000346569 SAPCD1Q5SSQ6 148 aa8.24□□□□□ -1.09
ECM1-201ENST00000346569 GBGT1Q8N5D6 347 aa8.24□□□□□ -1.09
ECM1-201ENST00000346569 FAM24BQ8N5W8 94 aa8.24□□□□□ -1.09
ECM1-201ENST00000346569 IMMP2LQ96T52 175 aa8.24□□□□□ -1.09
ECM1-201ENST00000346569 PYGO2Q9BRQ0 406 aa8.24□□□□□ -1.09
ECM1-201ENST00000346569 BIN3Q9NQY0 253 aa8.24□□□□□ -1.09
ECM1-201ENST00000346569 ZNF492Q9P255 531 aa8.24□□□□□ -1.09
ECM1-201ENST00000346569 TRAV2A0A0B4J234 112 aa8.23□□□□□ -1.09
ECM1-201ENST00000346569 ID1P41134 155 aa8.23□□□□□ -1.09
ECM1-201ENST00000346569 NSUN5P1Q3KNT7 163 aa8.23□□□□□ -1.09
ECM1-201ENST00000346569 IBA57Q5T440 356 aaKnown RBP8.23□□□□□ -1.09
ECM1-201ENST00000346569 WFDC3Q8IUB2 231 aa8.23□□□□□ -1.09
ECM1-201ENST00000346569 LINC00477Q96M19 166 aa8.23□□□□□ -1.09
ECM1-201ENST00000346569 ASCL2Q99929 193 aa8.23□□□□□ -1.09
ECM1-201ENST00000346569 TRBV24-1A0A075B6N3 115 aa8.22□□□□□ -1.09
ECM1-201ENST00000346569 NPIPB6E9PJ23 425 aa8.22□□□□□ -1.09
ECM1-201ENST00000346569 CXCL1P09341 107 aa8.22□□□□□ -1.09
ECM1-201ENST00000346569 PAFAH1B2P68402 229 aa8.22□□□□□ -1.09
ECM1-201ENST00000346569 ZC2HC1AQ96GY0 325 aa8.22□□□□□ -1.09
ECM1-201ENST00000346569 C8orf49Q96NF6 230 aa8.22□□□□□ -1.09
ECM1-201ENST00000346569 CITED1Q99966 193 aa8.22□□□□□ -1.09
ECM1-201ENST00000346569 IL36BQ9NZH7 164 aa8.22□□□□□ -1.09
ECM1-201ENST00000346569 LENEPQ9Y5L5 61 aa8.22□□□□□ -1.09
ECM1-201ENST00000346569 URGCP-MRPS24S4R325 110 aa8.22□□□□□ -1.09
ECM1-201ENST00000346569 TRAV25A0A0B4J276 109 aa8.21□□□□□ -1.09
ECM1-201ENST00000346569 GATCO43716 136 aaKnown RBP8.21□□□□□ -1.09
ECM1-201ENST00000346569 ZNF138P52744 262 aa8.21□□□□□ -1.09
ECM1-201ENST00000346569 FAM3BP58499 235 aaPredicted RBP8.21□□□□□ -1.09
ECM1-201ENST00000346569 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.21□□□□□ -1.09
ECM1-201ENST00000346569 ZNF738Q8NE65 137 aa8.21□□□□□ -1.09
ECM1-201ENST00000346569 OR8A1Q8NGG7 326 aa8.21□□□□□ -1.09
ECM1-201ENST00000346569 SPATA3Q8NHX4 192 aa8.21□□□□□ -1.09
ECM1-201ENST00000346569 GPR61Q9BZJ8 451 aa8.21□□□□□ -1.09
ECM1-201ENST00000346569 TGIF2-C20orf24A0A0A6YYL0 155 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 ZNF705DP0CH99 300 aaPredicted RBP8.2□□□□□ -1.1
ECM1-201ENST00000346569 ZNF705BP0CI00 300 aaPredicted RBP8.2□□□□□ -1.1
ECM1-201ENST00000346569 CT45A10P0DMU9 189 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 TFPI2P48307 235 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 DEFB1P60022 68 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 CD300EQ496F6 205 aaPredicted RBP8.2□□□□□ -1.1
ECM1-201ENST00000346569 TMEM78Q5T7P6 136 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 PRR27Q6MZM9 219 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 ZNF575Q86XF7 245 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 TMEM61Q8N0U2 210 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 Q8TAT8 98 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 FAM19A4Q96LR4 140 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 SMIM27A0A1W2PRY6 76 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 ZNF705GA8MUZ8 300 aaPredicted RBP8.2□□□□□ -1.1
ECM1-201ENST00000346569 F6UB75 175 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 ZNF688P0C7X2 276 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 S100PP25815 95 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 ZNF80P51504 273 aaPredicted RBP8.2□□□□□ -1.1
ECM1-201ENST00000346569 SNRPD3P62318 126 aaKnown RBP8.2□□□□□ -1.1
ECM1-201ENST00000346569 SMUG1Q53HV7 270 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 CT83Q5H943 113 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 RBPMS2Q6ZRY4 209 aaKnown RBP8.2□□□□□ -1.1
ECM1-201ENST00000346569 OR4B1Q8NGF8 309 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 OR10J6PQ8NGY7 276 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 DYNLRB2Q8TF09 96 aa8.2□□□□□ -1.1
ECM1-201ENST00000346569 DAZAP1Q96EP5 407 aaKnown RBP8.2□□□□□ -1.1
ECM1-201ENST00000346569 ZNF256Q9Y2P7 627 aaPredicted RBP8.2□□□□□ -1.1
ECM1-201ENST00000346569 SORL1Q92673 2214 aa8.19□□□□□ -1.1
ECM1-201ENST00000346569 TRAV9-1A0A075B6T8 112 aa8.19□□□□□ -1.1
ECM1-201ENST00000346569 TRBV7-9A0A0J9YWB2 115 aa8.19□□□□□ -1.1
ECM1-201ENST00000346569 A0A0J9YX75 114 aa8.19□□□□□ -1.1
ECM1-201ENST00000346569 IZUMO1RA6ND01 250 aa8.19□□□□□ -1.1
ECM1-201ENST00000346569 RAB5AP20339 215 aa8.19□□□□□ -1.1
ECM1-201ENST00000346569 KRTAP24-1Q3LI83 254 aa8.19□□□□□ -1.1
ECM1-201ENST00000346569 PSMG4Q5JS54 123 aa8.19□□□□□ -1.1
ECM1-201ENST00000346569 LINC00482Q8N8I6 264 aa8.19□□□□□ -1.1
ECM1-201ENST00000346569 FAM210BQ96KR6 192 aa8.19□□□□□ -1.1
ECM1-201ENST00000346569 NDFIP1Q9BT67 221 aa8.19□□□□□ -1.1
ECM1-201ENST00000346569 WNK1Q9H4A3 2382 aa8.18□□□□□ -1.1
ECM1-201ENST00000346569 FABP5P3A8MUU1 101 aa8.18□□□□□ -1.1
ECM1-201ENST00000346569 A8MWL6 223 aa8.18□□□□□ -1.1
ECM1-201ENST00000346569 CA1P00915 261 aaPredicted RBP8.18□□□□□ -1.1
ECM1-201ENST00000346569 IGLV1-51P01701 117 aa8.18□□□□□ -1.1
ECM1-201ENST00000346569 P01737 135 aa8.18□□□□□ -1.1
ECM1-201ENST00000346569 TYMSP04818 313 aa8.18□□□□□ -1.1
ECM1-201ENST00000346569 FOXA3P55318 350 aaPredicted RBP8.18□□□□□ -1.1
ECM1-201ENST00000346569 GDF5OSQ5U4N7 250 aa8.18□□□□□ -1.1
ECM1-201ENST00000346569 KCNIP4Q6PIL6 250 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms