RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 C21orf140B9A014 251 aa11.07□□□□□ -0.64
TRIO-202ENST00000344204 CSRP1P21291 193 aaKnown RBP11.07□□□□□ -0.64
TRIO-202ENST00000344204 RPL32P62910 135 aaKnown RBP11.07□□□□□ -0.64
TRIO-202ENST00000344204 RBMY1FQ15415 496 aaKnown RBP11.07□□□□□ -0.64
TRIO-202ENST00000344204 ETV2O00321 342 aaPredicted RBP11.07□□□□□ -0.64
TRIO-202ENST00000344204 ATP5G1P05496 136 aa11.07□□□□□ -0.64
TRIO-202ENST00000344204 TRBV25-1A0A075B6N4 114 aa11.07□□□□□ -0.64
TRIO-202ENST00000344204 IGHV3OR16-8A0A075B7F1 116 aa11.06□□□□□ -0.64
TRIO-202ENST00000344204 C16orf97H3BN30 126 aa11.06□□□□□ -0.64
TRIO-202ENST00000344204 TMEM133Q9H2Q1 129 aa11.06□□□□□ -0.64
TRIO-202ENST00000344204 COX6A1P12074 109 aa11.06□□□□□ -0.64
TRIO-202ENST00000344204 LINC00158P58513 81 aa11.06□□□□□ -0.64
TRIO-202ENST00000344204 A0A087WX48 190 aa11.06□□□□□ -0.64
TRIO-202ENST00000344204 Q6P435 159 aa11.06□□□□□ -0.64
TRIO-202ENST00000344204 ZNF625Q96I27 306 aaPredicted RBP11.06□□□□□ -0.64
TRIO-202ENST00000344204 PKD1L2Q7Z442 2459 aa11.06□□□□□ -0.64
TRIO-202ENST00000344204 SPAARA0A1B0GVQ0 90 aa11.06□□□□□ -0.64
TRIO-202ENST00000344204 FOXF2Q12947 444 aa11.05□□□□□ -0.64
TRIO-202ENST00000344204 IGKV3-20P01619 116 aa11.05□□□□□ -0.64
TRIO-202ENST00000344204 ZNF474Q6S9Z5 364 aaPredicted RBP11.05□□□□□ -0.64
TRIO-202ENST00000344204 FAM57AQ8TBR7 257 aa11.05□□□□□ -0.64
TRIO-202ENST00000344204 PAX4O43316 350 aa11.05□□□□□ -0.64
TRIO-202ENST00000344204 RASL10AQ92737 203 aa11.05□□□□□ -0.64
TRIO-202ENST00000344204 RPP25Q9BUL9 199 aaKnown RBP11.05□□□□□ -0.64
TRIO-202ENST00000344204 LINC00173Q6ZV60 143 aa11.05□□□□□ -0.64
TRIO-202ENST00000344204 SPATA12Q7Z6I5 190 aa11.05□□□□□ -0.64
TRIO-202ENST00000344204 C14orf178Q8N769 122 aaPredicted RBP11.05□□□□□ -0.64
TRIO-202ENST00000344204 C20orf204Q6ZNR8 217 aa11.05□□□□□ -0.64
TRIO-202ENST00000344204 A0A1B0GX51 115 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 V9GYY9 64 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 C5orf63A6NC05 138 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 PSG7Q13046 419 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 C1orf147Q96MC9 270 aaPredicted RBP11.04□□□□□ -0.64
TRIO-202ENST00000344204 IL17RELQ6ZVW7 336 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 CENPVQ7Z7K6 275 aaPredicted RBP11.04□□□□□ -0.64
TRIO-202ENST00000344204 IGKV1-6A0A0C4DH72 117 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 EFEMP2O95967 443 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 PRB4P10163 310 aaPredicted RBP11.04□□□□□ -0.64
TRIO-202ENST00000344204 SSC4DQ8WTU2 575 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 IMMP1LQ96LU5 166 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 YPEL4Q96NS1 127 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 C5orf64Q2M2E5 130 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 ZNF493Q6ZR52 646 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 Q6ZT83 130 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 DUX3Q96PT4 197 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 CR1LQ2VPA4 569 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 UBL5Q9BZL1 73 aa11.04□□□□□ -0.64
TRIO-202ENST00000344204 CECR9P0C854 216 aa11.03□□□□□ -0.64
TRIO-202ENST00000344204 RNASE2P10153 161 aaKnown RBP11.03□□□□□ -0.64
TRIO-202ENST00000344204 PCOLCEQ15113 449 aa11.03□□□□□ -0.64
TRIO-202ENST00000344204 NBR2O15453 112 aa11.03□□□□□ -0.64
TRIO-202ENST00000344204 SMRP1Q8NCR6 262 aa11.03□□□□□ -0.64
TRIO-202ENST00000344204 C8orf49Q96NF6 230 aa11.03□□□□□ -0.64
TRIO-202ENST00000344204 ZCCHC24Q8N2G6 241 aaKnown RBP11.02□□□□□ -0.64
TRIO-202ENST00000344204 FAM216BQ8N7L0 139 aa11.02□□□□□ -0.64
TRIO-202ENST00000344204 LINC01565O15544 149 aa11.02□□□□□ -0.64
TRIO-202ENST00000344204 PCSK5Q92824 1860 aa11.02□□□□□ -0.64
TRIO-202ENST00000344204 PEMTQ9UBM1 199 aa11.02□□□□□ -0.65
TRIO-202ENST00000344204 RPUSD1Q9UJJ7 312 aaKnown RBP11.02□□□□□ -0.65
TRIO-202ENST00000344204 FAM90A27PA6NNH2 459 aa11.02□□□□□ -0.65
TRIO-202ENST00000344204 KNCNA6PVL3 124 aa11.02□□□□□ -0.65
TRIO-202ENST00000344204 SHANK2-AS3Q9BTD1 123 aa11.02□□□□□ -0.65
TRIO-202ENST00000344204 LMO1P25800 156 aa11.02□□□□□ -0.65
TRIO-202ENST00000344204 J3QQQ9 107 aa11.01□□□□□ -0.65
TRIO-202ENST00000344204 OVOL1O14753 267 aa11.01□□□□□ -0.65
TRIO-202ENST00000344204 LY6G5BQ8NDX9 201 aa11.01□□□□□ -0.65
TRIO-202ENST00000344204 TRGV3P03979 118 aa11.01□□□□□ -0.65
TRIO-202ENST00000344204 CCL4P13236 92 aa11.01□□□□□ -0.65
TRIO-202ENST00000344204 DUX5Q96PT3 197 aa11.01□□□□□ -0.65
TRIO-202ENST00000344204 TP53TG1Q9Y2A0 90 aa11.01□□□□□ -0.65
TRIO-202ENST00000344204 LINC00527Q9UJ94 153 aa11.01□□□□□ -0.65
TRIO-202ENST00000344204 CFC1BP0CG36 223 aa11.01□□□□□ -0.65
TRIO-202ENST00000344204 CFC1P0CG37 223 aa11.01□□□□□ -0.65
TRIO-202ENST00000344204 PRR7Q8TB68 274 aa11□□□□□ -0.65
TRIO-202ENST00000344204 TRGV11A0A075B6L2 103 aa11□□□□□ -0.65
TRIO-202ENST00000344204 ZFP36L1Q07352 338 aaKnown RBP11□□□□□ -0.65
TRIO-202ENST00000344204 C2orf66Q6UXQ4 117 aa11□□□□□ -0.65
TRIO-202ENST00000344204 C1orf162Q8NEQ5 155 aaPredicted RBP11□□□□□ -0.65
TRIO-202ENST00000344204 LTAP01374 205 aa11□□□□□ -0.65
TRIO-202ENST00000344204 FLVCR1-AS1Q8TAF5 88 aa11□□□□□ -0.65
TRIO-202ENST00000344204 SIGLEC15Q6ZMC9 328 aa11□□□□□ -0.65
TRIO-202ENST00000344204 IGHV3OR16-12A0A075B7B8 117 aa10.99□□□□□ -0.65
TRIO-202ENST00000344204 ASPHD1Q5U4P2 390 aa10.99□□□□□ -0.65
TRIO-202ENST00000344204 JPT2Q9H910 190 aa10.99□□□□□ -0.65
TRIO-202ENST00000344204 ZNF784Q8NCA9 323 aaPredicted RBP10.99□□□□□ -0.65
TRIO-202ENST00000344204 CHCHD5Q9BSY4 110 aa10.99□□□□□ -0.65
TRIO-202ENST00000344204 SMIM2Q9BVW6 85 aa10.99□□□□□ -0.65
TRIO-202ENST00000344204 A0A0B4J2C4 111 aa10.98□□□□□ -0.65
TRIO-202ENST00000344204 CLEC19AQ6UXS0 136 aa10.98□□□□□ -0.65
TRIO-202ENST00000344204 TFF1P04155 84 aa10.98□□□□□ -0.65
TRIO-202ENST00000344204 RFPL3SP0C7P2 107 aa10.98□□□□□ -0.65
TRIO-202ENST00000344204 FAM168AQ92567 244 aa10.98□□□□□ -0.65
TRIO-202ENST00000344204 FXYD5Q96DB9 178 aa10.98□□□□□ -0.65
TRIO-202ENST00000344204 DPM3Q9P2X0 92 aa10.98□□□□□ -0.65
TRIO-202ENST00000344204 C10orf55Q5SWW7 151 aa10.97□□□□□ -0.65
TRIO-202ENST00000344204 PSPNO60542 156 aa10.97□□□□□ -0.65
TRIO-202ENST00000344204 NDUFA7O95182 113 aa10.97□□□□□ -0.65
TRIO-202ENST00000344204 RAI1Q7Z5J4 1906 aaPredicted RBP10.97□□□□□ -0.65
TRIO-202ENST00000344204 IGKV1-39P01597 117 aa10.97□□□□□ -0.65
TRIO-202ENST00000344204 IGKV1D-39P04432 117 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms