RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 TGIF2-C20orf24A0A0A6YYL0 155 aa16.62■□□□□ 0.25
CACNB1-201ENST00000344140 ZNF705GA8MUZ8 300 aaPredicted RBP16.62■□□□□ 0.25
CACNB1-201ENST00000344140 ADAMTSL5Q6ZMM2 481 aa16.62■□□□□ 0.25
CACNB1-201ENST00000344140 COX8CQ7Z4L0 72 aa16.62■□□□□ 0.25
CACNB1-201ENST00000344140 LURAP1LQ8IV03 231 aa16.62■□□□□ 0.25
CACNB1-201ENST00000344140 GBGT1Q8N5D6 347 aa16.62■□□□□ 0.25
CACNB1-201ENST00000344140 NUDT10Q8NFP7 164 aa16.62■□□□□ 0.25
CACNB1-201ENST00000344140 NUDT11Q96G61 164 aa16.62■□□□□ 0.25
CACNB1-201ENST00000344140 NDFIP1Q9BT67 221 aa16.62■□□□□ 0.25
CACNB1-201ENST00000344140 OVOL1O14753 267 aa16.61■□□□□ 0.25
CACNB1-201ENST00000344140 DAZAP1Q96EP5 407 aaKnown RBP16.61■□□□□ 0.25
CACNB1-201ENST00000344140 BTF3L4Q96K17 158 aa16.61■□□□□ 0.25
CACNB1-201ENST00000344140 PRR25Q96S07 402 aa16.61■□□□□ 0.25
CACNB1-201ENST00000344140 GATCO43716 136 aaKnown RBP16.61■□□□□ 0.25
CACNB1-201ENST00000344140 CXCL1P09341 107 aa16.61■□□□□ 0.25
CACNB1-201ENST00000344140 CT45A10P0DMU9 189 aa16.61■□□□□ 0.25
CACNB1-201ENST00000344140 C9orf47Q6ZRZ4 202 aa16.61■□□□□ 0.25
CACNB1-201ENST00000344140 PYGO2Q9BRQ0 406 aa16.61■□□□□ 0.25
CACNB1-201ENST00000344140 SELENOKQ9Y6D0 94 aa16.61■□□□□ 0.25
CACNB1-201ENST00000344140 C19orf71A6NCJ1 209 aa16.6■□□□□ 0.25
CACNB1-201ENST00000344140 CSN3P07498 182 aa16.6■□□□□ 0.25
CACNB1-201ENST00000344140 PAFAH1B2P68402 229 aa16.6■□□□□ 0.25
CACNB1-201ENST00000344140 TMEM78Q5T7P6 136 aa16.6■□□□□ 0.25
CACNB1-201ENST00000344140 ZC2HC1AQ96GY0 325 aa16.6■□□□□ 0.25
CACNB1-201ENST00000344140 FAM210BQ96KR6 192 aa16.6■□□□□ 0.25
CACNB1-201ENST00000344140 P01737 135 aa16.59■□□□□ 0.25
CACNB1-201ENST00000344140 ERCC8Q13216 396 aa16.59■□□□□ 0.25
CACNB1-201ENST00000344140 NDUFA11Q86Y39 141 aa16.59■□□□□ 0.25
CACNB1-201ENST00000344140 PPP1R14DQ9NXH3 145 aa16.59■□□□□ 0.25
CACNB1-201ENST00000344140 JMJD1CQ15652 2540 aa16.59■□□□□ 0.25
CACNB1-201ENST00000344140 TRAV9-1A0A075B6T8 112 aa16.59■□□□□ 0.25
CACNB1-201ENST00000344140 A0A1W2PPQ1 181 aa16.59■□□□□ 0.25
CACNB1-201ENST00000344140 ADARB2-AS1A8MUL3 147 aa16.59■□□□□ 0.25
CACNB1-201ENST00000344140 LINC00322Q6ZN03 302 aaPredicted RBP16.59■□□□□ 0.25
CACNB1-201ENST00000344140 WFDC3Q8IUB2 231 aa16.59■□□□□ 0.25
CACNB1-201ENST00000344140 OR10J6PQ8NGY7 276 aa16.59■□□□□ 0.25
CACNB1-201ENST00000344140 Q8TAT8 98 aa16.59■□□□□ 0.25
CACNB1-201ENST00000344140 AGPAT4-IT1Q9H0P7 198 aa16.59■□□□□ 0.25
CACNB1-201ENST00000344140 K7EQG2 157 aa16.58■□□□□ 0.24
CACNB1-201ENST00000344140 ZNF138P52744 262 aa16.58■□□□□ 0.24
CACNB1-201ENST00000344140 FAM3BP58499 235 aaPredicted RBP16.58■□□□□ 0.24
CACNB1-201ENST00000344140 SNRPD3P62318 126 aaKnown RBP16.58■□□□□ 0.24
CACNB1-201ENST00000344140 PRIMA1Q86XR5 153 aa16.58■□□□□ 0.24
CACNB1-201ENST00000344140 C8orf49Q96NF6 230 aa16.58■□□□□ 0.24
CACNB1-201ENST00000344140 CT83Q5H943 113 aa16.57■□□□□ 0.24
CACNB1-201ENST00000344140 DYNLRB2Q8TF09 96 aa16.57■□□□□ 0.24
CACNB1-201ENST00000344140 ASCL2Q99929 193 aa16.57■□□□□ 0.24
CACNB1-201ENST00000344140 RPP21Q9H633 154 aaKnown RBP16.57■□□□□ 0.24
CACNB1-201ENST00000344140 OR4B1Q8NGF8 309 aa16.56■□□□□ 0.24
CACNB1-201ENST00000344140 LINC00477Q96M19 166 aa16.56■□□□□ 0.24
CACNB1-201ENST00000344140 NPIPB6E9PJ23 425 aa16.56■□□□□ 0.24
CACNB1-201ENST00000344140 TFPI2P48307 235 aa16.56■□□□□ 0.24
CACNB1-201ENST00000344140 KRTAP10-3P60369 221 aa16.56■□□□□ 0.24
CACNB1-201ENST00000344140 NSUN5P1Q3KNT7 163 aa16.56■□□□□ 0.24
CACNB1-201ENST00000344140 SMUG1Q53HV7 270 aa16.56■□□□□ 0.24
CACNB1-201ENST00000344140 RBPMS2Q6ZRY4 209 aaKnown RBP16.56■□□□□ 0.24
CACNB1-201ENST00000344140 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.56■□□□□ 0.24
CACNB1-201ENST00000344140 SIGLEC8Q9NYZ4 499 aa16.56■□□□□ 0.24
CACNB1-201ENST00000344140 LENEPQ9Y5L5 61 aa16.56■□□□□ 0.24
CACNB1-201ENST00000344140 TRAV2A0A0B4J234 112 aa16.55■□□□□ 0.24
CACNB1-201ENST00000344140 SMIM27A0A1W2PRY6 76 aa16.55■□□□□ 0.24
CACNB1-201ENST00000344140 RPS10P46783 165 aaKnown RBP16.55■□□□□ 0.24
CACNB1-201ENST00000344140 GPR61Q9BZJ8 451 aa16.55■□□□□ 0.24
CACNB1-201ENST00000344140 FAM162BQ5T6X4 162 aa16.54■□□□□ 0.24
CACNB1-201ENST00000344140 OR8A1Q8NGG7 326 aa16.54■□□□□ 0.24
CACNB1-201ENST00000344140 TSKUQ8WUA8 353 aa16.54■□□□□ 0.24
CACNB1-201ENST00000344140 A8MWL6 223 aa16.54■□□□□ 0.24
CACNB1-201ENST00000344140 CRIP1P50238 77 aa16.54■□□□□ 0.24
CACNB1-201ENST00000344140 DEFB114Q30KQ6 69 aa16.54■□□□□ 0.24
CACNB1-201ENST00000344140 CA1P00915 261 aaPredicted RBP16.53■□□□□ 0.24
CACNB1-201ENST00000344140 TYMSP04818 313 aa16.53■□□□□ 0.24
CACNB1-201ENST00000344140 RPL19P84098 196 aaKnown RBP16.53■□□□□ 0.24
CACNB1-201ENST00000344140 ZNF688P0C7X2 276 aa16.52■□□□□ 0.24
CACNB1-201ENST00000344140 HIST1H1AQ02539 215 aaPredicted RBP16.52■□□□□ 0.23
CACNB1-201ENST00000344140 PSMG4Q5JS54 123 aa16.52■□□□□ 0.23
CACNB1-201ENST00000344140 TMEM61Q8N0U2 210 aa16.52■□□□□ 0.23
CACNB1-201ENST00000344140 SRD5A3Q9H8P0 318 aa16.52■□□□□ 0.23
CACNB1-201ENST00000344140 TRAV25A0A0B4J276 109 aa16.51■□□□□ 0.23
CACNB1-201ENST00000344140 C1orf196B1AJZ1 125 aa16.51■□□□□ 0.23
CACNB1-201ENST00000344140 ZNF705DP0CH99 300 aaPredicted RBP16.51■□□□□ 0.23
CACNB1-201ENST00000344140 ZNF705BP0CI00 300 aaPredicted RBP16.51■□□□□ 0.23
CACNB1-201ENST00000344140 OR2D3Q8NGH3 330 aa16.51■□□□□ 0.23
CACNB1-201ENST00000344140 GFRA4Q9GZZ7 299 aa16.51■□□□□ 0.23
CACNB1-201ENST00000344140 TRBV7-9A0A0J9YWB2 115 aa16.5■□□□□ 0.23
CACNB1-201ENST00000344140 FAM231BA6NCW3 169 aa16.5■□□□□ 0.23
CACNB1-201ENST00000344140 SH2D1AO60880 128 aa16.5■□□□□ 0.23
CACNB1-201ENST00000344140 TCL1AP56279 114 aa16.5■□□□□ 0.23
CACNB1-201ENST00000344140 NAT8BQ9UHF3 227 aa16.5■□□□□ 0.23
CACNB1-201ENST00000344140 KRTAP24-1Q3LI83 254 aa16.5■□□□□ 0.23
CACNB1-201ENST00000344140 FABP5P3A8MUU1 101 aa16.49■□□□□ 0.23
CACNB1-201ENST00000344140 F6UB75 175 aa16.49■□□□□ 0.23
CACNB1-201ENST00000344140 CD300EQ496F6 205 aaPredicted RBP16.49■□□□□ 0.23
CACNB1-201ENST00000344140 NEU1Q99519 415 aa16.49■□□□□ 0.23
CACNB1-201ENST00000344140 IZUMO1RA6ND01 250 aa16.48■□□□□ 0.23
CACNB1-201ENST00000344140 ZNF80P51504 273 aaPredicted RBP16.48■□□□□ 0.23
CACNB1-201ENST00000344140 DEFB1P60022 68 aa16.48■□□□□ 0.23
CACNB1-201ENST00000344140 RAB5BP61020 215 aa16.48■□□□□ 0.23
CACNB1-201ENST00000344140 SPAG8Q99932 426 aaPredicted RBP16.48■□□□□ 0.23
CACNB1-201ENST00000344140 XKRY2A2RUG3 117 aa16.47■□□□□ 0.23
CACNB1-201ENST00000344140 OR4C46A6NHA9 309 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 277.4 ms