RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 MRPS16Q9Y3D3 137 aaKnown RBP15.36■□□□□ 0.05
CDK13-202ENST00000340829 Q6ZWC4 215 aa15.36■□□□□ 0.05
CDK13-202ENST00000340829 FAM104BQ5XKR9 115 aa15.36■□□□□ 0.05
CDK13-202ENST00000340829 C8orf86Q6ZUL3 223 aa15.35■□□□□ 0.05
CDK13-202ENST00000340829 VCYO14598 125 aa15.35■□□□□ 0.05
CDK13-202ENST00000340829 ZC2HC1AQ96GY0 325 aa15.35■□□□□ 0.05
CDK13-202ENST00000340829 PCNX3Q9H6A9 2034 aa15.35■□□□□ 0.05
CDK13-202ENST00000340829 ZNF479Q96JC4 524 aa15.35■□□□□ 0.05
CDK13-202ENST00000340829 TMEM131Q92545 1883 aa15.35■□□□□ 0.05
CDK13-202ENST00000340829 STPG4Q8N801 248 aa15.35■□□□□ 0.05
CDK13-202ENST00000340829 C17orf77Q96MU5 243 aa15.35■□□□□ 0.05
CDK13-202ENST00000340829 PRSS46E5RG02 174 aa15.34■□□□□ 0.05
CDK13-202ENST00000340829 MEGF9Q9H1U4 602 aa15.34■□□□□ 0.05
CDK13-202ENST00000340829 TRGV1A0A0A0MS02 117 aa15.34■□□□□ 0.05
CDK13-202ENST00000340829 ZNF491Q8N8L2 437 aa15.34■□□□□ 0.05
CDK13-202ENST00000340829 C8orf31Q8N9H6 132 aa15.34■□□□□ 0.05
CDK13-202ENST00000340829 UBE2E2Q96LR5 201 aa15.34■□□□□ 0.05
CDK13-202ENST00000340829 IGHV3-53P01767 116 aa15.34■□□□□ 0.05
CDK13-202ENST00000340829 IGF2-ASQ6U949 168 aa15.34■□□□□ 0.05
CDK13-202ENST00000340829 ANKHD1Q8IWZ3 2542 aaKnown RBP15.33■□□□□ 0.05
CDK13-202ENST00000340829 ACACBO00763 2458 aa15.33■□□□□ 0.05
CDK13-202ENST00000340829 NOTCH2Q04721 2471 aa15.33■□□□□ 0.05
CDK13-202ENST00000340829 LINC01549A6NIU2 74 aa15.33■□□□□ 0.05
CDK13-202ENST00000340829 SAMD5Q5TGI4 173 aa15.33■□□□□ 0.04
CDK13-202ENST00000340829 DEFB131AP59861 70 aa15.33■□□□□ 0.04
CDK13-202ENST00000340829 IGLV2-14P01704 120 aa15.33■□□□□ 0.04
CDK13-202ENST00000340829 ZNF415Q09FC8 603 aa15.33■□□□□ 0.04
CDK13-202ENST00000340829 SPOCK3Q9BQ16 436 aa15.33■□□□□ 0.04
CDK13-202ENST00000340829 CHCHD5Q9BSY4 110 aa15.33■□□□□ 0.04
CDK13-202ENST00000340829 DLEU1O43261 78 aa15.32■□□□□ 0.04
CDK13-202ENST00000340829 PLNP26678 52 aa15.32■□□□□ 0.04
CDK13-202ENST00000340829 RITA1Q96K30 269 aa15.32■□□□□ 0.04
CDK13-202ENST00000340829 MSMPQ1L6U9 139 aa15.32■□□□□ 0.04
CDK13-202ENST00000340829 GATA3P23771 443 aa15.32■□□□□ 0.04
CDK13-202ENST00000340829 VGLL1Q99990 258 aa15.32■□□□□ 0.04
CDK13-202ENST00000340829 PTPRQQ9UMZ3 2332 aa15.31■□□□□ 0.04
CDK13-202ENST00000340829 RPL35AP18077 110 aaKnown RBP15.31■□□□□ 0.04
CDK13-202ENST00000340829 C20orf144Q9BQM9 153 aa15.31■□□□□ 0.04
CDK13-202ENST00000340829 TRBV7-9A0A0J9YWB2 115 aa15.31■□□□□ 0.04
CDK13-202ENST00000340829 IGHV4-39P01824 125 aa15.31■□□□□ 0.04
CDK13-202ENST00000340829 MRPL51Q4U2R6 128 aaKnown RBP15.3■□□□□ 0.04
CDK13-202ENST00000340829 PRSS57Q6UWY2 283 aa15.3■□□□□ 0.04
CDK13-202ENST00000340829 RIPPLY3P57055 190 aa15.3■□□□□ 0.04
CDK13-202ENST00000340829 SPINK13Q1W4C9 94 aa15.3■□□□□ 0.04
CDK13-202ENST00000340829 Q5PR19 223 aa15.3■□□□□ 0.04
CDK13-202ENST00000340829 CUL9Q8IWT3 2517 aa15.3■□□□□ 0.04
CDK13-202ENST00000340829 ADARB2-AS1A8MUL3 147 aa15.3■□□□□ 0.04
CDK13-202ENST00000340829 TDGF1P3P51864 188 aa15.3■□□□□ 0.04
CDK13-202ENST00000340829 PRR14LQ5THK1 2151 aa15.29■□□□□ 0.04
CDK13-202ENST00000340829 HOXB4P17483 251 aaPredicted RBP15.29■□□□□ 0.04
CDK13-202ENST00000340829 HLA-DMBP28068 263 aa15.29■□□□□ 0.04
CDK13-202ENST00000340829 TTC32Q5I0X7 151 aa15.29■□□□□ 0.04
CDK13-202ENST00000340829 OR5A1Q8NGJ0 315 aa15.29■□□□□ 0.04
CDK13-202ENST00000340829 CFAP161Q6P656 301 aa15.29■□□□□ 0.04
CDK13-202ENST00000340829 MORN5Q5VZ52 161 aa15.28■□□□□ 0.04
CDK13-202ENST00000340829 IGHV1-24A0A0C4DH33 117 aa15.28■□□□□ 0.04
CDK13-202ENST00000340829 EML6Q6ZMW3 1958 aa15.28■□□□□ 0.04
CDK13-202ENST00000340829 TRAV26-2A0A0B4J265 109 aa15.28■□□□□ 0.04
CDK13-202ENST00000340829 NPC2P61916 151 aa15.28■□□□□ 0.04
CDK13-202ENST00000340829 ALPK3Q96L96 1907 aa15.28■□□□□ 0.04
CDK13-202ENST00000340829 WDR87Q6ZQQ6 2873 aa15.28■□□□□ 0.04
CDK13-202ENST00000340829 NDUFA4O00483 81 aa15.27■□□□□ 0.04
CDK13-202ENST00000340829 INSP01308 110 aa15.27■□□□□ 0.04
CDK13-202ENST00000340829 ZNF124Q15973 351 aa15.27■□□□□ 0.04
CDK13-202ENST00000340829 KLK9Q9UKQ9 250 aa15.27■□□□□ 0.04
CDK13-202ENST00000340829 KNCNA6PVL3 124 aa15.27■□□□□ 0.04
CDK13-202ENST00000340829 RPL36AP83881 106 aaKnown RBP15.27■□□□□ 0.04
CDK13-202ENST00000340829 RPL36ALQ969Q0 106 aaKnown RBP15.27■□□□□ 0.04
CDK13-202ENST00000340829 LTAP01374 205 aa15.27■□□□□ 0.04
CDK13-202ENST00000340829 TEX43Q6ZNM6 134 aa15.27■□□□□ 0.04
CDK13-202ENST00000340829 SNHG12Q9BXW3 62 aa15.27■□□□□ 0.03
CDK13-202ENST00000340829 PHLDA1Q8WV24 401 aaPredicted RBP15.26■□□□□ 0.03
CDK13-202ENST00000340829 Q6ZPA2 131 aa15.26■□□□□ 0.03
CDK13-202ENST00000340829 MALP21145 153 aa15.26■□□□□ 0.03
CDK13-202ENST00000340829 CRIP3Q6Q6R5 217 aa15.26■□□□□ 0.03
CDK13-202ENST00000340829 OR11H6Q8NGC7 330 aa15.25■□□□□ 0.03
CDK13-202ENST00000340829 KIR3DS1Q14943 382 aa15.25■□□□□ 0.03
CDK13-202ENST00000340829 C1orf122Q6ZSJ8 110 aa15.25■□□□□ 0.03
CDK13-202ENST00000340829 ANXA2RQ3ZCQ2 193 aa15.25■□□□□ 0.03
CDK13-202ENST00000340829 PAX2Q02962 417 aa15.24■□□□□ 0.03
CDK13-202ENST00000340829 Q96MF0 132 aa15.24■□□□□ 0.03
CDK13-202ENST00000340829 TRAV12-2A0A075B6T6 113 aa15.24■□□□□ 0.03
CDK13-202ENST00000340829 IGLC2P0DOY2 106 aa15.24■□□□□ 0.03
CDK13-202ENST00000340829 IGLC3P0DOY3 106 aa15.24■□□□□ 0.03
CDK13-202ENST00000340829 SIGLEC8Q9NYZ4 499 aa15.24■□□□□ 0.03
CDK13-202ENST00000340829 CMC4P56277 68 aaPredicted RBP15.24■□□□□ 0.03
CDK13-202ENST00000340829 PATE2Q6UY27 113 aa15.24■□□□□ 0.03
CDK13-202ENST00000340829 CDPF1Q6NVV7 123 aa15.24■□□□□ 0.03
CDK13-202ENST00000340829 TMEM238C9JI98 176 aa15.23■□□□□ 0.03
CDK13-202ENST00000340829 NPYP01303 97 aa15.23■□□□□ 0.03
CDK13-202ENST00000340829 C1orf159Q96HA4 380 aa15.23■□□□□ 0.03
CDK13-202ENST00000340829 CHAC1Q9BUX1 264 aa15.23■□□□□ 0.03
CDK13-202ENST00000340829 C2orf66Q6UXQ4 117 aa15.23■□□□□ 0.03
CDK13-202ENST00000340829 Q8N8P6 123 aa15.23■□□□□ 0.03
CDK13-202ENST00000340829 XCL2Q9UBD3 114 aa15.23■□□□□ 0.03
CDK13-202ENST00000340829 TRAV8-2A0A0B4J237 113 aa15.23■□□□□ 0.03
CDK13-202ENST00000340829 ERG28Q9UKR5 140 aa15.23■□□□□ 0.03
CDK13-202ENST00000340829 CACNA1AO00555 2505 aa15.23■□□□□ 0.03
CDK13-202ENST00000340829 GAGE13Q4V321 117 aa15.22■□□□□ 0.03
CDK13-202ENST00000340829 MRPL52Q86TS9 123 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms