RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 MSRB1Q9NZV6 116 aa9.3□□□□□ -0.92
RBM39-202ENST00000338163 GAS8-AS1O95177 125 aa9.3□□□□□ -0.92
RBM39-202ENST00000338163 CD40P25942 277 aa9.3□□□□□ -0.92
RBM39-202ENST00000338163 SHANK2-AS3Q9BTD1 123 aa9.3□□□□□ -0.92
RBM39-202ENST00000338163 H3BMG7 143 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 SPTAN1Q13813 2472 aaKnown RBP9.29□□□□□ -0.92
RBM39-202ENST00000338163 ETDBQ3ZM63 59 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 KLF17Q5JT82 389 aaPredicted RBP9.29□□□□□ -0.92
RBM39-202ENST00000338163 IGFL4Q6B9Z1 124 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 AMTNQ6UX39 209 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 SH2D6Q7Z4S9 175 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 RNF125Q96EQ8 232 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 FOXC2Q99958 501 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 MBD3L4A6NDZ8 208 aaPredicted RBP9.29□□□□□ -0.92
RBM39-202ENST00000338163 MBD3L3A6NE82 208 aaPredicted RBP9.29□□□□□ -0.92
RBM39-202ENST00000338163 MBD3L5A6NJ08 208 aaPredicted RBP9.29□□□□□ -0.92
RBM39-202ENST00000338163 COX7A1P24310 79 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 ZC2HC1BQ5TFG8 222 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 MBD3L2Q8NHZ7 208 aaPredicted RBP9.29□□□□□ -0.92
RBM39-202ENST00000338163 TMEM160Q9NX00 188 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 RALYQ9UKM9 306 aaKnown RBP9.29□□□□□ -0.92
RBM39-202ENST00000338163 TRBV25-1A0A075B6N4 114 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 GAGE12HA6NDE8 117 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 TEX22C9J3V5 150 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 J3KRW8 73 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 ORM1P02763 201 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 IGHV1-8P0DP01 117 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 PPIFP30405 207 aaKnown RBP9.29□□□□□ -0.92
RBM39-202ENST00000338163 ARPC1AQ92747 370 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 TNFRSF14Q92956 283 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 MAP1LC3AQ9H492 121 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 CTSZQ9UBR2 303 aa9.29□□□□□ -0.92
RBM39-202ENST00000338163 SPTBN1Q01082 2364 aaKnown RBP9.28□□□□□ -0.92
RBM39-202ENST00000338163 WI2-2373I1.2A0A1W2PRP0 233 aa9.28□□□□□ -0.92
RBM39-202ENST00000338163 C17orf100A8MU93 164 aa9.28□□□□□ -0.92
RBM39-202ENST00000338163 EGR2P11161 476 aaPredicted RBP9.28□□□□□ -0.92
RBM39-202ENST00000338163 TMEM108Q6UXF1 575 aa9.28□□□□□ -0.92
RBM39-202ENST00000338163 GATD1Q8NB37 220 aa9.28□□□□□ -0.92
RBM39-202ENST00000338163 U3KQK5 164 aa9.28□□□□□ -0.92
RBM39-202ENST00000338163 KMT2BQ9UMN6 2715 aaPredicted RBP9.28□□□□□ -0.92
RBM39-202ENST00000338163 IGHV3OR16-8A0A075B7F1 116 aa9.28□□□□□ -0.92
RBM39-202ENST00000338163 VSTM5A8MXK1 200 aa9.28□□□□□ -0.92
RBM39-202ENST00000338163 I3L2K1 104 aa9.28□□□□□ -0.92
RBM39-202ENST00000338163 LOXP28300 417 aaPredicted RBP9.28□□□□□ -0.92
RBM39-202ENST00000338163 BMI1P35226 326 aa9.28□□□□□ -0.92
RBM39-202ENST00000338163 LCNL1Q6ZST4 164 aa9.28□□□□□ -0.92
RBM39-202ENST00000338163 H3BRN7 92 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 J3QR89 54 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 CCL21O00585 134 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 IGKCP01834 107 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 GATA1P15976 413 aaPredicted RBP9.27□□□□□ -0.93
RBM39-202ENST00000338163 ODF1Q14990 250 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 ZNF479Q96JC4 524 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 HIVEP3Q5T1R4 2406 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 A0A0G2JNJ9 132 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 ZNF562Q6V9R5 426 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 ZNF491Q8N8L2 437 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 IGFBPL1Q8WX77 278 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 CLUHP3Q96NS8 147 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 Q9UFV3 132 aa9.27□□□□□ -0.93
RBM39-202ENST00000338163 TRBV6-1A0A0K0K1D8 114 aa9.26□□□□□ -0.93
RBM39-202ENST00000338163 TMEM178BH3BS89 294 aa9.26□□□□□ -0.93
RBM39-202ENST00000338163 PAX8Q06710 450 aa9.26□□□□□ -0.93
RBM39-202ENST00000338163 CD300EQ496F6 205 aaPredicted RBP9.26□□□□□ -0.93
RBM39-202ENST00000338163 LINC00311Q8N616 119 aa9.26□□□□□ -0.93
RBM39-202ENST00000338163 HHLA3Q9XRX5 114 aa9.26□□□□□ -0.93
RBM39-202ENST00000338163 LRBAP50851 2863 aa9.26□□□□□ -0.93
RBM39-202ENST00000338163 A0A1B0GV72 72 aa9.26□□□□□ -0.93
RBM39-202ENST00000338163 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.26□□□□□ -0.93
RBM39-202ENST00000338163 ADIPOQQ15848 244 aa9.26□□□□□ -0.93
RBM39-202ENST00000338163 WFDC12Q8WWY7 111 aa9.26□□□□□ -0.93
RBM39-202ENST00000338163 TMEM158Q8WZ71 300 aa9.26□□□□□ -0.93
RBM39-202ENST00000338163 RPEQ96AT9 228 aa9.26□□□□□ -0.93
RBM39-202ENST00000338163 VKORC1Q9BQB6 163 aa9.26□□□□□ -0.93
RBM39-202ENST00000338163 TRAV40A0A0B4J280 105 aa9.25□□□□□ -0.93
RBM39-202ENST00000338163 IGHV1-3A0A0C4DH29 117 aa9.25□□□□□ -0.93
RBM39-202ENST00000338163 IGHV3-35A0A0C4DH35 117 aa9.25□□□□□ -0.93
RBM39-202ENST00000338163 IGHV3-23P01764 117 aa9.25□□□□□ -0.93
RBM39-202ENST00000338163 GNLYP22749 145 aa9.25□□□□□ -0.93
RBM39-202ENST00000338163 ZNF80P51504 273 aaPredicted RBP9.25□□□□□ -0.93
RBM39-202ENST00000338163 CEND1Q8N111 149 aa9.25□□□□□ -0.93
RBM39-202ENST00000338163 LYPD1Q8N2G4 141 aa9.25□□□□□ -0.93
RBM39-202ENST00000338163 K7EIM0 57 aa9.25□□□□□ -0.93
RBM39-202ENST00000338163 TMEM155Q4W5P6 130 aa9.25□□□□□ -0.93
RBM39-202ENST00000338163 PVRIGQ6DKI7 326 aa9.25□□□□□ -0.93
RBM39-202ENST00000338163 HIST1H4GQ99525 98 aa9.25□□□□□ -0.93
RBM39-202ENST00000338163 SPANXB1Q9NS25 103 aaPredicted RBP9.25□□□□□ -0.93
RBM39-202ENST00000338163 AGRNO00468 2067 aa9.25□□□□□ -0.93
RBM39-202ENST00000338163 DPM2O94777 84 aa9.24□□□□□ -0.93
RBM39-202ENST00000338163 TNFRSF6BO95407 300 aa9.24□□□□□ -0.93
RBM39-202ENST00000338163 HLA-DMBP28068 263 aa9.24□□□□□ -0.93
RBM39-202ENST00000338163 PRR25Q96S07 402 aa9.24□□□□□ -0.93
RBM39-202ENST00000338163 INSL3P51460 131 aa9.24□□□□□ -0.93
RBM39-202ENST00000338163 ATP5G2Q06055 141 aa9.24□□□□□ -0.93
RBM39-202ENST00000338163 DYNLRB1Q9NP97 96 aa9.24□□□□□ -0.93
RBM39-202ENST00000338163 MRPL35Q9NZE8 188 aaKnown RBP9.24□□□□□ -0.93
RBM39-202ENST00000338163 SVEP1Q4LDE5 3571 aa9.24□□□□□ -0.93
RBM39-202ENST00000338163 IGLL5B9A064 214 aa9.24□□□□□ -0.93
RBM39-202ENST00000338163 SFTA2Q6UW10 78 aa9.24□□□□□ -0.93
RBM39-202ENST00000338163 FOXI2Q6ZQN5 318 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms