RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 NUP37Q8NFH4 326 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 OR10AG1Q8NH19 301 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 ZNF502Q8TBZ5 544 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 SIGMAR1Q99720 223 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 TTTY13Q9BZ97 58 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 C1RLQ9NZP8 487 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 RAB9AP51151 201 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 C5orf64Q2M2E5 130 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 COA6Q5JTJ3 125 aaKnown RBP6.52□□□□□ -1.37
HPS4-201ENST00000336873 HIST2H2BDQ6DRA6 164 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 GTSF1Q8WW33 167 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 FMC1Q96HJ9 113 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 VGLL1Q99990 258 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 JKAMPQ9P055 326 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 TGFAP01135 160 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 IGKV1-17P01599 117 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 ATP5IP56385 69 aaPredicted RBP6.52□□□□□ -1.37
HPS4-201ENST00000336873 TEX36Q5VZQ5 186 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 CCDC144NLQ6NUI1 221 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 MTURNQ8N3F0 131 aa6.52□□□□□ -1.37
HPS4-201ENST00000336873 TRAV9-2A0A087WT02 112 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 TSPOP30536 169 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 SAA4P35542 130 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 FER1L6-AS1Q8NA97 138 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 IGKV1D-37A0A075B6S9 117 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 IGHV3OR16-12A0A075B7B8 117 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 DLX6P56179 175 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 FAM106AQ4KMX7 169 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 OTORQ9NRC9 128 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 H3BVH4 76 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 NDUFA3O95167 84 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 IGLV2-8P01709 118 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 IGLC2P0DOY2 106 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 IGLC3P0DOY3 106 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 GNLYP22749 145 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 OR10J3Q5JRS4 329 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 Q86TA4 180 aa6.51□□□□□ -1.37
HPS4-201ENST00000336873 TRAV26-1A0A087WT03 109 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 LINC01548A6NM66 108 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 H7C2G1 150 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 SAP30O75446 220 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 CEACAM4O75871 244 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 PPBPP02775 128 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 C11orf52Q96A22 123 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 ZNF414Q96IQ9 312 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 TRGV9Q99603 122 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 FOXC2Q99958 501 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 C7orf69Q9H7B7 122 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 F6UB75 175 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 SYS1-DBNDD2H3BUS1 97 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 H3BUT2 72 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 K7EP13 123 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 ATP6V0E1O15342 81 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 SH2D1AO60880 128 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 FCN3O75636 299 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 IGLV2-23P01705 113 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 LINC00477Q96M19 166 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 METTL26Q96S19 204 aa6.5□□□□□ -1.37
HPS4-201ENST00000336873 SOX21Q9Y651 276 aaPredicted RBP6.5□□□□□ -1.37
HPS4-201ENST00000336873 IGHV1-24A0A0C4DH33 117 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 SMIM17P0DL12 118 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 LEPP41159 167 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 PAX2Q02962 417 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 TMEM30BQ3MIR4 351 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 SCGB1D4Q6XE38 83 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 MRPL52Q86TS9 123 aaKnown RBP6.49□□□□□ -1.37
HPS4-201ENST00000336873 ORMDL3Q8N138 153 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 ZNF491Q8N8L2 437 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 SMIM27A0A1W2PRY6 76 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 VWC2LB2RUY7 222 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 CRYBA4P53673 196 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 Q0VG73 95 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 ATP6V0BQ99437 205 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 C20orf144Q9BQM9 153 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 PHLDA3Q9Y5J5 127 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 HECTD1Q9ULT8 2610 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 LINC00310P59036 64 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 GTSCR1Q86UQ5 136 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 FAM169BQ8N8A8 192 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 LY96Q9Y6Y9 160 aa6.49□□□□□ -1.37
HPS4-201ENST00000336873 TRBV19A0A075B6N1 114 aa6.48□□□□□ -1.37
HPS4-201ENST00000336873 RNASE4P34096 147 aaKnown RBP6.48□□□□□ -1.37
HPS4-201ENST00000336873 LOXL1Q08397 574 aaPredicted RBP6.48□□□□□ -1.37
HPS4-201ENST00000336873 POU2AF1Q16633 256 aa6.48□□□□□ -1.37
HPS4-201ENST00000336873 NEGR1Q7Z3B1 354 aa6.48□□□□□ -1.37
HPS4-201ENST00000336873 AGRNO00468 2067 aa6.48□□□□□ -1.37
HPS4-201ENST00000336873 KIR2DL5BA0A0G2JN68 375 aa6.48□□□□□ -1.37
HPS4-201ENST00000336873 KIR2DL5BA0A0G2JPC4 375 aa6.48□□□□□ -1.37
HPS4-201ENST00000336873 IL17RELQ6ZVW7 336 aa6.48□□□□□ -1.37
HPS4-201ENST00000336873 KIR2DL5AQ8N109 375 aa6.48□□□□□ -1.37
HPS4-201ENST00000336873 DYNAPQ8N1N2 210 aa6.48□□□□□ -1.37
HPS4-201ENST00000336873 TOMM40O96008 361 aa6.48□□□□□ -1.37
HPS4-201ENST00000336873 ZFP36P26651 326 aaKnown RBP6.48□□□□□ -1.37
HPS4-201ENST00000336873 PSG3Q16557 428 aa6.48□□□□□ -1.37
HPS4-201ENST00000336873 JMJD8Q96S16 334 aa6.48□□□□□ -1.37
HPS4-201ENST00000336873 PEF1Q9UBV8 284 aaKnown RBP6.48□□□□□ -1.37
HPS4-201ENST00000336873 IGHV3-64A0A075B6Q5 118 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 PRAC2D3DTV9 90 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 K7EIM0 57 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 AZU1P20160 251 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms