RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 GHRHP01286 108 aa13.63□□□□□ -0.23
TRAPPC11-201ENST00000334690 DIAPH2-AS1Q14236 149 aa13.63□□□□□ -0.23
TRAPPC11-201ENST00000334690 KIR3DS1Q14943 382 aa13.63□□□□□ -0.23
TRAPPC11-201ENST00000334690 IL17RELQ6ZVW7 336 aa13.63□□□□□ -0.23
TRAPPC11-201ENST00000334690 SNHG12Q9BXW3 62 aa13.62□□□□□ -0.23
TRAPPC11-201ENST00000334690 IGHV3-64A0A075B6Q5 118 aa13.62□□□□□ -0.23
TRAPPC11-201ENST00000334690 PYGO2Q9BRQ0 406 aa13.62□□□□□ -0.23
TRAPPC11-201ENST00000334690 C8orf49Q96NF6 230 aa13.61□□□□□ -0.23
TRAPPC11-201ENST00000334690 IGLC7A0M8Q6 106 aa13.61□□□□□ -0.23
TRAPPC11-201ENST00000334690 LHBP01229 141 aa13.61□□□□□ -0.23
TRAPPC11-201ENST00000334690 IGHV4-39P01824 125 aa13.61□□□□□ -0.23
TRAPPC11-201ENST00000334690 COA6Q5JTJ3 125 aaKnown RBP13.61□□□□□ -0.23
TRAPPC11-201ENST00000334690 STPG4Q8N801 248 aa13.61□□□□□ -0.23
TRAPPC11-201ENST00000334690 SLX1AQ9BQ83 275 aa13.61□□□□□ -0.23
TRAPPC11-201ENST00000334690 M0R2P5 195 aa13.61□□□□□ -0.23
TRAPPC11-201ENST00000334690 SIGMAR1Q99720 223 aa13.61□□□□□ -0.23
TRAPPC11-201ENST00000334690 COX11Q9Y6N1 276 aa13.61□□□□□ -0.23
TRAPPC11-201ENST00000334690 TMEM86BQ8N661 226 aa13.6□□□□□ -0.23
TRAPPC11-201ENST00000334690 CHAC1Q9BUX1 264 aa13.6□□□□□ -0.23
TRAPPC11-201ENST00000334690 COL4A3Q01955 1670 aa13.6□□□□□ -0.23
TRAPPC11-201ENST00000334690 C1orf122Q6ZSJ8 110 aa13.6□□□□□ -0.23
TRAPPC11-201ENST00000334690 PRADC1Q9BSG0 188 aa13.6□□□□□ -0.23
TRAPPC11-201ENST00000334690 INSP01308 110 aa13.6□□□□□ -0.23
TRAPPC11-201ENST00000334690 MALP21145 153 aa13.6□□□□□ -0.23
TRAPPC11-201ENST00000334690 SYNJ2BPP57105 145 aa13.6□□□□□ -0.23
TRAPPC11-201ENST00000334690 ZNF491Q8N8L2 437 aa13.6□□□□□ -0.23
TRAPPC11-201ENST00000334690 C1QTNF4Q9BXJ3 329 aa13.6□□□□□ -0.23
TRAPPC11-201ENST00000334690 CUL9Q8IWT3 2517 aa13.6□□□□□ -0.23
TRAPPC11-201ENST00000334690 TRGV1A0A0A0MS02 117 aa13.59□□□□□ -0.23
TRAPPC11-201ENST00000334690 SAP30O75446 220 aa13.59□□□□□ -0.23
TRAPPC11-201ENST00000334690 C8orf86Q6ZUL3 223 aa13.59□□□□□ -0.23
TRAPPC11-201ENST00000334690 Q8N8P6 123 aa13.59□□□□□ -0.23
TRAPPC11-201ENST00000334690 RUSC1-AS1Q66K80 236 aa13.59□□□□□ -0.23
TRAPPC11-201ENST00000334690 EML6Q6ZMW3 1958 aa13.59□□□□□ -0.23
TRAPPC11-201ENST00000334690 A0A087WWL8 130 aa13.59□□□□□ -0.23
TRAPPC11-201ENST00000334690 A0A0U1RRA0 63 aa13.59□□□□□ -0.23
TRAPPC11-201ENST00000334690 NDUFA4O00483 81 aa13.59□□□□□ -0.23
TRAPPC11-201ENST00000334690 MRPL51Q4U2R6 128 aaKnown RBP13.59□□□□□ -0.23
TRAPPC11-201ENST00000334690 CTSZQ9UBR2 303 aa13.59□□□□□ -0.23
TRAPPC11-201ENST00000334690 IGHV3-73A0A0B4J1V6 119 aa13.58□□□□□ -0.23
TRAPPC11-201ENST00000334690 LCNL1Q6ZST4 164 aa13.58□□□□□ -0.23
TRAPPC11-201ENST00000334690 DKK4Q9UBT3 224 aa13.58□□□□□ -0.23
TRAPPC11-201ENST00000334690 KLHL30-AS1Q8NEE0 82 aa13.58□□□□□ -0.24
TRAPPC11-201ENST00000334690 WT1P19544 449 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC11-201ENST00000334690 C2orf66Q6UXQ4 117 aa13.58□□□□□ -0.24
TRAPPC11-201ENST00000334690 TRPT1Q86TN4 253 aaKnown RBP13.58□□□□□ -0.24
TRAPPC11-201ENST00000334690 LY6G5BQ8NDX9 201 aa13.58□□□□□ -0.24
TRAPPC11-201ENST00000334690 DLX4Q92988 240 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC11-201ENST00000334690 ATXN8Q156A1 80 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 PRSS57Q6UWY2 283 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 TECTAO75443 2155 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 RASL10AQ92737 203 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 ZC2HC1AQ96GY0 325 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 PLA2G2EQ9NZK7 142 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 IGHV1-24A0A0C4DH33 117 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 RHODO00212 210 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 LGALS9BQ3B8N2 356 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 LGALS9CQ6DKI2 356 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 IGF2-ASQ6U949 168 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 C22orf46C9J442 243 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 K7EN84 100 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 ESDP10768 282 aa13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 KIF26AQ9ULI4 1882 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC11-201ENST00000334690 GAGE12BA1L429 117 aa13.56□□□□□ -0.24
TRAPPC11-201ENST00000334690 DEFB131AP59861 70 aa13.56□□□□□ -0.24
TRAPPC11-201ENST00000334690 DTX2Q86UW9 622 aa13.56□□□□□ -0.24
TRAPPC11-201ENST00000334690 LTAP01374 205 aa13.56□□□□□ -0.24
TRAPPC11-201ENST00000334690 IGLL1P15814 213 aa13.56□□□□□ -0.24
TRAPPC11-201ENST00000334690 A0A087WX48 190 aa13.56□□□□□ -0.24
TRAPPC11-201ENST00000334690 WIPF2Q8TF74 440 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC11-201ENST00000334690 SPRY4Q9C004 299 aa13.56□□□□□ -0.24
TRAPPC11-201ENST00000334690 KLF2Q9Y5W3 355 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC11-201ENST00000334690 SHISA9B4DS77 424 aa13.55□□□□□ -0.24
TRAPPC11-201ENST00000334690 NBL1P41271 181 aa13.55□□□□□ -0.24
TRAPPC11-201ENST00000334690 LINC00158P58513 81 aa13.55□□□□□ -0.24
TRAPPC11-201ENST00000334690 SLC25A20O43772 301 aa13.55□□□□□ -0.24
TRAPPC11-201ENST00000334690 DEFB104AQ8WTQ1 72 aa13.55□□□□□ -0.24
TRAPPC11-201ENST00000334690 CSPG4Q6UVK1 2322 aa13.54□□□□□ -0.24
TRAPPC11-201ENST00000334690 NSUN5P1Q3KNT7 163 aa13.54□□□□□ -0.24
TRAPPC11-201ENST00000334690 C1orf159Q96HA4 380 aa13.54□□□□□ -0.24
TRAPPC11-201ENST00000334690 TIMM21Q9BVV7 248 aa13.54□□□□□ -0.24
TRAPPC11-201ENST00000334690 SIGLEC8Q9NYZ4 499 aa13.54□□□□□ -0.24
TRAPPC11-201ENST00000334690 PGPEP1Q9NXJ5 209 aa13.54□□□□□ -0.24
TRAPPC11-201ENST00000334690 RIPPLY3P57055 190 aa13.54□□□□□ -0.24
TRAPPC11-201ENST00000334690 TMEM95Q3KNT9 176 aa13.54□□□□□ -0.24
TRAPPC11-201ENST00000334690 MYMXA0A1B0GTQ4 84 aa13.53□□□□□ -0.24
TRAPPC11-201ENST00000334690 TP53TG1Q9Y2A0 90 aa13.53□□□□□ -0.24
TRAPPC11-201ENST00000334690 COX8AP10176 69 aa13.52□□□□□ -0.24
TRAPPC11-201ENST00000334690 OR11H6Q8NGC7 330 aa13.52□□□□□ -0.24
TRAPPC11-201ENST00000334690 TMEM141Q96I45 108 aa13.52□□□□□ -0.24
TRAPPC11-201ENST00000334690 CRPP02741 224 aa13.52□□□□□ -0.25
TRAPPC11-201ENST00000334690 SSBP2P81877 361 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC11-201ENST00000334690 SPINK13Q1W4C9 94 aa13.51□□□□□ -0.25
TRAPPC11-201ENST00000334690 UBE2E2Q96LR5 201 aa13.51□□□□□ -0.25
TRAPPC11-201ENST00000334690 VGLL1Q99990 258 aa13.51□□□□□ -0.25
TRAPPC11-201ENST00000334690 SMIM2Q9BVW6 85 aa13.51□□□□□ -0.25
TRAPPC11-201ENST00000334690 NPYP01303 97 aa13.51□□□□□ -0.25
TRAPPC11-201ENST00000334690 ZNF106Q9H2Y7 1883 aaKnown RBP13.51□□□□□ -0.25
TRAPPC11-201ENST00000334690 C2orf16Q68DN1 1984 aa13.51□□□□□ -0.25
TRAPPC11-201ENST00000334690 TRAV8-4A0A0B4J246 113 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms