RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 Q8TAT8 98 aa13.42□□□□□ -0.26
DDX28-201ENST00000332395 VGLL1Q99990 258 aa13.42□□□□□ -0.26
DDX28-201ENST00000332395 LOC102724200A0A096LPH7 203 aaPredicted RBP13.42□□□□□ -0.26
DDX28-201ENST00000332395 H3BUX3 64 aa13.42□□□□□ -0.26
DDX28-201ENST00000332395 TRGV3P03979 118 aa13.42□□□□□ -0.26
DDX28-201ENST00000332395 FAM162BQ5T6X4 162 aa13.42□□□□□ -0.26
DDX28-201ENST00000332395 Q6AWC8 147 aa13.42□□□□□ -0.26
DDX28-201ENST00000332395 RNASEKQ6P5S7 137 aaKnown RBP13.42□□□□□ -0.26
DDX28-201ENST00000332395 METTL26Q96S19 204 aa13.42□□□□□ -0.26
DDX28-201ENST00000332395 ATP6V0BQ99437 205 aa13.42□□□□□ -0.26
DDX28-201ENST00000332395 HIF1ANQ9NWT6 349 aa13.42□□□□□ -0.26
DDX28-201ENST00000332395 CELSR2Q9HCU4 2923 aa13.41□□□□□ -0.26
DDX28-201ENST00000332395 IGHV3OR16-13A0A075B7E8 117 aa13.41□□□□□ -0.26
DDX28-201ENST00000332395 IGHV3-74A0A0B4J1X5 117 aa13.41□□□□□ -0.26
DDX28-201ENST00000332395 FAM181BA6NEQ2 426 aa13.41□□□□□ -0.26
DDX28-201ENST00000332395 B4DSR2 109 aa13.41□□□□□ -0.26
DDX28-201ENST00000332395 IGF1P05019 195 aa13.41□□□□□ -0.26
DDX28-201ENST00000332395 RIGQ13278 110 aa13.41□□□□□ -0.26
DDX28-201ENST00000332395 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.41□□□□□ -0.26
DDX28-201ENST00000332395 UTP20O75691 2785 aaKnown RBP13.41□□□□□ -0.26
DDX28-201ENST00000332395 MYO18BQ8IUG5 2567 aa13.41□□□□□ -0.26
DDX28-201ENST00000332395 A6NDX4 124 aa13.41□□□□□ -0.26
DDX28-201ENST00000332395 EBLN2Q6P2I7 272 aa13.41□□□□□ -0.26
DDX28-201ENST00000332395 USP24Q9UPU5 2620 aa13.41□□□□□ -0.26
DDX28-201ENST00000332395 CRYBG3Q68DQ2 2970 aa13.4□□□□□ -0.26
DDX28-201ENST00000332395 TMEM189A5PLL7 270 aa13.4□□□□□ -0.26
DDX28-201ENST00000332395 ZNF207O43670 478 aaKnown RBP13.4□□□□□ -0.26
DDX28-201ENST00000332395 CDKN1BP46527 198 aa13.4□□□□□ -0.26
DDX28-201ENST00000332395 DSCR9P59020 149 aa13.4□□□□□ -0.26
DDX28-201ENST00000332395 URB1-AS1Q96HZ7 61 aa13.4□□□□□ -0.26
DDX28-201ENST00000332395 SLC50A1Q9BRV3 221 aa13.4□□□□□ -0.26
DDX28-201ENST00000332395 NDFIP1Q9BT67 221 aa13.4□□□□□ -0.26
DDX28-201ENST00000332395 TPPP3Q9BW30 176 aa13.4□□□□□ -0.26
DDX28-201ENST00000332395 IGHV3-49A0A0A0MS15 119 aa13.39□□□□□ -0.27
DDX28-201ENST00000332395 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.39□□□□□ -0.27
DDX28-201ENST00000332395 IGHG2P01859 326 aa13.39□□□□□ -0.27
DDX28-201ENST00000332395 IGLL1P15814 213 aa13.39□□□□□ -0.27
DDX28-201ENST00000332395 RNF182Q8N6D2 247 aa13.39□□□□□ -0.27
DDX28-201ENST00000332395 TMSB15BA0A087X1C1 80 aa13.39□□□□□ -0.27
DDX28-201ENST00000332395 A0A1B0GW15 77 aa13.39□□□□□ -0.27
DDX28-201ENST00000332395 M0R2Z0 102 aa13.39□□□□□ -0.27
DDX28-201ENST00000332395 AVPP01185 164 aa13.39□□□□□ -0.27
DDX28-201ENST00000332395 GATD1Q8NB37 220 aa13.39□□□□□ -0.27
DDX28-201ENST00000332395 U3KQE9 123 aa13.39□□□□□ -0.27
DDX28-201ENST00000332395 C2orf70A6NJV1 201 aa13.38□□□□□ -0.27
DDX28-201ENST00000332395 PRAC2D3DTV9 90 aa13.38□□□□□ -0.27
DDX28-201ENST00000332395 MAP1AP78559 2803 aaPredicted RBP13.38□□□□□ -0.27
DDX28-201ENST00000332395 M0QZ24 198 aa13.38□□□□□ -0.27
DDX28-201ENST00000332395 ZNF80P51504 273 aaPredicted RBP13.38□□□□□ -0.27
DDX28-201ENST00000332395 BBC3Q96PG8 261 aaPredicted RBP13.38□□□□□ -0.27
DDX28-201ENST00000332395 PPIFP30405 207 aaKnown RBP13.37□□□□□ -0.27
DDX28-201ENST00000332395 ARL3P36405 182 aa13.37□□□□□ -0.27
DDX28-201ENST00000332395 BMI1P35226 326 aa13.37□□□□□ -0.27
DDX28-201ENST00000332395 BLCAPP62952 87 aa13.37□□□□□ -0.27
DDX28-201ENST00000332395 ERCC8Q13216 396 aa13.37□□□□□ -0.27
DDX28-201ENST00000332395 LYZL1Q6UWQ5 148 aa13.37□□□□□ -0.27
DDX28-201ENST00000332395 RBAKDNA6NC62 111 aa13.36□□□□□ -0.27
DDX28-201ENST00000332395 SLC25A16P16260 332 aa13.36□□□□□ -0.27
DDX28-201ENST00000332395 GATA3P23771 443 aa13.36□□□□□ -0.27
DDX28-201ENST00000332395 COTL1Q14019 142 aa13.36□□□□□ -0.27
DDX28-201ENST00000332395 CHCHD1Q96BP2 118 aaKnown RBP13.36□□□□□ -0.27
DDX28-201ENST00000332395 CSMD2Q7Z408 3487 aa13.35□□□□□ -0.27
DDX28-201ENST00000332395 TRAV8-2A0A0B4J237 113 aa13.35□□□□□ -0.27
DDX28-201ENST00000332395 H3BUA1 57 aa13.35□□□□□ -0.27
DDX28-201ENST00000332395 BRI3O95415 125 aa13.35□□□□□ -0.27
DDX28-201ENST00000332395 TRBV12-3P01733 135 aa13.35□□□□□ -0.27
DDX28-201ENST00000332395 C8orf86Q6ZUL3 223 aa13.35□□□□□ -0.27
DDX28-201ENST00000332395 SPATA12Q7Z6I5 190 aa13.35□□□□□ -0.27
DDX28-201ENST00000332395 Q6ZS46 218 aa13.35□□□□□ -0.27
DDX28-201ENST00000332395 OR4C5Q8NGB2 326 aa13.35□□□□□ -0.27
DDX28-201ENST00000332395 ZFYVE26Q68DK2 2539 aa13.35□□□□□ -0.27
DDX28-201ENST00000332395 ZNF493Q6ZR52 646 aa13.34□□□□□ -0.27
DDX28-201ENST00000332395 USMG5Q96IX5 58 aa13.34□□□□□ -0.27
DDX28-201ENST00000332395 COX6B1P14854 86 aa13.34□□□□□ -0.27
DDX28-201ENST00000332395 RPS20P60866 119 aaKnown RBP13.34□□□□□ -0.27
DDX28-201ENST00000332395 ZNF462Q96JM2 2506 aa13.34□□□□□ -0.27
DDX28-201ENST00000332395 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.33□□□□□ -0.27
DDX28-201ENST00000332395 UNQ9165/PRO28630Q6UXU0 137 aa13.33□□□□□ -0.28
DDX28-201ENST00000332395 LINC01356Q8N9X3 169 aa13.33□□□□□ -0.28
DDX28-201ENST00000332395 GLMPQ8WWB7 406 aa13.33□□□□□ -0.28
DDX28-201ENST00000332395 MRPL53Q96EL3 112 aaKnown RBP13.33□□□□□ -0.28
DDX28-201ENST00000332395 TMEM70Q9BUB7 260 aa13.33□□□□□ -0.28
DDX28-201ENST00000332395 KLK15Q9H2R5 256 aa13.33□□□□□ -0.28
DDX28-201ENST00000332395 IGHV1-24A0A0C4DH33 117 aa13.32□□□□□ -0.28
DDX28-201ENST00000332395 TMEM213A2RRL7 107 aa13.32□□□□□ -0.28
DDX28-201ENST00000332395 NDUFA4O00483 81 aa13.32□□□□□ -0.28
DDX28-201ENST00000332395 PF4V1P10720 104 aa13.32□□□□□ -0.28
DDX28-201ENST00000332395 IL17RELQ6ZVW7 336 aa13.32□□□□□ -0.28
DDX28-201ENST00000332395 A0A096LNT2 108 aa13.32□□□□□ -0.28
DDX28-201ENST00000332395 FABP5P3A8MUU1 101 aa13.32□□□□□ -0.28
DDX28-201ENST00000332395 IGHV3-11P01762 117 aa13.32□□□□□ -0.28
DDX28-201ENST00000332395 SRSF2Q01130 221 aaKnown RBP13.32□□□□□ -0.28
DDX28-201ENST00000332395 ZNF843Q8N446 348 aa13.32□□□□□ -0.28
DDX28-201ENST00000332395 FER1L6-AS1Q8NA97 138 aa13.32□□□□□ -0.28
DDX28-201ENST00000332395 AGPAT4-IT1Q9H0P7 198 aa13.32□□□□□ -0.28
DDX28-201ENST00000332395 ST20Q9HBF5 79 aa13.32□□□□□ -0.28
DDX28-201ENST00000332395 CRXO43186 299 aaPredicted RBP13.31□□□□□ -0.28
DDX28-201ENST00000332395 ORM1P02763 201 aa13.31□□□□□ -0.28
DDX28-201ENST00000332395 IGLC6P0CF74 106 aa13.31□□□□□ -0.28
DDX28-201ENST00000332395 ZNF138P52744 262 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms