RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 EMP1P54849 157 aa13.12□□□□□ -0.31
SFXN1-201ENST00000321442 IGLC7A0M8Q6 106 aa13.12□□□□□ -0.31
SFXN1-201ENST00000321442 HOXA3O43365 443 aaPredicted RBP13.12□□□□□ -0.31
SFXN1-201ENST00000321442 C17orf77Q96MU5 243 aa13.12□□□□□ -0.31
SFXN1-201ENST00000321442 IGHV3OR16-12A0A075B7B8 117 aa13.12□□□□□ -0.31
SFXN1-201ENST00000321442 NDPQ00604 133 aa13.12□□□□□ -0.31
SFXN1-201ENST00000321442 C7orf69Q9H7B7 122 aa13.12□□□□□ -0.31
SFXN1-201ENST00000321442 TRAV40A0A0B4J280 105 aa13.11□□□□□ -0.31
SFXN1-201ENST00000321442 ESDP10768 282 aa13.11□□□□□ -0.31
SFXN1-201ENST00000321442 ERCC8Q13216 396 aa13.11□□□□□ -0.31
SFXN1-201ENST00000321442 BUB1B-PAK6H3BSN5 160 aa13.11□□□□□ -0.31
SFXN1-201ENST00000321442 CRXO43186 299 aaPredicted RBP13.11□□□□□ -0.31
SFXN1-201ENST00000321442 PSMG4Q5JS54 123 aa13.11□□□□□ -0.31
SFXN1-201ENST00000321442 BRD3OSQ6XYD6 125 aa13.11□□□□□ -0.31
SFXN1-201ENST00000321442 HCFC1P51610 2035 aa13.11□□□□□ -0.31
SFXN1-201ENST00000321442 IGHV3-64A0A075B6Q5 118 aa13.11□□□□□ -0.31
SFXN1-201ENST00000321442 K7EP13 123 aa13.11□□□□□ -0.31
SFXN1-201ENST00000321442 PROP1O75360 226 aa13.11□□□□□ -0.31
SFXN1-201ENST00000321442 ETDBQ3ZM63 59 aa13.11□□□□□ -0.31
SFXN1-201ENST00000321442 HAX1O00165 279 aa13.1□□□□□ -0.31
SFXN1-201ENST00000321442 CHAC1Q9BUX1 264 aa13.1□□□□□ -0.31
SFXN1-201ENST00000321442 CHTOPQ9Y3Y2 248 aaKnown RBP13.1□□□□□ -0.31
SFXN1-201ENST00000321442 THBDP07204 575 aa13.1□□□□□ -0.31
SFXN1-201ENST00000321442 BRWD1-AS2P59051 145 aa13.1□□□□□ -0.31
SFXN1-201ENST00000321442 CEACAM4O75871 244 aa13.1□□□□□ -0.31
SFXN1-201ENST00000321442 COX8AP10176 69 aa13.1□□□□□ -0.31
SFXN1-201ENST00000321442 C22orf34Q6ZV56 151 aa13.1□□□□□ -0.31
SFXN1-201ENST00000321442 SHANK2-AS3Q9BTD1 123 aa13.1□□□□□ -0.31
SFXN1-201ENST00000321442 PAX2Q02962 417 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 FAM104BQ5XKR9 115 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 ADAMTSL5Q6ZMM2 481 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 GFRA4Q9GZZ7 299 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 ZNF492Q9P255 531 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 ZNF292O60281 2723 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 TNFRSF14Q92956 283 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 PIMREGQ9BSJ6 248 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 SIGLEC8Q9NYZ4 499 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 PRRC2AP48634 2157 aaKnown RBP13.09□□□□□ -0.31
SFXN1-201ENST00000321442 PSMB11A5LHX3 300 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 LAGE3Q14657 143 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 TMEM219Q86XT9 240 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 TMEM75Q8N9X5 138 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 TRBV19A0A075B6N1 114 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 TRAV8-2A0A0B4J237 113 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 CT83Q5H943 113 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 SYT8Q8NBV8 401 aa13.09□□□□□ -0.31
SFXN1-201ENST00000321442 C5orf64Q2M2E5 130 aa13.08□□□□□ -0.32
SFXN1-201ENST00000321442 SLC50A1Q9BRV3 221 aa13.08□□□□□ -0.32
SFXN1-201ENST00000321442 TP73-AS1Q9UF72 201 aa13.08□□□□□ -0.32
SFXN1-201ENST00000321442 TNFRSF6BO95407 300 aa13.08□□□□□ -0.32
SFXN1-201ENST00000321442 BPESC1Q9GZL8 116 aa13.08□□□□□ -0.32
SFXN1-201ENST00000321442 FAM106AQ4KMX7 169 aa13.08□□□□□ -0.32
SFXN1-201ENST00000321442 BOD1L1Q8NFC6 3051 aa13.08□□□□□ -0.32
SFXN1-201ENST00000321442 CD7P09564 240 aa13.07□□□□□ -0.32
SFXN1-201ENST00000321442 MRPL51Q4U2R6 128 aaKnown RBP13.07□□□□□ -0.32
SFXN1-201ENST00000321442 PATE2Q6UY27 113 aa13.07□□□□□ -0.32
SFXN1-201ENST00000321442 ZNF833PQ6ZTB9 187 aa13.07□□□□□ -0.32
SFXN1-201ENST00000321442 C14orf178Q8N769 122 aaPredicted RBP13.07□□□□□ -0.32
SFXN1-201ENST00000321442 C11orf44Q8N8P7 122 aa13.07□□□□□ -0.32
SFXN1-201ENST00000321442 POU2AF1Q16633 256 aa13.07□□□□□ -0.32
SFXN1-201ENST00000321442 FAM120AOSQ5T036 256 aa13.07□□□□□ -0.32
SFXN1-201ENST00000321442 RNF182Q8N6D2 247 aa13.07□□□□□ -0.32
SFXN1-201ENST00000321442 TMEM8BA6NDV4 472 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 NPYP01303 97 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 IGLV1-44P01699 117 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 UTF1Q5T230 341 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 GEMIN7Q9H840 131 aaKnown RBP13.06□□□□□ -0.32
SFXN1-201ENST00000321442 C9orf118A6NHY6 69 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 NPIPB6E9PJ23 425 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 ZNF747Q9BV97 191 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 DKK2Q9UBU2 259 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 TRAV2A0A0B4J234 112 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 IGHV2-70DA0A0C4DH43 119 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 SNCGO76070 127 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 MSMPQ1L6U9 139 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 PCP2Q8IVA1 136 aa13.06□□□□□ -0.32
SFXN1-201ENST00000321442 K7ERJ3 54 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 AMTNQ6UX39 209 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 SAP30O75446 220 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 LOXP28300 417 aaPredicted RBP13.05□□□□□ -0.32
SFXN1-201ENST00000321442 ORMDL2Q53FV1 153 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 IGFL2Q6UWQ7 119 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 LYPD1Q8N2G4 141 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 KIAA1549Q9HCM3 1950 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 IGKV3D-20A0A0C4DH25 116 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 IGKV3OR2-268A0A0C4DH90 116 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 IGLC1P0CG04 106 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 TMEM155Q4W5P6 130 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 E7EUB6 86 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 H3BRM9 83 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 DEFB125Q8N687 156 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 NEU4Q8WWR8 484 aaPredicted RBP13.05□□□□□ -0.32
SFXN1-201ENST00000321442 FAM167A-AS1Q96KT0 104 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 PGPEP1Q9NXJ5 209 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 SMPXQ9UHP9 88 aa13.05□□□□□ -0.32
SFXN1-201ENST00000321442 GATA4P43694 442 aa13.04□□□□□ -0.32
SFXN1-201ENST00000321442 Q8NA96 180 aa13.04□□□□□ -0.32
SFXN1-201ENST00000321442 IGLV3-9A0A075B6K5 115 aa13.04□□□□□ -0.32
SFXN1-201ENST00000321442 A0A0U1RRA0 63 aa13.04□□□□□ -0.32
SFXN1-201ENST00000321442 IGHV4-39P01824 125 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms