RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CRIP1P50238 77 aa13.53□□□□□ -0.24
RAB39A-201ENST00000320578 SNRPEP62304 92 aaKnown RBP13.53□□□□□ -0.24
RAB39A-201ENST00000320578 TCTEX1D4Q5JR98 221 aa13.53□□□□□ -0.24
RAB39A-201ENST00000320578 NUP35Q8NFH5 326 aa13.53□□□□□ -0.24
RAB39A-201ENST00000320578 NEU1Q99519 415 aa13.53□□□□□ -0.24
RAB39A-201ENST00000320578 LENEPQ9Y5L5 61 aa13.53□□□□□ -0.24
RAB39A-201ENST00000320578 OVOL1O14753 267 aa13.53□□□□□ -0.24
RAB39A-201ENST00000320578 SRSF2Q01130 221 aaKnown RBP13.53□□□□□ -0.24
RAB39A-201ENST00000320578 TCL1AP56279 114 aa13.52□□□□□ -0.25
RAB39A-201ENST00000320578 FABP9Q0Z7S8 132 aa13.52□□□□□ -0.25
RAB39A-201ENST00000320578 SMUG1Q53HV7 270 aa13.52□□□□□ -0.25
RAB39A-201ENST00000320578 FAM162BQ5T6X4 162 aa13.52□□□□□ -0.25
RAB39A-201ENST00000320578 TCF24Q7RTU0 167 aa13.52□□□□□ -0.25
RAB39A-201ENST00000320578 C8orf49Q96NF6 230 aa13.52□□□□□ -0.25
RAB39A-201ENST00000320578 HIGD1CA8MV81 97 aa13.51□□□□□ -0.25
RAB39A-201ENST00000320578 LINC01619G3V211 115 aa13.51□□□□□ -0.25
RAB39A-201ENST00000320578 NDUFA7O95182 113 aa13.51□□□□□ -0.25
RAB39A-201ENST00000320578 HOXA5P20719 270 aa13.51□□□□□ -0.25
RAB39A-201ENST00000320578 ZNF138P52744 262 aa13.51□□□□□ -0.25
RAB39A-201ENST00000320578 OR2D3Q8NGH3 330 aa13.51□□□□□ -0.25
RAB39A-201ENST00000320578 AGPAT4-IT1Q9H0P7 198 aa13.51□□□□□ -0.25
RAB39A-201ENST00000320578 SONP18583 2426 aaKnown RBP13.51□□□□□ -0.25
RAB39A-201ENST00000320578 SYNJ2BPP57105 145 aa13.5□□□□□ -0.25
RAB39A-201ENST00000320578 COA6Q5JTJ3 125 aaKnown RBP13.5□□□□□ -0.25
RAB39A-201ENST00000320578 TMEM78Q5T7P6 136 aa13.5□□□□□ -0.25
RAB39A-201ENST00000320578 RBPMS2Q6ZRY4 209 aaKnown RBP13.5□□□□□ -0.25
RAB39A-201ENST00000320578 LINC00477Q96M19 166 aa13.5□□□□□ -0.25
RAB39A-201ENST00000320578 ID1P41134 155 aa13.5□□□□□ -0.25
RAB39A-201ENST00000320578 Q6AWC8 147 aa13.5□□□□□ -0.25
RAB39A-201ENST00000320578 Q71RC1 249 aaPredicted RBP13.5□□□□□ -0.25
RAB39A-201ENST00000320578 C20orf173Q96LM9 149 aa13.5□□□□□ -0.25
RAB39A-201ENST00000320578 ACANP16112 2415 aa13.5□□□□□ -0.25
RAB39A-201ENST00000320578 TRBV7-9A0A0J9YWB2 115 aa13.49□□□□□ -0.25
RAB39A-201ENST00000320578 XKRY2A2RUG3 117 aa13.49□□□□□ -0.25
RAB39A-201ENST00000320578 HLA-DQA1P01909 254 aa13.49□□□□□ -0.25
RAB39A-201ENST00000320578 NDUFA6P56556 154 aa13.49□□□□□ -0.25
RAB39A-201ENST00000320578 RPS20P60866 119 aaKnown RBP13.49□□□□□ -0.25
RAB39A-201ENST00000320578 RPL11P62913 178 aaKnown RBP13.49□□□□□ -0.25
RAB39A-201ENST00000320578 ERCC8Q13216 396 aa13.49□□□□□ -0.25
RAB39A-201ENST00000320578 TMEM136Q6ZRR5 245 aa13.49□□□□□ -0.25
RAB39A-201ENST00000320578 ZNF738Q8NE65 137 aa13.49□□□□□ -0.25
RAB39A-201ENST00000320578 OR1N2Q8NGR9 330 aa13.49□□□□□ -0.25
RAB39A-201ENST00000320578 GTSF1Q8WW33 167 aa13.49□□□□□ -0.25
RAB39A-201ENST00000320578 SMR3AQ99954 134 aa13.49□□□□□ -0.25
RAB39A-201ENST00000320578 ANK3Q12955 4377 aaKnown RBP13.49□□□□□ -0.25
RAB39A-201ENST00000320578 MYO9AB2RTY4 2548 aa13.49□□□□□ -0.25
RAB39A-201ENST00000320578 A0A1B0GXF2 115 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 C2orf70A6NJV1 201 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 SH2D1AO60880 128 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 CBLN1P23435 193 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 LINC01006Q8NI28 216 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 Q8TAT8 98 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 DCANP1Q8TF63 244 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 DPF1Q92782 380 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 ASCL2Q99929 193 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 FABP5P3A8MUU1 101 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 SNURFLB1AK76 121 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 M0QZ24 198 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 GPR61Q9BZJ8 451 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 MRPL18Q9H0U6 180 aaKnown RBP13.48□□□□□ -0.25
RAB39A-201ENST00000320578 PEMTQ9UBM1 199 aa13.48□□□□□ -0.25
RAB39A-201ENST00000320578 C18orf65Q6ZTR6 163 aa13.47□□□□□ -0.25
RAB39A-201ENST00000320578 OR11H1Q8NG94 326 aa13.47□□□□□ -0.25
RAB39A-201ENST00000320578 OR10J6PQ8NGY7 276 aa13.47□□□□□ -0.25
RAB39A-201ENST00000320578 MRPL54Q6P161 138 aaKnown RBP13.46□□□□□ -0.25
RAB39A-201ENST00000320578 TMEM189A5PLL7 270 aa13.46□□□□□ -0.26
RAB39A-201ENST00000320578 EDN2P20800 178 aa13.46□□□□□ -0.26
RAB39A-201ENST00000320578 HIST1H1AQ02539 215 aaPredicted RBP13.46□□□□□ -0.26
RAB39A-201ENST00000320578 KLHL30-AS1Q8NEE0 82 aa13.46□□□□□ -0.26
RAB39A-201ENST00000320578 A0A1B0GW15 77 aa13.45□□□□□ -0.26
RAB39A-201ENST00000320578 SPINK4O60575 86 aa13.45□□□□□ -0.26
RAB39A-201ENST00000320578 FRMD6-AS1P0C7T7 363 aa13.45□□□□□ -0.26
RAB39A-201ENST00000320578 PRB4P10163 310 aaPredicted RBP13.45□□□□□ -0.26
RAB39A-201ENST00000320578 ZNF80P51504 273 aaPredicted RBP13.45□□□□□ -0.26
RAB39A-201ENST00000320578 HBBP68871 147 aa13.45□□□□□ -0.26
RAB39A-201ENST00000320578 MS4A6AQ9H2W1 248 aa13.45□□□□□ -0.26
RAB39A-201ENST00000320578 TRAV2A0A0B4J234 112 aa13.44□□□□□ -0.26
RAB39A-201ENST00000320578 K7EQG2 157 aa13.44□□□□□ -0.26
RAB39A-201ENST00000320578 HAX1O00165 279 aa13.44□□□□□ -0.26
RAB39A-201ENST00000320578 SLURP1P55000 103 aa13.44□□□□□ -0.26
RAB39A-201ENST00000320578 OR8A1Q8NGG7 326 aa13.44□□□□□ -0.26
RAB39A-201ENST00000320578 HIVEP2P31629 2446 aa13.44□□□□□ -0.26
RAB39A-201ENST00000320578 FHL3Q13643 280 aa13.43□□□□□ -0.26
RAB39A-201ENST00000320578 LINC01559Q495D7 138 aa13.43□□□□□ -0.26
RAB39A-201ENST00000320578 OR9G4Q8NGQ1 327 aa13.43□□□□□ -0.26
RAB39A-201ENST00000320578 PGLYRP4Q96LB8 373 aa13.43□□□□□ -0.26
RAB39A-201ENST00000320578 FAM19A4Q96LR4 140 aa13.43□□□□□ -0.26
RAB39A-201ENST00000320578 TSSC4Q9Y5U2 329 aaPredicted RBP13.43□□□□□ -0.26
RAB39A-201ENST00000320578 DEFB136Q30KP8 78 aa13.43□□□□□ -0.26
RAB39A-201ENST00000320578 KHDC1LQ5JSQ8 128 aa13.43□□□□□ -0.26
RAB39A-201ENST00000320578 GATD1Q8NB37 220 aa13.43□□□□□ -0.26
RAB39A-201ENST00000320578 S100A8P05109 93 aa13.42□□□□□ -0.26
RAB39A-201ENST00000320578 SNRPD3P62318 126 aaKnown RBP13.42□□□□□ -0.26
RAB39A-201ENST00000320578 PAFAH1B2P68402 229 aa13.42□□□□□ -0.26
RAB39A-201ENST00000320578 RIGQ13278 110 aa13.42□□□□□ -0.26
RAB39A-201ENST00000320578 ADAMTSL5Q6ZMM2 481 aa13.42□□□□□ -0.26
RAB39A-201ENST00000320578 APRG1Q8IVJ8 170 aa13.42□□□□□ -0.26
RAB39A-201ENST00000320578 A0A1B0GUT8 65 aa13.41□□□□□ -0.26
RAB39A-201ENST00000320578 APCSP02743 223 aa13.41□□□□□ -0.26
RAB39A-201ENST00000320578 GZMBP10144 247 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms