RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 LEPP41159 167 aa13.9□□□□□ -0.18
PDZRN3-202ENST00000308537 ICAM4Q14773 271 aa13.9□□□□□ -0.18
PDZRN3-202ENST00000308537 Q6ZR54 194 aa13.9□□□□□ -0.18
PDZRN3-202ENST00000308537 INO80EQ8NBZ0 244 aaPredicted RBP13.9□□□□□ -0.18
PDZRN3-202ENST00000308537 PHYHIPLQ96FC7 376 aa13.9□□□□□ -0.18
PDZRN3-202ENST00000308537 SMIM3Q9BZL3 60 aa13.9□□□□□ -0.18
PDZRN3-202ENST00000308537 IGKV2-40A0A087WW87 121 aaPredicted RBP13.89□□□□□ -0.19
PDZRN3-202ENST00000308537 CBY3A6NI87 242 aa13.89□□□□□ -0.19
PDZRN3-202ENST00000308537 IGKV2D-40P01614 121 aaPredicted RBP13.89□□□□□ -0.19
PDZRN3-202ENST00000308537 OR10J4P0C629 311 aa13.89□□□□□ -0.19
PDZRN3-202ENST00000308537 CRISP2P16562 243 aa13.89□□□□□ -0.19
PDZRN3-202ENST00000308537 CD300CQ08708 224 aa13.89□□□□□ -0.19
PDZRN3-202ENST00000308537 ZNF266Q14584 549 aa13.89□□□□□ -0.19
PDZRN3-202ENST00000308537 PRR9Q5T870 116 aa13.89□□□□□ -0.19
PDZRN3-202ENST00000308537 ZFAND2AQ8N6M9 145 aa13.89□□□□□ -0.19
PDZRN3-202ENST00000308537 VGLL1Q99990 258 aa13.89□□□□□ -0.19
PDZRN3-202ENST00000308537 TIMM9Q9Y5J7 89 aa13.89□□□□□ -0.19
PDZRN3-202ENST00000308537 HERC2O95714 4834 aa13.89□□□□□ -0.19
PDZRN3-202ENST00000308537 RTL8CO15255 209 aa13.88□□□□□ -0.19
PDZRN3-202ENST00000308537 SLC25A5P05141 298 aaKnown RBP13.88□□□□□ -0.19
PDZRN3-202ENST00000308537 RNF212Q495C1 297 aa13.88□□□□□ -0.19
PDZRN3-202ENST00000308537 Q6ZQT7 251 aa13.88□□□□□ -0.19
PDZRN3-202ENST00000308537 C11orf72Q8NBR9 251 aa13.88□□□□□ -0.19
PDZRN3-202ENST00000308537 RNF141Q8WVD5 230 aa13.88□□□□□ -0.19
PDZRN3-202ENST00000308537 LINC00477Q96M19 166 aa13.88□□□□□ -0.19
PDZRN3-202ENST00000308537 PAXXQ9BUH6 204 aa13.88□□□□□ -0.19
PDZRN3-202ENST00000308537 MUC4Q99102 2169 aa13.88□□□□□ -0.19
PDZRN3-202ENST00000308537 A0A1B0GVY2 172 aa13.87□□□□□ -0.19
PDZRN3-202ENST00000308537 EIF3GO75821 320 aaKnown RBP eCLIP13.87□□□□□ -0.19
PDZRN3-202ENST00000308537 ATP5G1P05496 136 aa13.87□□□□□ -0.19
PDZRN3-202ENST00000308537 ATP5G3P48201 142 aa13.87□□□□□ -0.19
PDZRN3-202ENST00000308537 BTN1A1Q13410 526 aa13.87□□□□□ -0.19
PDZRN3-202ENST00000308537 LGALS9BQ3B8N2 356 aa13.87□□□□□ -0.19
PDZRN3-202ENST00000308537 C15orf53Q8NAA6 179 aa13.87□□□□□ -0.19
PDZRN3-202ENST00000308537 AQP10Q96PS8 301 aa13.87□□□□□ -0.19
PDZRN3-202ENST00000308537 PYGO2Q9BRQ0 406 aa13.87□□□□□ -0.19
PDZRN3-202ENST00000308537 LINC00467Q9BRT7 94 aa13.87□□□□□ -0.19
PDZRN3-202ENST00000308537 C7orf71A4D174 169 aa13.86□□□□□ -0.19
PDZRN3-202ENST00000308537 FFAR4Q5NUL3 377 aa13.86□□□□□ -0.19
PDZRN3-202ENST00000308537 FAM122CQ6P4D5 195 aa13.86□□□□□ -0.19
PDZRN3-202ENST00000308537 OR2T35Q8NGX2 323 aa13.86□□□□□ -0.19
PDZRN3-202ENST00000308537 F5H768 121 aa13.85□□□□□ -0.19
PDZRN3-202ENST00000308537 M0R2N4 97 aa13.85□□□□□ -0.19
PDZRN3-202ENST00000308537 AAMDCQ9H7C9 122 aa13.85□□□□□ -0.19
PDZRN3-202ENST00000308537 ZNF492Q9P255 531 aa13.85□□□□□ -0.19
PDZRN3-202ENST00000308537 FXYD6-FXYD2A0A087WZ82 144 aa13.84□□□□□ -0.19
PDZRN3-202ENST00000308537 NMBP08949 121 aa13.84□□□□□ -0.19
PDZRN3-202ENST00000308537 HOXA5P20719 270 aa13.84□□□□□ -0.19
PDZRN3-202ENST00000308537 TAS2R45P59539 299 aa13.84□□□□□ -0.19
PDZRN3-202ENST00000308537 DAZ2Q13117 558 aaKnown RBP13.84□□□□□ -0.19
PDZRN3-202ENST00000308537 ACOT6Q3I5F7 207 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-202ENST00000308537 KIAA1109Q2LD37 5005 aa13.84□□□□□ -0.19
PDZRN3-202ENST00000308537 IGLV2-18A0A075B6J9 118 aa13.83□□□□□ -0.2
PDZRN3-202ENST00000308537 OR7C2O60412 319 aa13.83□□□□□ -0.2
PDZRN3-202ENST00000308537 Q5BKY6 102 aa13.83□□□□□ -0.2
PDZRN3-202ENST00000308537 RANP62826 216 aaKnown RBP13.82□□□□□ -0.2
PDZRN3-202ENST00000308537 ANXA2RQ3ZCQ2 193 aa13.82□□□□□ -0.2
PDZRN3-202ENST00000308537 Q6ZTI0 123 aa13.82□□□□□ -0.2
PDZRN3-202ENST00000308537 LINC00336Q6ZUF6 198 aa13.82□□□□□ -0.2
PDZRN3-202ENST00000308537 UBE2DNLQ8IWF7 75 aa13.82□□□□□ -0.2
PDZRN3-202ENST00000308537 CCDC28AQ8IWP9 274 aa13.82□□□□□ -0.2
PDZRN3-202ENST00000308537 LYPD1Q8N2G4 141 aa13.82□□□□□ -0.2
PDZRN3-202ENST00000308537 Q8TAT8 98 aa13.82□□□□□ -0.2
PDZRN3-202ENST00000308537 Q9H3A6 140 aa13.82□□□□□ -0.2
PDZRN3-202ENST00000308537 GSN-AS1Q9NRJ2 163 aa13.82□□□□□ -0.2
PDZRN3-202ENST00000308537 BORCS7-ASMTA0A0B4J1R7 106 aa13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 TRBV7-9A0A0J9YWB2 115 aa13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 A0A1W2PPV4 95 aa13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 GAGE12BA1L429 117 aa13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 GAGE7O76087 117 aa13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 GAGE12FP0CL80 117 aa13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 GAGE12GP0CL81 117 aa13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 GAGE12IP0CL82 117 aa13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 RNASE4P34096 147 aaKnown RBP13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 RAB2AP61019 212 aa13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 UBE2L3P68036 154 aaKnown RBP13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 ZNRF2Q8NHG8 242 aa13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 C18orf15Q96N68 181 aa13.81□□□□□ -0.2
PDZRN3-202ENST00000308537 RBAKDNA6NC62 111 aa13.8□□□□□ -0.2
PDZRN3-202ENST00000308537 SNURFLB1AK76 121 aa13.8□□□□□ -0.2
PDZRN3-202ENST00000308537 M6PRP20645 277 aa13.8□□□□□ -0.2
PDZRN3-202ENST00000308537 ZNF138P52744 262 aa13.8□□□□□ -0.2
PDZRN3-202ENST00000308537 KHDC3LQ587J8 217 aa13.8□□□□□ -0.2
PDZRN3-202ENST00000308537 TMEM78Q5T7P6 136 aa13.8□□□□□ -0.2
PDZRN3-202ENST00000308537 EIF4E3Q8N5X7 224 aaKnown RBP13.8□□□□□ -0.2
PDZRN3-202ENST00000308537 TP53TG3Q9ULZ0 132 aa13.8□□□□□ -0.2
PDZRN3-202ENST00000308537 TNFSF18Q9UNG2 199 aa13.8□□□□□ -0.2
PDZRN3-202ENST00000308537 MBP02144 154 aa13.79□□□□□ -0.2
PDZRN3-202ENST00000308537 GPX1P07203 203 aa13.79□□□□□ -0.2
PDZRN3-202ENST00000308537 FAM3BP58499 235 aaPredicted RBP13.79□□□□□ -0.2
PDZRN3-202ENST00000308537 PSMG3Q9BT73 122 aaPredicted RBP13.79□□□□□ -0.2
PDZRN3-202ENST00000308537 TMPRSS5Q9H3S3 457 aa13.79□□□□□ -0.2
PDZRN3-202ENST00000308537 LINC00588Q9Y4M8 146 aa13.79□□□□□ -0.2
PDZRN3-202ENST00000308537 KLF12Q9Y4X4 402 aa13.79□□□□□ -0.2
PDZRN3-202ENST00000308537 TRAV26-1A0A087WT03 109 aa13.78□□□□□ -0.2
PDZRN3-202ENST00000308537 DIRC3C9JPN6 131 aa13.78□□□□□ -0.2
PDZRN3-202ENST00000308537 TAAR5O14804 337 aa13.78□□□□□ -0.2
PDZRN3-202ENST00000308537 NUDT3O95989 172 aa13.78□□□□□ -0.2
PDZRN3-202ENST00000308537 TCL1AP56279 114 aa13.78□□□□□ -0.2
PDZRN3-202ENST00000308537 SERF2P84101 59 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms