RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 C18orf32Q8TCD1 76 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 IGF2BP2-AS1Q96M15 143 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 SIPA1L1O43166 1804 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 RNASE2P10153 161 aaKnown RBP10.17□□□□□ -0.78
USP38-201ENST00000307017 Q9HAA7 133 aa10.17□□□□□ -0.78
USP38-201ENST00000307017 CRYBA4P53673 196 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 SH2D6Q7Z4S9 175 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 DAND5Q8N907 189 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 BOD1L2Q8IYS8 172 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 APC2O95996 2303 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 TNS1Q9HBL0 1735 aaKnown RBP10.16□□□□□ -0.78
USP38-201ENST00000307017 XCL1P47992 114 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 TANC2Q9HCD6 1990 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 B5MCH6 92 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 GNRH2O43555 120 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 ZNF561-AS1K7EIQ3 104 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 NDUFB8O95169 186 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 DEFB136Q30KP8 78 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 LHFPL1Q86WI0 220 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 TICRRQ7Z2Z1 1910 aa10.16□□□□□ -0.78
USP38-201ENST00000307017 TMEM30BQ3MIR4 351 aa10.15□□□□□ -0.78
USP38-201ENST00000307017 TRACP01848 142 aa10.15□□□□□ -0.78
USP38-201ENST00000307017 CEND1Q8N111 149 aa10.15□□□□□ -0.78
USP38-201ENST00000307017 CARD19Q96LW7 228 aa10.15□□□□□ -0.78
USP38-201ENST00000307017 C5orf64Q2M2E5 130 aa10.15□□□□□ -0.78
USP38-201ENST00000307017 TRGV9Q99603 122 aa10.15□□□□□ -0.78
USP38-201ENST00000307017 UBE2BP63146 152 aa10.15□□□□□ -0.78
USP38-201ENST00000307017 IGHG3P01860 377 aa10.15□□□□□ -0.79
USP38-201ENST00000307017 C9orf118A6NHY6 69 aa10.15□□□□□ -0.79
USP38-201ENST00000307017 TCTEX1D4Q5JR98 221 aa10.15□□□□□ -0.79
USP38-201ENST00000307017 IGLV10-54A0A075B6I4 117 aa10.14□□□□□ -0.79
USP38-201ENST00000307017 IGKV1-6A0A0C4DH72 117 aa10.14□□□□□ -0.79
USP38-201ENST00000307017 MRPL35Q9NZE8 188 aaKnown RBP10.14□□□□□ -0.79
USP38-201ENST00000307017 SOCS3O14543 225 aa10.14□□□□□ -0.79
USP38-201ENST00000307017 IGKV3D-7A0A0C4DH55 119 aa10.14□□□□□ -0.79
USP38-201ENST00000307017 ATP5IP56385 69 aaPredicted RBP10.14□□□□□ -0.79
USP38-201ENST00000307017 TMEM14EPQ6UXP3 125 aa10.14□□□□□ -0.79
USP38-201ENST00000307017 TRBV7-1A0A0A6YYK4 115 aa10.14□□□□□ -0.79
USP38-201ENST00000307017 BVES-AS1Q5T3Y7 98 aa10.14□□□□□ -0.79
USP38-201ENST00000307017 IGHG4P01861 327 aa10.13□□□□□ -0.79
USP38-201ENST00000307017 PRSS29PA6NIE9 313 aa10.13□□□□□ -0.79
USP38-201ENST00000307017 K7EP13 123 aa10.13□□□□□ -0.79
USP38-201ENST00000307017 NPYP01303 97 aa10.13□□□□□ -0.79
USP38-201ENST00000307017 CSRP2Q16527 193 aa10.13□□□□□ -0.79
USP38-201ENST00000307017 NKAPP1Q8N9T2 125 aa10.13□□□□□ -0.79
USP38-201ENST00000307017 MGAMO43451 1857 aa10.13□□□□□ -0.79
USP38-201ENST00000307017 SIGLEC8Q9NYZ4 499 aa10.13□□□□□ -0.79
USP38-201ENST00000307017 C2orf66Q6UXQ4 117 aa10.13□□□□□ -0.79
USP38-201ENST00000307017 PCP2Q8IVA1 136 aa10.13□□□□□ -0.79
USP38-201ENST00000307017 DENND4AQ7Z401 1863 aa10.13□□□□□ -0.79
USP38-201ENST00000307017 QRFPP83859 136 aa10.13□□□□□ -0.79
USP38-201ENST00000307017 ZNF503-AS2A6NEH8 195 aa10.12□□□□□ -0.79
USP38-201ENST00000307017 IGLC2P0DOY2 106 aa10.12□□□□□ -0.79
USP38-201ENST00000307017 IGLC3P0DOY3 106 aa10.12□□□□□ -0.79
USP38-201ENST00000307017 E7EQL1 145 aa10.12□□□□□ -0.79
USP38-201ENST00000307017 RBM3P98179 157 aaKnown RBP10.12□□□□□ -0.79
USP38-201ENST00000307017 IGKV1OR2-108A0A075B7D4 117 aa10.12□□□□□ -0.79
USP38-201ENST00000307017 FOXE3Q13461 319 aa10.12□□□□□ -0.79
USP38-201ENST00000307017 TDRG1Q3Y452 100 aa10.12□□□□□ -0.79
USP38-201ENST00000307017 LINC00173Q6ZV60 143 aa10.12□□□□□ -0.79
USP38-201ENST00000307017 LY6G5BQ8NDX9 201 aa10.12□□□□□ -0.79
USP38-201ENST00000307017 SRRM5B3KS81 715 aa10.12□□□□□ -0.79
USP38-201ENST00000307017 K7EN84 100 aa10.12□□□□□ -0.79
USP38-201ENST00000307017 HIST2H2BDQ6DRA6 164 aa10.12□□□□□ -0.79
USP38-201ENST00000307017 M0R1W7 72 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 TAL2Q16559 108 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 ZNF407Q9C0G0 2248 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 MMP23AO75900 390 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 APRG1Q8IVJ8 170 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 ZNF524Q96C55 264 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 ANGP03950 147 aaKnown RBP10.11□□□□□ -0.79
USP38-201ENST00000307017 SMPXQ9UHP9 88 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 A0A1W2PPM0 123 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 GAGE12HA6NDE8 117 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 RPL18AQ02543 176 aaKnown RBP10.11□□□□□ -0.79
USP38-201ENST00000307017 C4orf48Q5BLP8 95 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 DSCR8Q96T75 97 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 FAM186AA6NE01 2351 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 C8orf86Q6ZUL3 223 aa10.11□□□□□ -0.79
USP38-201ENST00000307017 TEX48A0A1B0GUV7 120 aa10.1□□□□□ -0.79
USP38-201ENST00000307017 Q96MF0 132 aa10.1□□□□□ -0.79
USP38-201ENST00000307017 SPRNQ5BIV9 151 aa10.1□□□□□ -0.79
USP38-201ENST00000307017 GHRHP01286 108 aa10.1□□□□□ -0.79
USP38-201ENST00000307017 SHISA9B4DS77 424 aa10.1□□□□□ -0.79
USP38-201ENST00000307017 SCN10AQ9Y5Y9 1956 aa10.1□□□□□ -0.79
USP38-201ENST00000307017 FAM90A9PA6NNJ1 464 aa10.09□□□□□ -0.79
USP38-201ENST00000307017 NOP10Q9NPE3 64 aaKnown RBP10.09□□□□□ -0.79
USP38-201ENST00000307017 TRPT1Q86TN4 253 aaKnown RBP10.09□□□□□ -0.79
USP38-201ENST00000307017 NTN5Q8WTR8 489 aaPredicted RBP10.09□□□□□ -0.79
USP38-201ENST00000307017 NCR3O14931 201 aa10.09□□□□□ -0.79
USP38-201ENST00000307017 HOXB4P17483 251 aaPredicted RBP10.09□□□□□ -0.79
USP38-201ENST00000307017 RPL39LQ96EH5 51 aaKnown RBP10.09□□□□□ -0.79
USP38-201ENST00000307017 TEX22C9J3V5 150 aa10.09□□□□□ -0.79
USP38-201ENST00000307017 I3L3M4 83 aa10.09□□□□□ -0.79
USP38-201ENST00000307017 CD59P13987 128 aa10.09□□□□□ -0.79
USP38-201ENST00000307017 ZMAT4Q9H898 229 aa10.09□□□□□ -0.79
USP38-201ENST00000307017 VWA8A3KMH1 1905 aa10.09□□□□□ -0.79
USP38-201ENST00000307017 NCKAP5O14513 1909 aa10.08□□□□□ -0.8
USP38-201ENST00000307017 SDHAF1A6NFY7 115 aa10.08□□□□□ -0.8
USP38-201ENST00000307017 DEFB1P60022 68 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms