RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ONECUT1Q9UBC0 465 aa11.5□□□□□ -0.57
COL6A2-201ENST00000300527 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
COL6A2-201ENST00000300527 SIVA1O15304 175 aa11.5□□□□□ -0.57
COL6A2-201ENST00000300527 TNFRSF6BO95407 300 aa11.5□□□□□ -0.57
COL6A2-201ENST00000300527 MAPKAPK5-AS1Q8N8E1 139 aa11.5□□□□□ -0.57
COL6A2-201ENST00000300527 SPRY2O43597 315 aa11.5□□□□□ -0.57
COL6A2-201ENST00000300527 ZNF562Q6V9R5 426 aa11.5□□□□□ -0.57
COL6A2-201ENST00000300527 MBD3L4A6NDZ8 208 aaPredicted RBP11.49□□□□□ -0.57
COL6A2-201ENST00000300527 MBD3L3A6NE82 208 aaPredicted RBP11.49□□□□□ -0.57
COL6A2-201ENST00000300527 MBD3L5A6NJ08 208 aaPredicted RBP11.49□□□□□ -0.57
COL6A2-201ENST00000300527 K7EIM0 57 aa11.49□□□□□ -0.57
COL6A2-201ENST00000300527 DPM2O94777 84 aa11.49□□□□□ -0.57
COL6A2-201ENST00000300527 TGFAP01135 160 aa11.49□□□□□ -0.57
COL6A2-201ENST00000300527 ZNF493Q6ZR52 646 aa11.49□□□□□ -0.57
COL6A2-201ENST00000300527 MBD3L2Q8NHZ7 208 aaPredicted RBP11.49□□□□□ -0.57
COL6A2-201ENST00000300527 RIF1Q5UIP0 2472 aaKnown RBP11.49□□□□□ -0.57
COL6A2-201ENST00000300527 SMIM17P0DL12 118 aa11.49□□□□□ -0.57
COL6A2-201ENST00000300527 EFNA4P52798 201 aa11.49□□□□□ -0.57
COL6A2-201ENST00000300527 CD300EQ496F6 205 aaPredicted RBP11.49□□□□□ -0.57
COL6A2-201ENST00000300527 CEND1Q8N111 149 aa11.48□□□□□ -0.57
COL6A2-201ENST00000300527 PRR25Q96S07 402 aa11.48□□□□□ -0.57
COL6A2-201ENST00000300527 SPAG8Q99932 426 aaPredicted RBP11.48□□□□□ -0.57
COL6A2-201ENST00000300527 A0A1B0GV72 72 aa11.48□□□□□ -0.57
COL6A2-201ENST00000300527 IGLL5B9A064 214 aa11.48□□□□□ -0.57
COL6A2-201ENST00000300527 TIMM23O14925 209 aa11.48□□□□□ -0.57
COL6A2-201ENST00000300527 TMEM155Q4W5P6 130 aa11.48□□□□□ -0.57
COL6A2-201ENST00000300527 NCBP2LA6PVI3 153 aaKnown RBP11.48□□□□□ -0.57
COL6A2-201ENST00000300527 RAB9AP51151 201 aa11.48□□□□□ -0.57
COL6A2-201ENST00000300527 TNFRSF14Q92956 283 aa11.48□□□□□ -0.57
COL6A2-201ENST00000300527 CYSLTR1Q9Y271 337 aa11.47□□□□□ -0.57
COL6A2-201ENST00000300527 CKS1BP61024 79 aa11.47□□□□□ -0.57
COL6A2-201ENST00000300527 GAGE13Q4V321 117 aa11.47□□□□□ -0.57
COL6A2-201ENST00000300527 GFRALQ6UXV0 394 aa11.47□□□□□ -0.57
COL6A2-201ENST00000300527 SPANXB1Q9NS25 103 aaPredicted RBP11.47□□□□□ -0.57
COL6A2-201ENST00000300527 LOC107984156A0A0G2JMH3 177 aa11.47□□□□□ -0.57
COL6A2-201ENST00000300527 HOXB4P17483 251 aaPredicted RBP11.47□□□□□ -0.57
COL6A2-201ENST00000300527 ARL17AQ8IVW1 177 aa11.47□□□□□ -0.57
COL6A2-201ENST00000300527 TTC9CQ8N5M4 171 aa11.47□□□□□ -0.57
COL6A2-201ENST00000300527 RNF182Q8N6D2 247 aa11.47□□□□□ -0.57
COL6A2-201ENST00000300527 MYOZ3Q8TDC0 251 aa11.47□□□□□ -0.57
COL6A2-201ENST00000300527 HHLA3Q9XRX5 114 aa11.47□□□□□ -0.57
COL6A2-201ENST00000300527 C16orf97H3BN30 126 aa11.46□□□□□ -0.57
COL6A2-201ENST00000300527 C12orf74Q32Q52 190 aa11.46□□□□□ -0.57
COL6A2-201ENST00000300527 CCDC144NLQ6NUI1 221 aa11.46□□□□□ -0.57
COL6A2-201ENST00000300527 ZNF418Q8TF45 676 aaPredicted RBP11.46□□□□□ -0.57
COL6A2-201ENST00000300527 AKAP6Q13023 2319 aa11.46□□□□□ -0.58
COL6A2-201ENST00000300527 U3KQK5 164 aa11.46□□□□□ -0.58
COL6A2-201ENST00000300527 BUB1B-PAK6H3BSN5 160 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 PRRG2O14669 202 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 CEACAM3P40198 252 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 LINC00311Q8N616 119 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 ATP6V0BQ99437 205 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 TTC28Q96AY4 2481 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 K7EM74 188 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 TRGV3P03979 118 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 BMI1P35226 326 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 FOXI2Q6ZQN5 318 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 DEFB124Q8NES8 71 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 C20orf78Q9BR46 151 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 HIF1ANQ9NWT6 349 aa11.45□□□□□ -0.58
COL6A2-201ENST00000300527 ZNF883P0CG24 379 aa11.44□□□□□ -0.58
COL6A2-201ENST00000300527 PVRIGQ6DKI7 326 aa11.44□□□□□ -0.58
COL6A2-201ENST00000300527 PRAC2D3DTV9 90 aa11.44□□□□□ -0.58
COL6A2-201ENST00000300527 DTX2Q86UW9 622 aa11.44□□□□□ -0.58
COL6A2-201ENST00000300527 RNF185Q96GF1 192 aa11.44□□□□□ -0.58
COL6A2-201ENST00000300527 TNRC18O15417 2968 aaPredicted RBP11.43□□□□□ -0.58
COL6A2-201ENST00000300527 LY6HO94772 140 aa11.43□□□□□ -0.58
COL6A2-201ENST00000300527 KLRD1Q13241 179 aa11.43□□□□□ -0.58
COL6A2-201ENST00000300527 LYPD1Q8N2G4 141 aa11.43□□□□□ -0.58
COL6A2-201ENST00000300527 APOMO95445 188 aa11.43□□□□□ -0.58
COL6A2-201ENST00000300527 CRYGBP07316 175 aa11.43□□□□□ -0.58
COL6A2-201ENST00000300527 DLX6P56179 175 aa11.43□□□□□ -0.58
COL6A2-201ENST00000300527 IL17RELQ6ZVW7 336 aa11.43□□□□□ -0.58
COL6A2-201ENST00000300527 NXT2Q9NPJ8 142 aaKnown RBP11.43□□□□□ -0.58
COL6A2-201ENST00000300527 PTPRZ1P23471 2315 aaPredicted RBP11.43□□□□□ -0.58
COL6A2-201ENST00000300527 MFAP4P55083 255 aa11.43□□□□□ -0.58
COL6A2-201ENST00000300527 NDUFS8O00217 210 aa11.42□□□□□ -0.58
COL6A2-201ENST00000300527 DYNAPQ8N1N2 210 aa11.42□□□□□ -0.58
COL6A2-201ENST00000300527 GATD1Q8NB37 220 aa11.42□□□□□ -0.58
COL6A2-201ENST00000300527 PHLDA1Q8WV24 401 aaPredicted RBP11.42□□□□□ -0.58
COL6A2-201ENST00000300527 RNASE6Q93091 150 aaKnown RBP11.42□□□□□ -0.58
COL6A2-201ENST00000300527 MRPL16Q9NX20 251 aaKnown RBP11.42□□□□□ -0.58
COL6A2-201ENST00000300527 RALYQ9UKM9 306 aaKnown RBP11.42□□□□□ -0.58
COL6A2-201ENST00000300527 FABP5P3A8MUU1 101 aa11.42□□□□□ -0.58
COL6A2-201ENST00000300527 E9PLD3 99 aa11.42□□□□□ -0.58
COL6A2-201ENST00000300527 RPL7P18124 248 aaKnown RBP11.42□□□□□ -0.58
COL6A2-201ENST00000300527 PAX8Q06710 450 aa11.42□□□□□ -0.58
COL6A2-201ENST00000300527 CFAP161Q6P656 301 aa11.42□□□□□ -0.58
COL6A2-201ENST00000300527 SCGB1D4Q6XE38 83 aa11.42□□□□□ -0.58
COL6A2-201ENST00000300527 Q6ZQT7 251 aa11.42□□□□□ -0.58
COL6A2-201ENST00000300527 BDP1A6H8Y1 2624 aa11.42□□□□□ -0.58
COL6A2-201ENST00000300527 F8W1H4 67 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 PSMB2P49721 201 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 SPANXN1Q5VSR9 72 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 PGPEP1Q9NXJ5 209 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 C21orf62Q9NYP8 219 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 TRAV26-1A0A087WT03 109 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 TRBV6-1A0A0K0K1D8 114 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 VSTM5A8MXK1 200 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 OR11H12B2RN74 326 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms