RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 GNG5P63218 68 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 RBMY1FQ15415 496 aaKnown RBP4.73□□□□□ -1.65
CD44-204ENST00000279452 CASC10Q5T4H9 136 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 ZNF767PQ75MW2 155 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 SSX7Q7RTT5 188 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 C1orf158Q8N1D5 194 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 LYPD1Q8N2G4 141 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 STOML3Q8TAV4 291 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 RXFP4Q8TDU9 374 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 TMED6Q8WW62 240 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 VGLL1Q99990 258 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 NIPSNAP3BQ9BS92 247 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 MAP1LC3BQ9GZQ8 125 aa4.73□□□□□ -1.65
CD44-204ENST00000279452 PRKDCP78527 4128 aaKnown RBP4.72□□□□□ -1.65
CD44-204ENST00000279452 TMEM189A5PLL7 270 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 NUPR2A6NF83 97 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 SMIM9A6NGZ8 99 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 A8MTW9 85 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 H7BYZ3 331 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 K7EQM0 130 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 CRXO43186 299 aaPredicted RBP4.72□□□□□ -1.65
CD44-204ENST00000279452 IFNA7P01567 189 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 SEC11BP0C7V7 166 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 RNASE4P34096 147 aaKnown RBP4.72□□□□□ -1.65
CD44-204ENST00000279452 ZNF138P52744 262 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 BTN1A1Q13410 526 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 KIR3DS1Q14943 382 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 ZNF726P1Q15940 193 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 GFI1BQ5VTD9 330 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 ZNF705AQ6ZN79 300 aaPredicted RBP4.72□□□□□ -1.65
CD44-204ENST00000279452 GOLT1AQ6ZVE7 132 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 CCDC28AQ8IWP9 274 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 TMEM256Q8N2U0 113 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 LINC00477Q96M19 166 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 AGPAT4-IT1Q9H0P7 198 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 TMPRSS5Q9H3S3 457 aa4.72□□□□□ -1.65
CD44-204ENST00000279452 YTHDF2Q9Y5A9 579 aaKnown RBP4.72□□□□□ -1.65
CD44-204ENST00000279452 C7orf71A4D174 169 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 UMAD1C9J7I0 102 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 DIRC3C9JPN6 131 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 PRM2P04554 102 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 SPART-AS1P0CW21 52 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 HTN3P15516 51 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 FHITP49789 147 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 TAS2R60P59551 318 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 SUMO1P63165 101 aaKnown RBP4.71□□□□□ -1.66
CD44-204ENST00000279452 CD300CQ08708 224 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 LGALSLQ3ZCW2 172 aaPredicted RBP4.71□□□□□ -1.66
CD44-204ENST00000279452 FAM222AQ5U5X8 452 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 CST9LP1Q5W188 147 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 EIF5AL1Q6IS14 154 aaKnown RBP4.71□□□□□ -1.66
CD44-204ENST00000279452 C9orf47Q6ZRZ4 202 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 C5orf17Q8NAS9 161 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 SFT2D1Q8WV19 159 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 PHLDA1Q8WV24 401 aaPredicted RBP4.71□□□□□ -1.66
CD44-204ENST00000279452 SGK494Q96LW2 274 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 ODF3Q96PU9 254 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 NEU1Q99519 415 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 NDFIP1Q9BT67 221 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 ZNF492Q9P255 531 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 NAGKQ9UJ70 344 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 CELA1Q9UNI1 258 aa4.71□□□□□ -1.66
CD44-204ENST00000279452 KLK5Q9Y337 293 aaPredicted RBP4.71□□□□□ -1.66
CD44-204ENST00000279452 TRAV8-1A0A0A6YYK1 113 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 TEX48A0A1B0GUV7 120 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 RBAKDNA6NC62 111 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 CBY3A6NI87 242 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 SNURFLB1AK76 121 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 GGTLC3B5MD39 225 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 F6UZH7 168 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 RGS13O14921 159 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 TCRAP04437 139 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 H2AFB1P0C5Y9 115 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 NKX2-5P52952 324 aaPredicted RBP4.7□□□□□ -1.66
CD44-204ENST00000279452 DAD1P61803 113 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 Q6ZTC4 211 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 PRNTQ86SH4 94 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 C16orf74Q96GX8 76 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 C20orf144Q9BQM9 153 aa4.7□□□□□ -1.66
CD44-204ENST00000279452 TRAV10A0A0B4J240 114 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 SERTM2A0A1B0GWG4 89 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 A0A1W2PRE2 83 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 IGLL5B9A064 214 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 C11orf94C9JXX5 98 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 TEX46H3BTG2 121 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 DEFB130BP0DP73 79 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 DEFB130AP0DP74 79 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 AZU1P20160 251 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 PPT1P50897 306 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 UBE2G1P62253 170 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 MUC21Q5SSG8 566 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 PRR9Q5T870 116 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 CEMP1Q6PRD7 247 aaPredicted RBP4.69□□□□□ -1.66
CD44-204ENST00000279452 DPPA3Q6W0C5 159 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 SLC51BQ86UW2 128 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 C9orf62Q8N4C0 152 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 CYB561D1Q8N8Q1 229 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 C2CD4CQ8TF44 421 aa4.69□□□□□ -1.66
CD44-204ENST00000279452 TMEM263Q8WUH6 116 aaKnown RBP4.69□□□□□ -1.66
CD44-204ENST00000279452 PYGO2Q9BRQ0 406 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms