RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 V9GYV3 84 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 HLA-DMBP28068 263 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 MRPL14Q6P1L8 145 aaKnown RBP4.65□□□□□ -1.66
VCAN-201ENST00000265077 BRK1Q8WUW1 75 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 RNF5Q99942 180 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 LMO1P25800 156 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 CFHR2P36980 270 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 FDCSPQ8NFU4 85 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 TMEM133Q9H2Q1 129 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 LIME1Q9H400 295 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 TRGV11A0A075B6L2 103 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 PRR19A6NJB7 356 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 NPYP01303 97 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 PYYP10082 97 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 LYPD1Q8N2G4 141 aa4.65□□□□□ -1.66
VCAN-201ENST00000265077 CENPVL3A0A0U1RRI6 287 aa4.65□□□□□ -1.67
VCAN-201ENST00000265077 PATE3B3GLJ2 98 aa4.65□□□□□ -1.67
VCAN-201ENST00000265077 UQCRQO14949 82 aa4.65□□□□□ -1.67
VCAN-201ENST00000265077 CTRLP40313 264 aa4.65□□□□□ -1.67
VCAN-201ENST00000265077 DCTN5Q9BTE1 182 aa4.65□□□□□ -1.67
VCAN-201ENST00000265077 ACYP1P07311 99 aa4.65□□□□□ -1.67
VCAN-201ENST00000265077 BSPH1Q075Z2 132 aa4.65□□□□□ -1.67
VCAN-201ENST00000265077 DTX1Q86Y01 620 aa4.65□□□□□ -1.67
VCAN-201ENST00000265077 NTN5Q8WTR8 489 aaPredicted RBP4.65□□□□□ -1.67
VCAN-201ENST00000265077 IGHV3-35A0A0C4DH35 117 aa4.65□□□□□ -1.67
VCAN-201ENST00000265077 MYMXA0A1B0GTQ4 84 aa4.65□□□□□ -1.67
VCAN-201ENST00000265077 SCRT1Q9BWW7 348 aa4.65□□□□□ -1.67
VCAN-201ENST00000265077 QRFPP83859 136 aa4.65□□□□□ -1.67
VCAN-201ENST00000265077 PRO1854Q9UHT4 67 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 SLC25A15Q9Y619 301 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 PDE6HQ13956 83 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 OVOL1O14753 267 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 TCF15Q12870 199 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 RAI1Q7Z5J4 1906 aaPredicted RBP4.64□□□□□ -1.67
VCAN-201ENST00000265077 IGKV1-5P01602 117 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 CD7P09564 240 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 PCP2Q8IVA1 136 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 LINC01587Q99440 93 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 CFHR1Q03591 330 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 A0A0U1RQV1 116 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 IL15RAQ13261 267 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 DUSP14O95147 198 aaKnown RBP4.64□□□□□ -1.67
VCAN-201ENST00000265077 WNT2P09544 360 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 COX6B1P14854 86 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 RBMY1FQ15415 496 aaKnown RBP4.64□□□□□ -1.67
VCAN-201ENST00000265077 ZNF726P1Q15940 193 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 C3orf22Q8N5N4 141 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 CCL19Q99731 98 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 PLA2G2EQ9NZK7 142 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 MAP1AP78559 2803 aaPredicted RBP4.64□□□□□ -1.67
VCAN-201ENST00000265077 VWC2Q2TAL6 325 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 SPATA31B1PQ5VZV4 182 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 Q6P435 159 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 ZNF474Q6S9Z5 364 aaPredicted RBP4.64□□□□□ -1.67
VCAN-201ENST00000265077 TMEM167AQ8TBQ9 72 aa4.64□□□□□ -1.67
VCAN-201ENST00000265077 RNASE6Q93091 150 aaKnown RBP4.63□□□□□ -1.67
VCAN-201ENST00000265077 LINC00479Q96M42 142 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 TRAV8-3A0A0A6YYJ7 113 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 TCRAP04437 139 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 FXYD2P54710 66 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 TMEM86BQ8N661 226 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 IGKV1-27A0A075B6S5 117 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 SRRM5B3KS81 715 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 ANAPC10Q9UM13 185 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 IGHV3OR16-13A0A075B7E8 117 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 IGHV3-49A0A0A0MS15 119 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 IGHV3-74A0A0B4J1X5 117 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 IGKV3OR2-268A0A0C4DH90 116 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 VCYO14598 125 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 SEC61GP60059 68 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 NRGNQ92686 78 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 OOSP1A8MZH6 123 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 CLEC19AQ6UXS0 136 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 FAM231DQ6ZW35 169 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 IGHV3-66A0A0C4DH42 116 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 U3KQE9 123 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 IGHV3OR16-12A0A075B7B8 117 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 C15orf62A8K5M9 175 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 CHCHD5Q9BSY4 110 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 RPUSD1Q9UJJ7 312 aaKnown RBP4.63□□□□□ -1.67
VCAN-201ENST00000265077 TRBV7-1A0A0A6YYK4 115 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 C9orf106Q8NAJ2 232 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 LINC00527Q9UJ94 153 aa4.63□□□□□ -1.67
VCAN-201ENST00000265077 TNRC6BQ9UPQ9 1833 aaKnown RBP4.62□□□□□ -1.67
VCAN-201ENST00000265077 PEMTQ9UBM1 199 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 A0A1B0GX51 115 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 PAX8Q06710 450 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 SIGLEC15Q6ZMC9 328 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 IGKV3-20P01619 116 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 THBDP07204 575 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 CMC4P56277 68 aaPredicted RBP4.62□□□□□ -1.67
VCAN-201ENST00000265077 ZNHIT1O43257 154 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 CD28P10747 220 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 GATD1Q8NB37 220 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 DPH3P1Q9H4G8 78 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 LAMTOR3Q9UHA4 124 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 S4R3C0 116 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 FGF6P10767 208 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 PMS2P5A8MQ11 134 aa4.62□□□□□ -1.67
VCAN-201ENST00000265077 E9PLD3 99 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms