RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 TMEM14BQ9NUH8 114 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 PTPRFP10586 1907 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 FAM236AA0A1B0GUQ0 79 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 FAM236BA0A1B0GV22 79 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 LINC01565O15544 149 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 ARFGEF1Q9Y6D6 1849 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 TMEM256-PLSCR3K7ERE1 68 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 SAP30O75446 220 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 DMRTC2Q8IXT2 367 aaPredicted RBP4.42□□□□□ -1.7
XRN1-201ENST00000264951 BMPERQ8N8U9 685 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 MRPL35Q9NZE8 188 aaKnown RBP4.42□□□□□ -1.7
XRN1-201ENST00000264951 KLF2Q9Y5W3 355 aaPredicted RBP4.42□□□□□ -1.7
XRN1-201ENST00000264951 OTOGLQ3ZCN5 2332 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 A0A0A6YYD4 124 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 PHF3Q92576 2039 aaKnown RBP4.41□□□□□ -1.7
XRN1-201ENST00000264951 TRAV12-1A0A0B4J245 112 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 PPIFP30405 207 aaKnown RBP4.41□□□□□ -1.7
XRN1-201ENST00000264951 Q6ZWC4 215 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 PRR25Q96S07 402 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 MED13LQ71F56 2210 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 IGLC7A0M8Q6 106 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 ITGBL1O95965 494 aaPredicted RBP4.41□□□□□ -1.7
XRN1-201ENST00000264951 BAALCQ8WXS3 180 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 PATJQ8NI35 1801 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 NDUFA4O00483 81 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 IGHV1-2P23083 117 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 VWC2Q2TAL6 325 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 C8orf86Q6ZUL3 223 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 PIFOQ8TCI5 191 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 DOCK4Q8N1I0 1966 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 CR1LQ2VPA4 569 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 V9GYV3 84 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 ZNF236Q9UL36 1845 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 C5orf63A6NC05 138 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 IGHV3-23P01764 117 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 MRPL51Q4U2R6 128 aaKnown RBP4.41□□□□□ -1.7
XRN1-201ENST00000264951 ANKHD1Q8IWZ3 2542 aaKnown RBP4.41□□□□□ -1.7
XRN1-201ENST00000264951 NDUFC2-KCTD14E9PQ53 114 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 SLC25A45Q8N413 288 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 TTC28Q96AY4 2481 aa4.41□□□□□ -1.7
XRN1-201ENST00000264951 GATA4P43694 442 aa4.4□□□□□ -1.7
XRN1-201ENST00000264951 MRPS36P82909 103 aaKnown RBP4.4□□□□□ -1.7
XRN1-201ENST00000264951 LINC00311Q8N616 119 aa4.4□□□□□ -1.7
XRN1-201ENST00000264951 BUB1B-PAK6H3BSN5 160 aa4.4□□□□□ -1.7
XRN1-201ENST00000264951 RPL15P61313 204 aaKnown RBP4.4□□□□□ -1.7
XRN1-201ENST00000264951 SLC22A18ASQ8N1D0 253 aa4.4□□□□□ -1.7
XRN1-201ENST00000264951 Q8N1Y9 231 aa4.4□□□□□ -1.7
XRN1-201ENST00000264951 SPINK2P20155 84 aa4.4□□□□□ -1.7
XRN1-201ENST00000264951 NTF4P34130 210 aa4.4□□□□□ -1.7
XRN1-201ENST00000264951 SS18L2Q9UHA2 77 aa4.4□□□□□ -1.7
XRN1-201ENST00000264951 IL9P15248 144 aa4.4□□□□□ -1.7
XRN1-201ENST00000264951 ZNF134P52741 427 aa4.4□□□□□ -1.7
XRN1-201ENST00000264951 DAD1P61803 113 aa4.4□□□□□ -1.7
XRN1-201ENST00000264951 PRSS29PA6NIE9 313 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 NDUFS5O43920 106 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 HIGD2BQ4VC39 106 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 PIP4P2Q8N4L2 257 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 ZNF747Q9BV97 191 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 ETDCA0A1B0GVM5 59 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 C22orf46C9J442 243 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 IGLL5B9A064 214 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 IGLC1P0CG04 106 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 GAS1P54826 345 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 A4D1N5 150 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 TMEM178BH3BS89 294 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 KIR2DL5BQ8NHK3 375 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 MYO9AB2RTY4 2548 aa4.4□□□□□ -1.71
XRN1-201ENST00000264951 CASP8AP2Q9UKL3 1982 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 TRBV10-2A0A0K0K1G8 114 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 FOXI1Q12951 378 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 SPAARA0A1B0GVQ0 90 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 PFN2P35080 140 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 Q6ZUT4 128 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 SPACA3Q8IXA5 215 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 ICOSQ9Y6W8 199 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 C2CD3Q4AC94 2353 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 NDUFA4L2Q9NRX3 87 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 MRPL36Q9P0J6 103 aaKnown RBP4.39□□□□□ -1.71
XRN1-201ENST00000264951 IGHV1-46P01743 117 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 LMO1P25800 156 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 DUX4L9Q6RFH8 374 aaPredicted RBP4.39□□□□□ -1.71
XRN1-201ENST00000264951 S4R3C0 116 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 NDUFS7O75251 213 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 RPP25Q9BUL9 199 aaKnown RBP4.39□□□□□ -1.71
XRN1-201ENST00000264951 FREM1Q5H8C1 2179 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 CRYGCP07315 174 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 CELA3AP09093 270 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 ADCYAP1P18509 176 aa4.39□□□□□ -1.71
XRN1-201ENST00000264951 DAZ2Q13117 558 aaKnown RBP4.39□□□□□ -1.71
XRN1-201ENST00000264951 DAZ4Q86SG3 579 aaKnown RBP4.39□□□□□ -1.71
XRN1-201ENST00000264951 DAZ3Q9NR90 486 aaKnown RBP4.39□□□□□ -1.71
XRN1-201ENST00000264951 QRFPP83859 136 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 PRSS57Q6UWY2 283 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 PLXNB1O43157 2135 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 J3QLI3 93 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 CSRP2Q16527 193 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 LYPD6BQ8NI32 183 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 Q8TAT8 98 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 CSRP1P21291 193 aaKnown RBP4.38□□□□□ -1.71
XRN1-201ENST00000264951 Q8TCH9 128 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms