RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 ELOBQ15370 118 aa9.79□□□□□ -0.84
VAMP7-201ENST00000262640 C9orf47Q6ZRZ4 202 aa9.79□□□□□ -0.84
VAMP7-201ENST00000262640 WFDC3Q8IUB2 231 aa9.79□□□□□ -0.84
VAMP7-201ENST00000262640 NDFIP1Q9BT67 221 aa9.79□□□□□ -0.84
VAMP7-201ENST00000262640 SIGLEC8Q9NYZ4 499 aa9.79□□□□□ -0.84
VAMP7-201ENST00000262640 V9GYV3 84 aa9.79□□□□□ -0.84
VAMP7-201ENST00000262640 ERCC8Q13216 396 aa9.79□□□□□ -0.84
VAMP7-201ENST00000262640 TMEM78Q5T7P6 136 aa9.79□□□□□ -0.84
VAMP7-201ENST00000262640 KCNIP4Q6PIL6 250 aa9.79□□□□□ -0.84
VAMP7-201ENST00000262640 COX8CQ7Z4L0 72 aa9.79□□□□□ -0.84
VAMP7-201ENST00000262640 PRR25Q96S07 402 aa9.79□□□□□ -0.84
VAMP7-201ENST00000262640 C2CD3Q4AC94 2353 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 TRAV2A0A0B4J234 112 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 PFN1P07737 140 aaKnown RBP9.78□□□□□ -0.84
VAMP7-201ENST00000262640 SNRPD3P62318 126 aaKnown RBP9.78□□□□□ -0.84
VAMP7-201ENST00000262640 RBPMS2Q6ZRY4 209 aaKnown RBP9.78□□□□□ -0.84
VAMP7-201ENST00000262640 NUDT10Q8NFP7 164 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 OR10J6PQ8NGY7 276 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 NUDT11Q96G61 164 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 ZC2HC1AQ96GY0 325 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 ZNF705GA8MUZ8 300 aaPredicted RBP9.78□□□□□ -0.84
VAMP7-201ENST00000262640 GATCO43716 136 aaKnown RBP9.78□□□□□ -0.84
VAMP7-201ENST00000262640 CT45A10P0DMU9 189 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 TFPI2P48307 235 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 ZNF138P52744 262 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 DEFB114Q30KQ6 69 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 Q8TAT8 98 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 DAZAP1Q96EP5 407 aaKnown RBP9.78□□□□□ -0.84
VAMP7-201ENST00000262640 AGPAT4-IT1Q9H0P7 198 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 PPP1R14DQ9NXH3 145 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 IL36BQ9NZH7 164 aa9.78□□□□□ -0.84
VAMP7-201ENST00000262640 C19orf71A6NCJ1 209 aa9.77□□□□□ -0.85
VAMP7-201ENST00000262640 C8orf49Q96NF6 230 aa9.77□□□□□ -0.85
VAMP7-201ENST00000262640 ASCL2Q99929 193 aa9.77□□□□□ -0.85
VAMP7-201ENST00000262640 NPIPB6E9PJ23 425 aa9.77□□□□□ -0.85
VAMP7-201ENST00000262640 P01737 135 aa9.77□□□□□ -0.85
VAMP7-201ENST00000262640 LINC00477Q96M19 166 aa9.77□□□□□ -0.85
VAMP7-201ENST00000262640 TRBV24-1A0A075B6N3 115 aa9.76□□□□□ -0.85
VAMP7-201ENST00000262640 TGIF2-C20orf24A0A0A6YYL0 155 aa9.76□□□□□ -0.85
VAMP7-201ENST00000262640 TRAV25A0A0B4J276 109 aa9.76□□□□□ -0.85
VAMP7-201ENST00000262640 LINC00322Q6ZN03 302 aaPredicted RBP9.76□□□□□ -0.85
VAMP7-201ENST00000262640 TMEM61Q8N0U2 210 aa9.76□□□□□ -0.85
VAMP7-201ENST00000262640 OR8A1Q8NGG7 326 aa9.76□□□□□ -0.85
VAMP7-201ENST00000262640 GPR61Q9BZJ8 451 aa9.76□□□□□ -0.85
VAMP7-201ENST00000262640 LENEPQ9Y5L5 61 aa9.76□□□□□ -0.85
VAMP7-201ENST00000262640 SETD2Q9BYW2 2564 aaPredicted RBP9.76□□□□□ -0.85
VAMP7-201ENST00000262640 ZNF688P0C7X2 276 aa9.76□□□□□ -0.85
VAMP7-201ENST00000262640 RAB5AP20339 215 aa9.76□□□□□ -0.85
VAMP7-201ENST00000262640 SMUG1Q53HV7 270 aa9.76□□□□□ -0.85
VAMP7-201ENST00000262640 OR4B1Q8NGF8 309 aa9.76□□□□□ -0.85
VAMP7-201ENST00000262640 RPP21Q9H633 154 aaKnown RBP9.76□□□□□ -0.85
VAMP7-201ENST00000262640 CXCL1P09341 107 aa9.75□□□□□ -0.85
VAMP7-201ENST00000262640 CT83Q5H943 113 aa9.75□□□□□ -0.85
VAMP7-201ENST00000262640 PSMG4Q5JS54 123 aa9.75□□□□□ -0.85
VAMP7-201ENST00000262640 BTF3L4Q96K17 158 aa9.75□□□□□ -0.85
VAMP7-201ENST00000262640 PYGO2Q9BRQ0 406 aa9.75□□□□□ -0.85
VAMP7-201ENST00000262640 TRAV9-1A0A075B6T8 112 aa9.75□□□□□ -0.85
VAMP7-201ENST00000262640 PF4P02776 101 aa9.75□□□□□ -0.85
VAMP7-201ENST00000262640 HIST1H1AQ02539 215 aaPredicted RBP9.75□□□□□ -0.85
VAMP7-201ENST00000262640 CD300EQ496F6 205 aaPredicted RBP9.75□□□□□ -0.85
VAMP7-201ENST00000262640 FAM162BQ5T6X4 162 aa9.75□□□□□ -0.85
VAMP7-201ENST00000262640 FAM210BQ96KR6 192 aa9.75□□□□□ -0.85
VAMP7-201ENST00000262640 CITED1Q99966 193 aa9.75□□□□□ -0.85
VAMP7-201ENST00000262640 A0A1W2PPQ1 181 aa9.74□□□□□ -0.85
VAMP7-201ENST00000262640 ZNF705DP0CH99 300 aaPredicted RBP9.74□□□□□ -0.85
VAMP7-201ENST00000262640 ZNF705BP0CI00 300 aaPredicted RBP9.74□□□□□ -0.85
VAMP7-201ENST00000262640 CRIP1P50238 77 aa9.74□□□□□ -0.85
VAMP7-201ENST00000262640 FAM3BP58499 235 aaPredicted RBP9.74□□□□□ -0.85
VAMP7-201ENST00000262640 SPAG8Q99932 426 aaPredicted RBP9.74□□□□□ -0.85
VAMP7-201ENST00000262640 SMIM27A0A1W2PRY6 76 aa9.74□□□□□ -0.85
VAMP7-201ENST00000262640 DEFB1P60022 68 aa9.74□□□□□ -0.85
VAMP7-201ENST00000262640 OR4C46A6NHA9 309 aa9.73□□□□□ -0.85
VAMP7-201ENST00000262640 F6UB75 175 aa9.73□□□□□ -0.85
VAMP7-201ENST00000262640 TSKUQ8WUA8 353 aa9.73□□□□□ -0.85
VAMP7-201ENST00000262640 TRBV7-9A0A0J9YWB2 115 aa9.73□□□□□ -0.85
VAMP7-201ENST00000262640 A8MWL6 223 aa9.73□□□□□ -0.85
VAMP7-201ENST00000262640 SH2D1AO60880 128 aa9.73□□□□□ -0.85
VAMP7-201ENST00000262640 SAP30O75446 220 aa9.73□□□□□ -0.85
VAMP7-201ENST00000262640 CA1P00915 261 aaPredicted RBP9.73□□□□□ -0.85
VAMP7-201ENST00000262640 LINC00482Q8N8I6 264 aa9.73□□□□□ -0.85
VAMP7-201ENST00000262640 TMA7Q9Y2S6 64 aaKnown RBP9.73□□□□□ -0.85
VAMP7-201ENST00000262640 NIPBLQ6KC79 2804 aaeCLIP9.72□□□□□ -0.85
VAMP7-201ENST00000262640 EBLN2Q6P2I7 272 aa9.72□□□□□ -0.85
VAMP7-201ENST00000262640 OR2D3Q8NGH3 330 aa9.72□□□□□ -0.85
VAMP7-201ENST00000262640 A0A0J9YX75 114 aa9.72□□□□□ -0.85
VAMP7-201ENST00000262640 ZNF80P51504 273 aaPredicted RBP9.72□□□□□ -0.85
VAMP7-201ENST00000262640 KRTAP24-1Q3LI83 254 aa9.72□□□□□ -0.85
VAMP7-201ENST00000262640 FOXI2Q6ZQN5 318 aa9.72□□□□□ -0.85
VAMP7-201ENST00000262640 OR2K2Q8NGT1 345 aa9.72□□□□□ -0.85
VAMP7-201ENST00000262640 FAM19A4Q96LR4 140 aa9.72□□□□□ -0.85
VAMP7-201ENST00000262640 FABP5P3A8MUU1 101 aa9.71□□□□□ -0.85
VAMP7-201ENST00000262640 DUSP14O95147 198 aaKnown RBP9.71□□□□□ -0.85
VAMP7-201ENST00000262640 TYMSP04818 313 aa9.71□□□□□ -0.85
VAMP7-201ENST00000262640 RPS10P46783 165 aaKnown RBP9.71□□□□□ -0.85
VAMP7-201ENST00000262640 TCL1AP56279 114 aa9.71□□□□□ -0.85
VAMP7-201ENST00000262640 GFRA4Q9GZZ7 299 aa9.71□□□□□ -0.85
VAMP7-201ENST00000262640 FAM231BA6NCW3 169 aa9.71□□□□□ -0.86
VAMP7-201ENST00000262640 RPL19P84098 196 aaKnown RBP9.71□□□□□ -0.86
VAMP7-201ENST00000262640 ODF3Q96PU9 254 aa9.71□□□□□ -0.86
VAMP7-201ENST00000262640 SAV1Q9H4B6 383 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms